prot_L-elsbetiae_contig6345.15002.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6345.15002.1
Unique Nameprot_L-elsbetiae_contig6345.15002.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length236
Homology
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BLAST of mRNA_L-elsbetiae_contig6345.15002.1 vs. uniprot
Match: D7G3N3_ECTSI (Importin alpha-7 subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N3_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.740e-44
Identity = 88/127 (69.29%), Postives = 99/127 (77.95%), Query Frame = 0 
Query:    1 MVELEEGNALCRREAAWVFLNMCECGHNSQASIVPGIVRNGGILAVCQNLDRDSDAGTSLLVMLSLLFTILDEAAAAAGGSASP-ELAEYVGLVEEASGFDKILALANDHDDMEIYDKAMDIISSFN 126
            MVELEEGNALC+REAAWVFLNMCEC  +   +I+P IV +G I AVC+NL  DSDA T LLVMLSLL+TILDE     GG  S   L+EY  LVEEA GFDKI+ LANDHDDMEIYDKAMDII +F+
Sbjct:    1 MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENLSSDSDAET-LLVMLSLLYTILDE-----GGLGSTLTLSEYTTLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFH 121
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BLAST of mRNA_L-elsbetiae_contig6345.15002.1 vs. uniprot
Match: A0A6H5KJL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL7_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.710e-41
Identity = 89/154 (57.79%), Postives = 103/154 (66.88%), Query Frame = 0 
Query:    1 MVELEEGNALCRREAAWVFLNMCECGHNSQASIVPGIVRNGGILAVCQNLDRDSDAGTS---------------------------LLVMLSLLFTILDEAAAAAGGSASP-ELAEYVGLVEEASGFDKILALANDHDDMEIYDKAMDIISSFN 126
            MVELEEGNALC+REAAWVFLNMCEC  + +A+I+P IV +G I AVC+NL  DSDAG +                           LLVMLSLL+TILDE     GG  S   L+EY  LVEEA GFDKI++LANDHDDMEIYDKAMDII +F+
Sbjct:   88 MVELEEGNALCKREAAWVFLNMCECSGDPRATIIPEIVGHGVIAAVCENLSSDSDAGKASREPVDASAKRLPCTPPSTPPRNPAETLLVMLSLLYTILDE-----GGLGSTLTLSEYTTLVEEAQGFDKIISLANDHDDMEIYDKAMDIIQAFH 236
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6345.15002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3N3_ECTSI1.740e-4469.29Importin alpha-7 subunit, putative n=1 Tax=Ectocar... [more]
A0A6H5KJL7_9PHAE2.710e-4157.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032413Atypical Arm repeatPFAMPF16186Arm_3coord: 88..136
e-value: 6.5E-12
score: 44.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..134
e-value: 1.4E-14
score: 55.4
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6345contigL-elsbetiae_contig6345:140..2835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6345.15002.1mRNA_L-elsbetiae_contig6345.15002.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6345 140..2835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6345.15002.1 ID=prot_L-elsbetiae_contig6345.15002.1|Name=mRNA_L-elsbetiae_contig6345.15002.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
MVELEEGNALCRREAAWVFLNMCECGHNSQASIVPGIVRNGGILAVCQNL
DRDSDAGTSLLVMLSLLFTILDEAAAAAGGSASPELAEYVGLVEEASGFD
KILALANDHDDMEIYDKAMDIISSFNPRDDDDDAVAAEDGGGAASETYTM
PLDEDDAAPPDDRDDHAASRIDGDDDDDDDDEDDNDNDAMSDDCFSDDSF
HRELSGMDGPITPPQQHRPPPPPEMSATPPSSLPRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032413Arm_3
IPR011989ARM-like
IPR016024ARM-type_fold