mRNA_L-elsbetiae_contig101.149.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig101.149.1 vs. uniprot
Match: B5LWA7_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWA7_9PHYC) HSP 1 Score: 253 bits (645), Expect = 1.570e-81 Identity = 120/230 (52.17%), Postives = 167/230 (72.61%), Query Frame = 1 Query: 7 VAKSFDVVDLGSINLAEAKQSKSAAGCKTARIKGPGGKPLLIQTPPMTIPWNIEPRKMDDASSVTANLALSFLGMMEEDVDDDLYNFMNFMRDFDIRIKSILVKTSGALGKKSDERFLDANFKDSIKESSNGNYPPTFQPKIWLNVKDGGDHSMPEDYVMDIKVFNFGGKLLDCGELQKGCTAAAIIEPSYVWCSALGVGITWVAKQVAVKPNTEEKFAFNLSDKFDHLK 696 +AKS+ D+ ++ L++AK SK+ +GCKTA I G + IQTP MT+PW+I P+K+DD S+V A LALSF+ + E D D+++ F NF+ DFDI+IK+++ + G LGK S++ LDA+F+ SIK+S++G YPPTFQ KIWL++K GG S +D+ MD+ VF+ G L E++KGC AAAII PSYVWCSALG+GITWVAKQVA++P E F F L +FD ++ Sbjct: 1 MAKSYADFDISTLKLSQAKTSKANSGCKTAYISAIGCANIAIQTPLMTLPWDIVPKKLDDTSNVRAELALSFMNINEYDPDNEILKFRNFLTDFDIKIKTLVAEMKGVLGKNSEDARLDASFRSSIKDSTSGEYPPTFQSKIWLSLKQGGAPSCVDDFEMDVMVFDMNGAQLSPTEMRKGCPAAAIIVPSYVWCSALGLGITWVAKQVAIQPKGESTFGFTLGSEFDEVR 230
BLAST of mRNA_L-elsbetiae_contig101.149.1 vs. uniprot
Match: Q6XLU5_9PHYC (FirrV-1-I1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLU5_9PHYC) HSP 1 Score: 251 bits (642), Expect = 4.190e-81 Identity = 120/228 (52.63%), Postives = 160/228 (70.18%), Query Frame = 1 Query: 1 MVVAKSFDVVDLGSINLAEAKQSKSAAGCKTARIKGPGGKPLLIQTPPMTIPWNIEPRKMDDASSVTANLALSFLGMMEEDVDDDLYNFMNFMRDFDIRIKSILVKTSGALGKKSDERFLDANFKDSIKESSNGNYPPTFQPKIWLNVKDGGDHSMPEDYVMDIKVFNFGGKLLDCGELQKGCTAAAIIEPSYVWCSALGVGITWVAKQVAVKPNTEEKFAFNLSDKF 684 M K F D+ ++ L+ K SK+ +GCKTA + G + IQTP MT+PW+I P+KMDD S+V L+LSF+GM E D D++L F F+ FD R+K+++ +T+GA+GK S+E L NF+ +IKES+ GNYPPT Q KIWLN+K GG S ED+ MD+ VF+ G ++ ++QKGC AAAI+EPSYVWCSALGVGITWVAKQVAV+P + F FNL +K Sbjct: 1 MTSPKCFYDFDISTVKLSPPKTSKANSGCKTAYLTTTGSMKIAIQTPVMTLPWDIVPKKMDDVSNVRGELSLSFVGMDERDADNELCQFKTFVEHFDERVKALISETNGAMGKNSEETRLGTNFRPTIKESATGNYPPTIQSKIWLNLKQGGSPSSVEDFDMDVMVFDMDGSRINTDQMQKGCPAAAILEPSYVWCSALGVGITWVAKQVAVQPQSVSTFGFNLGNKL 228
BLAST of mRNA_L-elsbetiae_contig101.149.1 vs. uniprot
Match: Q6XM26_9PHYC (FirrV-1-B10 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM26_9PHYC) HSP 1 Score: 247 bits (631), Expect = 3.090e-79 Identity = 117/223 (52.47%), Postives = 162/223 (72.65%), Query Frame = 1 Query: 4 VVAKSFDVVDLGSINLAEAKQSKSAAGCKTARIKGPGGKPLLIQTPPMTIPWNIEPRKMDDASSVTANLALSFLGMMEEDVDDDLYNFMNFMRDFDIRIKSILVKTSGALGKKSDERFLDANFKDSIKESSNGNYPPTFQPKIWLNVKDGGDHSMPEDYVMDIKVFNFGGKLLDCGELQKGCTAAAIIEPSYVWCSALGVGITWVAKQVAVKPNTEEKFAFNL 672 + A F D+ ++ L+ K SK+ GCKTA I G + IQTP MT+PW+I P+K+DD S+V A L+LSF+G+ E+D +++L F +F+ FD +IK+++ +T GA+GK S++ L+A+F+DSIKES+ GNYPPT Q KIWLN+K GG S+ ED+ MD+ VF+ G + ++QKGC AAAI+EPSYVWCSALGVGITWVAKQVA++P + F FNL Sbjct: 13 MAATHFSEFDVSTLKLSPPKTSKANVGCKTAYITAVGSVKIAIQTPIMTLPWDIVPKKLDDVSNVRAELSLSFVGINEDDPENELKKFKDFLSTFDQKIKTLISETHGAMGKNSEDTRLEASFRDSIKESATGNYPPTIQSKIWLNLKQGGSPSIVEDFDMDVMVFDLEGCQIQTDQMQKGCPAAAILEPSYVWCSALGVGITWVAKQVALQPKSASTFGFNL 235
BLAST of mRNA_L-elsbetiae_contig101.149.1 vs. uniprot
Match: Q8QNJ7_ESV1K (EsV-1-76 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNJ7_ESV1K) HSP 1 Score: 145 bits (365), Expect = 1.040e-38 Identity = 88/232 (37.93%), Postives = 129/232 (55.60%), Query Frame = 1 Query: 13 KSFDVVDLGSINLAEAKQSKSAAGCKTARIKGPGGKPLLIQTPPMTIPWNIEPRKMDDASSVTANLALSFLGMMEEDVDDD-LYNFMNFMRDFDIRIKSILVKTSGALGKKS-DERFLDANFKDSIKESSNGNYPPTFQPKIWLNV-KDGGDHSMPEDYVMDIKVFNFGGKLLDCGELQKGCTAAAIIEPSYVWCSALGVGITWVAKQVAVKPN-TEEKFAFNLSDKFDHLK 696 K+F VD +I + K+ G K A + G G+ L+ +TP M IPWN E RK ++ ++ +ALSF GM ++ DD L F NF+ D R+K + V+ L +K+ DE ++A F+ S+K S+N YPPTFQ KI L K+ + E M I VF + EL+ GC A+ I E SYVWC+ + +GI+W+ K V V+P +E +F F D+F +K Sbjct: 12 KTFPDVDFSAIKFDGIRAGKN--GMKFASLVGGNGRRLVAETPAMRIPWNTEIRKSEETGQCSSKIALSFQGMSDDQADDGKLRRFFNFLNGVDERVKELAVQNKSELWQKAMDEGKIEAYFQSSVKASTNDKYPPTFQGKIPLQEGKNPSSEDVNEAMDMKIVVFRKDKTPVSPKELKGGCLASVIAEASYVWCTPMMIGISWIVKFVLVEPKPSETEFQFTDMDEFADIK 241
BLAST of mRNA_L-elsbetiae_contig101.149.1 vs. uniprot
Match: D8LPA8_ECTSI (EsV-1-76 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPA8_ECTSI) HSP 1 Score: 139 bits (349), Expect = 2.780e-36 Identity = 87/238 (36.55%), Postives = 127/238 (53.36%), Query Frame = 1 Query: 13 KSFDVVDLGSINLAEAKQSKSAAGCKTARIKGPGGKPLLIQTPPMTIPWNIEPRKMDDASSVTANLALSFLGMMEEDVDDD-LYNFMNFMRDFDIRIKSILVKTSGALGKKS-DERFLDANFKDSIKESSNGNYPPTFQPKIWLNV-KDGGDHSMPEDYVMDIKVFNFGGKLLDCGELQKGCTAAAIIEPSYVWCSALGVGITWVAKQVAVKPN-TEEKFAFNLSDKFDHLKGESEDN 714 K+F VD +I + K+ G K A + G G+ L+ +TP M IPWN E RK ++ ++ +ALSF GM ++ DD L F NF+ D R+K + + L +K+ D ++A F+ S+K S+N YPPTFQ KI L K+ E M I VF + EL+ GC A+ I E SYVWC+ + +GI+W+ K V V+P +E F F + F +K + DN Sbjct: 12 KTFPDVDFSAIKFDGIRAGKN--GMKFANLVGGNGRRLVAETPAMKIPWNTEIRKSEETGQCSSKIALSFQGMSDDQEDDGKLRRFFNFLNGVDKRVKELAAQNKTELWQKTMDAGKIEAYFQSSVKASTNDKYPPTFQGKIPLQEGKNPSSEDANEAMDMKIVVFRKDKTPVSPRELKGGCLASVIAEASYVWCTPMMIGISWIVKFVLVEPKPSETAFQFTDMEDFADVKDDGSDN 247 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig101.149.1 >prot_L-elsbetiae_contig101.149.1 ID=prot_L-elsbetiae_contig101.149.1|Name=mRNA_L-elsbetiae_contig101.149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp MVVAKSFDVVDLGSINLAEAKQSKSAAGCKTARIKGPGGKPLLIQTPPMTback to top mRNA from alignment at L-elsbetiae_contig101:39076..39795+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig101.149.1 ID=mRNA_L-elsbetiae_contig101.149.1|Name=mRNA_L-elsbetiae_contig101.149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig101:39076..39795+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig101:39076..39795+ >mRNA_L-elsbetiae_contig101.149.1 ID=mRNA_L-elsbetiae_contig101.149.1|Name=mRNA_L-elsbetiae_contig101.149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1440bp|location=Sequence derived from alignment at L-elsbetiae_contig101:39076..39795+ (Laminarionema elsbetiae ELsaHSoW15)back to top |