prot_L-elsbetiae_contig634.14993.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig634.14993.1
Unique Nameprot_L-elsbetiae_contig634.14993.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length180
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig634.14993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 133..156
e-value: 340.0
score: 0.7
coord: 24..48
e-value: 9.6
score: 13.4
coord: 2..23
e-value: 0.49
score: 19.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 2..60
e-value: 1.0E-9
score: 38.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 159..179
score: 4.801
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 26..48
score: 4.585
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 2..23
score: 7.358
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 91..176
e-value: 6.6E-6
score: 27.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..83
e-value: 8.0E-15
score: 56.1
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 2..113
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig634contigL-elsbetiae_contig634:16978..24623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig634.14993.1mRNA_L-elsbetiae_contig634.14993.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig634 14550..24623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig634.14993.1 ID=prot_L-elsbetiae_contig634.14993.1|Name=mRNA_L-elsbetiae_contig634.14993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp
MSLKELDLSSNSLPTLPAGIFSSLVSLKKLCLNGNDGLTFLPEWIFDGLK
ALETLSVHDNPDLLCLPNVPWTVTELKVDDHVGRHCACFDPTCHNYRCDL
NHGHKIDLSSCGLTDGHGDLIKACFDTATQGHLGEIAAISLRNNNLVSPP
ADLLEGIDKIEKLNLEHNCDLKCIPAADE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf