prot_L-elsbetiae_contig6337.14989.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6337.14989.1
Unique Nameprot_L-elsbetiae_contig6337.14989.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length526
Homology
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: A0A6H5J6X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6X1_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 7.960e-85
Identity = 243/556 (43.71%), Postives = 284/556 (51.08%), Query Frame = 0
Query:    1 MAHKYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRAPADARAAALEAAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRAEISRGCGNRPAAEEREEAADNTALD---WECPACTLINSPAVSWCDACGGPRSAAAPAGXXXXXXXXXXXXXXXXXXGGXXXXXSRTGGTAGGVSGREKRPAPTAEAATARARTSRAGAVQN--AAGVRPVNGLSLGGSGXXXXXXXXXXXXXXXXXXXXHSGLSTWTCHECPFRFPNAEERQTCETCGASRHAAKKPAGRSNSINS------SSKSSGGVAVADRGWEQEL-PPWTCGRCTVVNFGTFLLCGTCNAERPF-----GGAGPQEPVTGGGRGAEMSS-----------------GGWAAAQXXXXXXXXXXXXXXXXEGLGSSAAG--------TR---------GSKPAPVARVCRMCTLRNVSEASDCVACGIPFAESEA 505
            +AHK+KV++L EF+P NP LLGLN+NRG KI IRLRP SDEGSF P+E  + T+LHELVHN+I  HSAKF++  D+L  EC+KL REGI+GRNMPFAGDG+ LGGGRAP DARAAAL+AAEK                                       Q R  +S+GC          +A D+ A D   WEC  CTL NS  V+ CDACG  RSA  PAG       XXXXXXXXXXX      X   GGT    +GR+KRPAPT  AA        AG +QN   AG R    ++  G         XXXXXXXXXXX   S   TWTC  CPF FPN  ER+TCE+CGA+R     PA   +          ++ + GG       W  EL P WTC  CTVVN G FL C  C AERP       G             A +SS                  GW AAQ                 G+G +A G        TR          ++P    RVCR+CTLRN  EAS+C ACGIP AESEA
Sbjct:   86 VAHKWKVVLLLEFIPNNPSLLGLNVNRGQKICIRLRPPSDEGSFYPYEFIIGTMLHELVHNQIGPHSAKFYRVLDQLNDECDKLTREGITGRNMPFAGDGQPLGGGRAPNDARAAALKAAEKRQRQQGIMGSGGQRLGGVSGSSPSDAISAAQRAAAAA--QWRHAVSQGCRGHHGCTAGVKA-DDDADDGDHWECGLCTLFNSLTVNACDACGKERSAT-PAGKSVRGRGXXXXXXXXXXX------XXVAGGT---TTGRQKRPAPTTGAAAG------AGRLQNKSTAGAR----MASDGRSVGAPRGGXXXXXXXXXXXRLPSAGRTWTCRSCPFSFPNVSERRTCESCGAARLL---PADAGSGXXXXXXXXXAATAVGGTTGGHTSWGAELLPSWTCEACTVVNPGMFLGCSVCGAERPADEAAEAGXXXXXXXXXXXXXATLSSEWTAEVGXXXXXXXXXXXGWMAAQGSSGGTDCSV-------GVGGAAVGETVGFGGRTRDDPGMESCWSAQPTGETRVCRLCTLRNPPEASNCKACGIPLAESEA 608          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: D7FMC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC5_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 3.670e-81
Identity = 252/539 (46.75%), Postives = 293/539 (54.36%), Query Frame = 0
Query:    1 MAHKYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRAPADARAAALEAAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRAEISRGCGNRPAAEEREEAADNT--ALDWECPACTLINSPAVSWCDACGGPRSAAAPAGXXXXXXXXXXXXXXXXXXGGXXXXXSRTGGTAGGVSGREKRPAPTAEAATARARTSRAGAVQNAAGVRPVN-GLSLGGSGXXXXXXXXXXXXXXXXXXXXHSGLSTWTCHECPFRFPNAEERQTCETCGASRHAAKKPAGRSNSINSSSKSSGGVAV-----ADRGWEQEL-PPWTCGRCTVVNFGTFLLCGTCNAERPFGGAGP---------------QEPVTGGGRGAEMSSGGWAAAQXXXXXXXXXXXXXXXXE----GLGSSAAGTRG------SKPAPVARVCRMCTLRNVSEASDCVACGIPFAESEA 505
            +AHK+KV++L EF+P NPGLLGLN+NRG KI IRLRP SDEGSF P+E  L T+LHELVHN+I  HSAKF++  D+L  EC+KL+REGI+GRNMPFAGDG+SLGGGRAP DARAAAL+A   XXXXXXXXXXXX         XXXXXXXXXXXXXXXXXX     +S+GCG        E+  DN      WEC  CTL NS  V+ CDACG  RSA  P                XXXX  XXXXX                            R  +    ++ AG R  + G S+G          XXXXXXXXXXX   S   TWTC  CPF FPNA ER+TCE+CGA+R     PA   +            A+         W+ EL P WTC  CTVVN G FL C  C AERP   A                  E     GRG  +++GGW AAQ                     G+G       G      ++PA  AR+CR+CTLRN  EASDC ACGIP A+SEA
Sbjct:   41 VAHKWKVVLLLEFIPNNPGLLGLNVNRGQKICIRLRPPSDEGSFYPYEFILGTMLHELVHNQIGPHSAKFYRMLDQLNDECDKLIREGITGRNMPFAGDGQSLGGGRAPEDARAAALKAXXXXXXXXXXXXXXXQRLGGVSGSXXXXXXXXXXXXXXXXXXX--XXVSQGCGGHHGCTAGEKTGDNADDGDHWECGLCTLFNSLTVNACDACGKERSANPPGNSVRDRGAGSSTGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGRLQK----KSTAGARTASDGRSVGAP------RGXXXXXXXXXXXGLPSAGRTWTCRSCPFSFPNASERRTCESCGAARLL---PADAGSGXXXXXXXXXATAIRGTTGGHTSWDAELLPSWTCDACTVVNPGMFLGCSVCGAERPAEEAXXXXXXXXXXXNLATLSSEWTAEVGRGGGVTAGGWMAAQGSSGGTDCSVGVGTADVRETVGIGGRIRDDPGMESWGSAQPAGEARMCRLCTLRNPPEASDCEACGIPLADSEA 564          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: UPI001F5DA817 (DNA-dependent metalloprotease WSS1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DA817)

HSP 1 Score: 129 bits (323), Expect = 2.100e-29
Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    4 KYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRA---PADARAAALEAAEK 122
            K++V VL EF P NP LLGLN+NRG ++++RLRP   +  F+P+E  LDT+LHEL HN    H A+F+K WDELR ECE+L+ +GI+G    F G G+ LGG      P   R AAL AA+K
Sbjct:   43 KWRVKVLSEFSPKNPSLLGLNVNRGAEVKLRLRPDGRDNDFIPYEEVLDTMLHELAHNARGPHDAQFYKLWDELRKECEELISKGITGPGQGFDGTGRRLGGFSVHPPPPSLRQAALSAAQK 164          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: A0A835YTT9_9STRA (WLM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.370e-29
Identity = 64/112 (57.14%), Postives = 76/112 (67.86%), Query Frame = 0
Query:    3 HKYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRAPADARA 114
            H++ V  LEEF P N GLLG+NINR  KI +RLR   D  +  PFE ALD +LHEL H    AHSA F++  D LR ECE LM  GISGRNMP+ G+G++LGGG A  D RA
Sbjct:    9 HEWSVAHLEEFYPSNKGLLGVNINR-TKICVRLREPRDADALYPFELALDIVLHELTHMVHGAHSADFYRLLDALREECEALMTAGISGRNMPWQGEGRALGGGSAARDVRA 119          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: A0A6S7MWI1_LACSI (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A6S7MWI1_LACSI)

HSP 1 Score: 124 bits (312), Expect = 2.860e-28
Identity = 78/228 (34.21%), Postives = 108/228 (47.37%), Query Frame = 0
Query:    3 HKYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGG----GRAPADARAAALEAAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRAEISRGCGNR----PAAEEREEAADNT--------ALDWECPACTLINSPAVSWCDACGGPR 214
            HK+KV +L EF P NP LLGLNIN G ++++RLR  ++E  F P+E  LDT+LHEL HN+   H+A F+   DE+R ECE+LM +GI+G    F   G+ LGG     + P+  R  AL AA+                                        +RR      C ++    P+       + N         A  W+C  CTL+N P +  C+ACG PR
Sbjct:   41 HKWKVNILSEFCPPNPALLGLNINGGAEVKLRLRRQNNEWDFFPYEQILDTMLHELCHNQYGPHNADFYNLLDEIRKECEELMAKGITGTGRGFDLPGRRLGGYFRQQQTPSSLRQKALSAAQNRAQMGTLLPSGPHRLGGDSSMKTALSPVQAAAMAA----ERRLHDDLWCASKSFQEPSGTSEASVSQNISSSEGEPKASSWQCGTCTLLNQPLLLTCEACGTPR 264          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: A0A446Y5B3_TRITD (WLM domain-containing protein n=15 Tax=Triticeae TaxID=147389 RepID=A0A446Y5B3_TRITD)

HSP 1 Score: 123 bits (308), Expect = 8.060e-28
Identity = 62/122 (50.82%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    4 KYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRA---PADARAAALEAAEK 122
            K++V VL EF P NP LLGLN+NRG+++++RLR    +  F+P+E  LDT+LHEL HN    H A+F+K WDELR ECE+L+ +GI+G    F G G+ LGG      P   R AAL AA+K
Sbjct:   43 KWRVKVLSEFSPKNPRLLGLNVNRGVEVKLRLRRDGRDLDFIPYEEVLDTMLHELAHNARGPHDAQFYKLWDELRKECEELVAKGITGPGQGFDGTGRRLGGFSIHPPPPSLRQAALTAAQK 164          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: A0A498IN73_MALDO (Uncharacterized protein n=3 Tax=Maleae TaxID=721813 RepID=A0A498IN73_MALDO)

HSP 1 Score: 125 bits (313), Expect = 1.790e-27
Identity = 63/122 (51.64%), Postives = 81/122 (66.39%), Query Frame = 0
Query:    3 HKYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRAP--ADARAAALEAAEK 122
            H+++V +L EF P NP LLGLN+NRG+ +++RLR  + +  F PF+  LDT+LHEL HN    H AKF+K WDELR ECE+LM +GI+G    F   GK LG  R P  +  R  AL AAEK
Sbjct:   42 HRWRVKILSEFCPNNPRLLGLNVNRGVHVKLRLRRPNRDTDFYPFDQVLDTMLHELCHNVHGPHDAKFYKLWDELRKECEELMAKGITGSGEGFDLPGKRLGFSRPPPLSSLRKTALAAAEK 163          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: M7Z8S1_TRIUA (WLM domain-containing protein n=4 Tax=Triticinae TaxID=1648030 RepID=M7Z8S1_TRIUA)

HSP 1 Score: 121 bits (304), Expect = 2.630e-27
Identity = 61/122 (50.00%), Postives = 81/122 (66.39%), Query Frame = 0
Query:    4 KYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRA---PADARAAALEAAEK 122
            K++V VL EF P NP LLGLN+NRG+++++RLR    +  F+P+E  LDT+LHEL HN    H A+F+K WDELR ECE+L+ +GI+G    F G G+ LGG      P   R A L AA+K
Sbjct:   43 KWRVKVLSEFSPKNPRLLGLNVNRGVEVKLRLRRDGRDLDFIPYEEVLDTMLHELAHNARGPHDAQFYKLWDELRKECEELVAKGITGPGQGFDGTGRRLGGFSIHPPPPSLRQATLTAAQK 164          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: UPI001F5D7973 (DNA-dependent metalloprotease WSS1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D7973)

HSP 1 Score: 122 bits (305), Expect = 6.050e-27
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    4 KYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRA---PADARAAALEAAEK 122
            K++V VL EF P NP LLGLN+NRG+++++RLRP   + +F+P+E  LDT+LHEL H     H A+F+K WDELR ECE+L+ +GI+G    F G G+ LGG      P   R A L AA+K
Sbjct:   43 KWRVKVLSEFSPKNPRLLGLNVNRGVEVKLRLRPHGRDHNFIPYERVLDTMLHELAHIARGPHDAQFYKLWDELRKECEELVSKGITGPGQGFDGAGRRLGGFSIHPPPPSLRQATLSAAQK 164          
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Match: A0A5J9TLP8_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9TLP8_9POAL)

HSP 1 Score: 122 bits (306), Expect = 6.550e-27
Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 0
Query:    3 HKYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESALDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDGKSLGGGRA---PADARAAALEAAEK 122
            HK++V VL EF P NP LLGLN+  G+++++RLR +  +  F+P+E  LDT+LHEL HN+   H A+F+K WDELR ECE+L+ +GI+G    F G G+ LGG      P   R A L AA+K
Sbjct:   42 HKWRVKVLSEFSPRNPRLLGLNVGAGVEVKLRLRRAGRDYDFIPYEEVLDTMLHELCHNQRGPHDAQFYKLWDELRKECEELVSKGITGSGQGFDGTGRRLGGFTVHPPPPSLRQATLAAAQK 164          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6337.14989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6X1_9PHAE7.960e-8543.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMC5_ECTSI3.670e-8146.75Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
UPI001F5DA8172.100e-2951.64DNA-dependent metalloprotease WSS1-like n=1 Tax=Lo... [more]
A0A835YTT9_9STRA4.370e-2957.14WLM domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A6S7MWI1_LACSI2.860e-2834.21Uncharacterized protein n=3 Tax=Lactuca TaxID=4235... [more]
A0A446Y5B3_TRITD8.060e-2850.82WLM domain-containing protein n=15 Tax=Triticeae T... [more]
A0A498IN73_MALDO1.790e-2751.64Uncharacterized protein n=3 Tax=Maleae TaxID=72181... [more]
M7Z8S1_TRIUA2.630e-2750.00WLM domain-containing protein n=4 Tax=Triticinae T... [more]
UPI001F5D79736.050e-2750.00DNA-dependent metalloprotease WSS1-like n=1 Tax=Lo... [more]
A0A5J9TLP8_9POAL6.550e-2748.78Uncharacterized protein (Fragment) n=1 Tax=Eragros... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 478..499
e-value: 0.8
score: 12.6
coord: 189..213
e-value: 9.1E-5
score: 31.8
coord: 325..351
e-value: 2.6
score: 8.6
coord: 387..411
e-value: 0.61
score: 13.6
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 189..215
e-value: 6.8E-7
score: 28.5
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 191..210
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 389..408
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 186..216
score: 9.123
IPR013536WLM domainPFAMPF08325WLMcoord: 2..165
e-value: 6.6E-39
score: 134.0
IPR013536WLM domainPROSITEPS51397WLMcoord: 1..166
score: 33.183
NoneNo IPR availableGENE3D2.20.28.140coord: 184..230
e-value: 4.6E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR46622FAMILY NOT NAMEDcoord: 2..180
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 187..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6337contigL-elsbetiae_contig6337:3336..8322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6337.14989.1mRNA_L-elsbetiae_contig6337.14989.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6337 3336..8340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6337.14989.1 ID=prot_L-elsbetiae_contig6337.14989.1|Name=mRNA_L-elsbetiae_contig6337.14989.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=526bp
MAHKYKVLVLEEFVPGNPGLLGLNINRGMKIRIRLRPSSDEGSFMPFESA
LDTLLHELVHNEISAHSAKFFKKWDELRAECEKLMREGISGRNMPFAGDG
KSLGGGRAPADARAAALEAAEKRKRQQGVMPGGGHRLGGGGDEGLWGAGS
GSAAQRAAAAAQRRAEISRGCGNRPAAEEREEAADNTALDWECPACTLIN
SPAVSWCDACGGPRSAAAPAGAAASAGAASAAGVSCGGGGGSGHGGSRTG
GTAGGVSGREKRPAPTAEAATARARTSRAGAVQNAAGVRPVNGLSLGGSG
SSSSGSGGSGGGGGGGGGGGHSGLSTWTCHECPFRFPNAEERQTCETCGA
SRHAAKKPAGRSNSINSSSKSSGGVAVADRGWEQELPPWTCGRCTVVNFG
TFLLCGTCNAERPFGGAGPQEPVTGGGRGAEMSSGGWAAAQGGGGGAEFT
AGRGAVGEGLGSSAAGTRGSKPAPVARVCRMCTLRNVSEASDCVACGIPF
AESEAAAAAAAAMTGGGGGGGSGASG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR013536WLM_dom
IPR036443Znf_RanBP2_sf