mRNA_L-elsbetiae_contig6331.14982.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE) HSP 1 Score: 114 bits (284), Expect = 3.440e-24 Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 1089 NLEILGTLVEFVPDTQFMFFGAVSRGWRSVWGERPTATSYVTEESSPSLLRYSLENGLPRDCAGVCSAIARLGNLELLKCGREEGCPWDEQT 1364 N+++L ++V FV + QF+FF VSR WR WG RP TS+VTE+SS S LRYS E GLPRD +C+AIARLGNLELL+ R GC W+ T Sbjct: 60 NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLT 151
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Match: D7G3I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I5_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.370e-22 Identity = 106/254 (41.73%), Postives = 140/254 (55.12%), Query Frame = 3 Query: 189 RMYPGGAKLDMKTVHSKSDKILACGSVVSVAEKWCATMQPKAKATFRLKGGKETK-VGPFTMNVVVNEVMYSPATADSAKHARHLATINFLSEVIGSREYPGLESLLAK-------GKAKFSSKFAGGKRKA------------REEKGDGAAXXXXXXXXXXXXXXXXXLAAVDNKMPPHS---GLEDYAKLLHDVVGAHPETLKATQYVASPMKKGYVQGRVNT-----RCTARLIRGSMWTLPGASRPFVE 866 RMYPGGA L+MK+ K S VS A + CA M+PK++ +F K K + PFT+NV VN V YSPATA + K A+ LA+INFL E +G+RE LESL+A+ G A ++ + GK + +G G XXXXXXXXXXXXXXXXX D+ + H+ GL++YA+LLHD+V AHPET Y+ +K Q + RC ARL+R + + A R VE Sbjct: 847 RMYPGGAVLNMKSFKLKQK------SAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLREAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATGXXXXXXXXXXXKGSRGXGGXXXXXXXXXXXXXXXXXXXDNDDDPVAKHALGDGLQNYAQLLHDLVAAHPETPNYASYMFRALKDNASQQKSKLTGKGFRCFARLLRHVVDPVETAKRKEVE 1094
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI) HSP 1 Score: 107 bits (266), Expect = 6.170e-21 Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 1071 ESLALTNLEILGTLVEFVPDTQFMFFGAVSRGWRSVWGERPTATSYVTEESSPSLLRYSLENGLPRDCAGVCSAIARLGNLELLKCGREEGCPW 1352 E++A+TN++I+ L +FV D QF+FF AVSR WR WGER T TS+VT ++P L+YS GL RD C AR GNL+LL+ E+GCPW Sbjct: 16 ENVAMTNMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLARDGVDWCLTTARAGNLDLLRWATEQGCPW 109
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE) HSP 1 Score: 102 bits (253), Expect = 3.510e-20 Identity = 50/99 (50.51%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 1071 ESLALTNLEILGTLVEFVPDTQFMFFGAVSRGWRSVWGERPTATSYVTEESSPSLLRYSLENGLPRDCAGVCSAIARLGNLELLKCGREEGCPWDEQTC 1367 E L N+ +L L EFV D Q +FF +VSRGWR VWG+RPT T +T ++S L S E GL R A VC +A LG L+LL+ R GCPW+E TC Sbjct: 18 EDLVTANVYLLSYLAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAA-VCETVAGLGRLDLLQRARAMGCPWNENTC 115
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.270e-19 Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 1092 LEILGTLVEFVPDTQFMFFGAVSRGWRSVWGERPTATSYVTEESSPSLLRYSLENGLPRDCAGVCSAIARLGNLELLKCGREEGCPWDEQTC 1367 ++I+ T+ EFV D Q++FF +VSRGWR VWG+RPT T +T ++S S L S E GL R A VC +A LG L+LL+ R GCPW+E TC Sbjct: 9 VDIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAA-VCETVAGLGRLDLLRRARAMGCPWNENTC 99
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.380e-19 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 1092 LEILGTLVEFVPDTQFMFFGAVSRGWRSVWGERPTATSYVTEESSPSLLRYSLENGLPRDCAGVCSAIARLGNLELLKCGREEGCPWDEQTC 1367 ++I+ T+ EFV D Q++FF +VSRGWR VWG+RPT T +T ++S L S E GL R A VC +A LG L+LL+ R GC W+E TC Sbjct: 7 VDIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAA-VCETVAGLGRLDLLRRARAMGCQWNENTC 97
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 3.390e-17 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 1095 EILGTLVEFVPDTQFMFFGAVSRGWRSVWGERPTATSYVTEESSPSLLRYSLENGLPRDCAGVCSAIARLGNLELLKCGREEGCPWDEQTC 1367 +++ EFV D QF+FF +VSR WR W RPT+T +T ++SPS LR+S++ GL VC+AIA LG L+LL+ R G WD+ TC Sbjct: 10 DVISHASEFVHDDQFLFFASVSRAWRGAWRGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALGFRWDKMTC 100 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6331.14982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6331.14982.1 >prot_L-elsbetiae_contig6331.14982.1 ID=prot_L-elsbetiae_contig6331.14982.1|Name=mRNA_L-elsbetiae_contig6331.14982.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=569bp MSQRAKETVEELQRMYPGGAKLDMKTVHSKSDKILACGSVVSVAEKWCATback to top mRNA from alignment at L-elsbetiae_contig6331:115..8168- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6331.14982.1 ID=mRNA_L-elsbetiae_contig6331.14982.1|Name=mRNA_L-elsbetiae_contig6331.14982.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8054bp|location=Sequence derived from alignment at L-elsbetiae_contig6331:115..8168- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6331:115..8168- >mRNA_L-elsbetiae_contig6331.14982.1 ID=mRNA_L-elsbetiae_contig6331.14982.1|Name=mRNA_L-elsbetiae_contig6331.14982.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3414bp|location=Sequence derived from alignment at L-elsbetiae_contig6331:115..8168- (Laminarionema elsbetiae ELsaHSoW15)back to top |