prot_L-elsbetiae_contig6330.14981.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6330.14981.1
Unique Nameprot_L-elsbetiae_contig6330.14981.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length107
Homology
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BLAST of mRNA_L-elsbetiae_contig6330.14981.1 vs. uniprot
Match: D7G6G4_ECTSI (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G4_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.760e-31
Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 0 
Query:    1 VETRGFKLARLEASYEEVKVQCEEHAQRASALEVELSSLKESARTAALQHKATESKLRLQVGDAEDRVAEVLRRAESERRDAKDDASSLREQLETLRRGQQ 101
            VE+ GFKL RLE SY+E+K +C +HAQRAS +EVELS+LKES+R +ALQHK+TE+KLRLQ+G+AEDR AE LRR E ERR+AKD  SSL+EQL+ LRRG Q
Sbjct: 1085 VESLGFKLTRLETSYQELKAKCHQHAQRASEVEVELSTLKESSRASALQHKSTEAKLRLQLGEAEDRAAEALRRLEGERREAKDTTSSLKEQLDALRRGGQ 1185
[Close]
BLAST of mRNA_L-elsbetiae_contig6330.14981.1 vs. uniprot
Match: A0A6H5K2Z4_9PHAE (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z4_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 9.970e-30
Identity = 68/101 (67.33%), Postives = 86/101 (85.15%), Query Frame = 0 
Query:    1 VETRGFKLARLEASYEEVKVQCEEHAQRASALEVELSSLKESARTAALQHKATESKLRLQVGDAEDRVAEVLRRAESERRDAKDDASSLREQLETLRRGQQ 101
            VE+ GFKL RLE S EE+K +C++HAQRAS +EVELS+LKES+R +AL+HK+TE+KLRLQ+G+AEDR AE LRR E ERR++KD  SSL+EQL+ LRRG Q
Sbjct: 1078 VESLGFKLTRLETSNEELKAKCDQHAQRASEVEVELSTLKESSRASALKHKSTEAKLRLQLGEAEDRAAEALRRLEGERRESKDITSSLKEQLDALRRGGQ 1178
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6330.14981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6G4_ECTSI1.760e-3169.31TMF_TATA_bd domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5K2Z4_9PHAE9.970e-3067.33TMF_TATA_bd domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..42
NoneNo IPR availableCOILSCoilCoilcoord: 65..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6330contigL-elsbetiae_contig6330:3412..7560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6330.14981.1mRNA_L-elsbetiae_contig6330.14981.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6330 3401..7560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6330.14981.1 ID=prot_L-elsbetiae_contig6330.14981.1|Name=mRNA_L-elsbetiae_contig6330.14981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
VETRGFKLARLEASYEEVKVQCEEHAQRASALEVELSSLKESARTAALQH
KATESKLRLQVGDAEDRVAEVLRRAESERRDAKDDASSLREQLETLRRGQ
QGGRGG*
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