prot_L-elsbetiae_contig6323.14968.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6323.14968.1
Unique Nameprot_L-elsbetiae_contig6323.14968.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length350
Homology
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: D7G3D1_ECTSI (Rad21_Rec8_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3D1_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 4.770e-114
Identity = 237/371 (63.88%), Postives = 266/371 (71.70%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSMSMVSGQDRNGSFML---DVDMS-FGGNGSDMNMS---SRLSMGGRSRSSRVSDIEAVRDADNSGLRPGRLSVSMDVMATDNMGDKDEGQMDGGYDDLGPPTHPNELALDADMGDEGPRGIDDAADMMDVGGGGGE-FDGPEYDAPEFNPDMDD-LGQGGDADGTNEGGGAVPLDDEDTLNLDDAGFSRTDLPAGGGVDQA-QEXXXXXXXXXXXXXXXXXXXXXXRKRKLVMNQVTLIDMASMKAQLQ 350
            ENILQPTVPLALRMSGHLLLGLVRIY   +              ++AFRPGATDMP GATVAAPGAIEAQGFGEFD++GMDGV +DVFSNAFAV   DNWME AP NL RR DI L DPA++MS +SGQDRNGSFML    +D S FGG G+    +   SR+SM   SR SRVSDIEAVRD DNS LR G LS+SMDVMA D      EGQMDGGYDDLGPPTHPNELA   D+G  G R +DDAA+MMD G  GG+ FD PE DAPEFNPDM++ LGQGG+  G     GAV LDD DTL+ DDAGFSR++LP  GG + A  +               XXXX  XRKRKLV++QVTLIDMA+MKAQLQ
Sbjct:   42 ENILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQMAFRPGATDMPTGATVAAPGAIEAQGFGEFDELGMDGVHVDVFSNAFAV---DNWMEEAPANLARRTDITLTDPAENMSSISGQDRNGSFMLGESSMDFSPFGGGGAXXXXAGSESRMSMDRSSRVSRVSDIEAVRDGDNSRLRSGHLSMSMDVMAAD------EGQMDGGYDDLGPPTHPNELA---DIG--GGRELDDAAEMMDFGNDGGDGFDEPEVDAPEFNPDMEEHLGQGGE--GEEVLPGAVQLDD-DTLDFDDAGFSRSELPPVGGAEAAVDQSDGEPQEEEDHEPKVXXXXTRXRKRKLVLDQVTLIDMATMKAQLQ 395          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: H3GTZ6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTZ6_PHYRM)

HSP 1 Score: 83.2 bits (204), Expect = 8.280e-14
Identity = 62/177 (35.03%), Postives = 87/177 (49.15%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSMSMVSGQDRNGSFMLDVDMSFGGNGSDMNMSSRLSMGGRSRSSRVSDIEAVRDAD 166
            ++I+ P VPLALR+SGHLLLG+VRIY   +              +LAFRPG  D+P     AA  AI    FGEF+        +    +A AV  +D W+ A+   + RR DI L DP D +   +      + +++     GGN    ++       G   S+ VSDIE  R+AD
Sbjct:   42 QDIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYADCSEALVKIKLAFRPGVVDLPQANQQAAASAINVSNFGEFE------AEVTYTIDALAVPSLDEWIAASSQTMARRQDITLADPLDRIREENAFAERDAIVMEDSFGEGGNWQAFDLDDNFGSSGLDMSA-VSDIEVAREAD 211          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: A0A2P4XFU8_9STRA (Double-strand-break repair protein rad21 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XFU8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 9.110e-14
Identity = 68/190 (35.79%), Postives = 91/190 (47.89%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSM---------SMVSGQDRNGS----FMLDVDMSFGGNGSDMNMSSRLSMGGRSRSSRVSDIEAVRDAD 166
            ENI+ P VPLALR++GHLLLG+VRIY   +              +LAFRPGA D+PA    AA   I    FGEF+        +    +A AV  +D W+ A+   + RR DI L DP D +           ++ +D  G        D+D +FG +G D+              S VSDIE  R+AD
Sbjct:   42 ENIMNPQVPLALRVTGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGAVDLPASNQQAASHTINVSNFGEFE------AEVTYSIDAIAVPSLDEWIAASSQTMARRQDITLADPLDRIREENAFAERDAIAMEDSFGGEGDWHAFDLDDNFGNSGLDI--------------STVSDIEVAREAD 211          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: A0A2P4YM93_9STRA (Double-strand-break repair protein rad21 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YM93_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.290e-13
Identity = 68/190 (35.79%), Postives = 91/190 (47.89%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSM---------SMVSGQDRNGS----FMLDVDMSFGGNGSDMNMSSRLSMGGRSRSSRVSDIEAVRDAD 166
            ENI+ P VPLALR++GHLLLG+VRIY   +              +LAFRPGA D+PA    AA   I    FGEF+        +    +A AV  +D W+ A+   + RR DI L DP D +           ++ +D  G        D+D +FG +G D+              S VSDIE  R+AD
Sbjct:  226 ENIMNPQVPLALRVTGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGAVDLPASNQQAASHTINVSNFGEFE------AEVTYSIDAIAVPSLDEWIAASSQTMARRQDITLADPLDRIREENAFAERDAIAMEDSFGGEGDWHAFDLDDNFGSSGLDI--------------STVSDIEVAREAD 395          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: M4B629_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B629_HYAAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.430e-13
Identity = 70/187 (37.43%), Postives = 88/187 (47.06%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSMSM----------VSGQDRNGSFMLDVDMSFGGNGSDMNMSSRLSMGGRSRSSRVSDIEAVRDAD 166
            + I+ P VPLALR+SGHLLLG+VRIY   +              +LAFRPGA D+PA    AAP  I    FGEF+        +     A AV  +D WM A+   + RR DI L DP D  S+            G D +     D+D +FG  G D              +S VSDIE  R+AD
Sbjct:   42 QCIVHPQVPLALRVSGHLLLGVVRIYSRKVKYLYSDCSDALVKMKLAFRPGAVDLPATTQQAAPHTINVAHFGEFE------AEVTYSIEAIAVPTLDEWMAASSQTMARRRDITLADPLDRNSLERDAISMEDSFGGGDGSDWQAFDLDDNFGSFGLD--------------ASAVSDIEIAREAD 208          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: A0A835YLD5_9STRA (Rec8 like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD5_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.220e-13
Identity = 90/252 (35.71%), Postives = 120/252 (47.62%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVF--SNAFAVEGVDNWMEAAPVNLGRRA-------DINLDPADSMSMVSGQDRNGSFMLD--VDMSFGGNGSDMNMSSRLSMGGRSRSSRVSDIEAVRDA--DNSGLRPG-RLSVSMDVM-ATDNMGDKDEGQMDGGYDDLGP--PTHPNEL------ALDADMGD 219
            ++I+ P VPLALR+SGHLLLG+VRIY   +              ++AFRPG  D+P GA+ A   AI   G+GEFD     G     F      ++   D WM AA + + R         DI L   +S++++    R+     D  +D+S GG GS        +   R   SRVSDIE +RD   D S LR   R S+ +    +T   GD D  +    YDDLG   PT P E       A  AD+GD
Sbjct:   42 DSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDPESLALLGSARRSSGGFGDGWMDVS-GGPGS-------AAGSARKGDSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTER----YDDLGEGMPTLPAEFLEEEGGAAAADLGD 281          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: A0A7R9Y943_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y943_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.740e-13
Identity = 84/257 (32.68%), Postives = 112/257 (43.58%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDV--GMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINLDPADSM---SMVSGQDRNGSFMLDVDMSFGGNGSDMNMSSRLSMGGRSRSSRVSDIEAVRDADNSGL-RPGRLSVSMDVMATDNMGDKDEGQMDGGYDDLGPPTHPNELALDADM----------GDEGPRGIDDAADM 231
            E+I  P VPLALR+SGHLLLG+VRIY   +              ++AFRPG  D+P G   AA   +    FG FD        +S+D      A+  VD W+  A +   RR DI LD ++ M      S   R G+ +   D++                     S R+SDIE  RD   S L  P RLS+ +  M  D +   DE  MD        P  P+EL L+ D           GD+ P  +DD + M
Sbjct:   42 ESIANPGVPLALRVSGHLLLGVVRIYSRKVNYLMTDCSEALSKLKMAFRPGVIDLPPGQLTAAQSQLNVGDFGVFDQSFDTQGSISLD------ALPQVDAWLTKAGMTTARREDITLDESELMLDAPSYSSSSRTGTPLSARDLN---------------------SRRISDIEFARDGSRSSLGTPIRLSLDLPEMGMD-LAPVDE-DMDXX------PVQPDELVLETDANAMEEGLELEGDDAPLPVDDVSRM 263          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: D0NDK6_PHYIT (Double-strand-break repair protein rad21 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NDK6_PHYIT)

HSP 1 Score: 80.9 bits (198), Expect = 4.760e-13
Identity = 72/206 (34.95%), Postives = 100/206 (48.54%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSMSMVSG-QDRNGSFMLDVDMSFGGNGSD---MNMSSRLSMGGRSRSSRVSDIEAVRDADNSGLRPGRLSVSMDVMATDNMGDKD 191
            ++IL P VPLALR+SGHLLLG+VRIY   +              +LAFRPG  D+PA    AA  +I    FGEF+        +     A A   +D W+ A+   L RR DI L DP D +   +G  +R+   ++ ++ SFGG   D    ++       G   S+ VSD+E  R+AD          + +D     N GDKD
Sbjct:   42 QSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGVVDLPANNQQAASHSINVSNFGEFE------AEVTYSIEAIAAPSLDEWIAASSQTLARRQDITLADPLDKVREANGFAERD---VIAMEDSFGGGEEDWQAFDLDDNFGSSGLDISA-VSDVEMAREAD-------APMLPLDDSGILNAGDKD 230          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: A0A6A3TN23_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TN23_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.800e-13
Identity = 86/252 (34.13%), Postives = 117/252 (46.43%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSMSMVSG-QDRNGSFMLDVDMSFGGN---GSDMNMSSRLSMGGRSRSSRVSDIEAVRDADNSGLRPGRLSVSMDVMATDNMGDKDEGQMDGGYDDLGPPTHPNELALDADMGDEGPRGIDDAADMMDVGGG 237
            ++I+ P VPLALR+SGHLLLG+VRIY   +              +LAFRPG  D+PA +  AA  AI    FGEF+        +     A  V  +D W+ A+   + RR DI L DP D +   +   +R+G  M D   SFGG      D++ +  L +      S VSDIE  R+AD   L    L  S  + A D   D+     DG   + G    P E+  D  +  E P       D M++ GG
Sbjct:   42 QSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYADCSEALVKIKLAFRPGVVDLPAASQQAASHAINVSNFGEFE------AEVTYSIEAITVPSLDEWVAASSQTVARRQDITLADPLDRIRESNAFAERDGIAMED---SFGGGDWQAFDLDDNFGLDV------STVSDIEVAREADAPVLP---LDDSGIINAGDKSTDRSSLVTDGEQPEFGFNEAPFEMPADNGLEVENP-----VEDPMNISGG 270          
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Match: A0A0W8DYG3_PHYNI (Double-strand-break repair protein rad21 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DYG3_PHYNI)

HSP 1 Score: 80.1 bits (196), Expect = 8.730e-13
Identity = 86/260 (33.08%), Postives = 118/260 (45.38%), Query Frame = 0
Query:    4 ENILQPTVPLALRMSGHLLLGLVRIYPAPLP-------------RLAFRPGATDMPAGATVAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGRRADINL-DPADSMSMVSG-QDRNGSFMLDVDMSFGGNGS--DMNMSSRLSMGGRSRSSRVSDIEAVRDADNSGLRPGRLSVSMDVMATDNMGDK---------DEGQMDGGYDDLGPPTHPNELALDADMGDEGPRGIDDAADMMDVGGG 237
            ++IL P VPLALR+SGHLLLG+VRIY   +              +LAFRPG  D+PA    AA   I    FGEF+        +    +A     +D W+ A+   + RR DI L DP D     +G  +R+   ++ ++ SFGG G     ++       G   S+ VSD+E  R+AD          V +D     N GDK         +  Q + GY+D      P E+ +D  M  E P       D MDV GG
Sbjct:   42 QSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHTINVSNFGEFE------AEVTYSIDAITAPSLDEWIAASSQTVARRQDITLADPLDRTREANGFAERD---VIAMEDSFGGEGDWQAFDLDDNFGSSGLDIST-VSDVEIAREAD-------APMVPLDDSGILNAGDKLTDRSSLMAEAEQPEFGYNDA-----PFEIPVDNAMXIENP-----IXDPMDVSGG 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6323.14968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D1_ECTSI4.770e-11463.88Rad21_Rec8_N domain-containing protein n=2 Tax=Ect... [more]
H3GTZ6_PHYRM8.280e-1435.03Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2P4XFU8_9STRA9.110e-1435.79Double-strand-break repair protein rad21 n=1 Tax=P... [more]
A0A2P4YM93_9STRA1.290e-1335.79Double-strand-break repair protein rad21 n=1 Tax=P... [more]
M4B629_HYAAE1.430e-1337.43Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A835YLD5_9STRA2.220e-1335.71Rec8 like protein-domain-containing protein n=1 Ta... [more]
A0A7R9Y943_9STRA2.740e-1332.68Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D0NDK6_PHYIT4.760e-1334.95Double-strand-break repair protein rad21 n=2 Tax=P... [more]
A0A6A3TN23_9STRA4.800e-1334.13Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0W8DYG3_PHYNI8.730e-1333.08Double-strand-break repair protein rad21 n=11 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006910Rad21/Rec8-like protein, N-terminalPFAMPF04825Rad21_Rec8_Ncoord: 3..29
e-value: 7.8E-7
score: 29.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6323contigL-elsbetiae_contig6323:673..9639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6323.14968.1mRNA_L-elsbetiae_contig6323.14968.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6323 673..9639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6323.14968.1 ID=prot_L-elsbetiae_contig6323.14968.1|Name=mRNA_L-elsbetiae_contig6323.14968.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=350bp
MLLENILQPTVPLALRMSGHLLLGLVRIYPAPLPRLAFRPGATDMPAGAT
VAAPGAIEAQGFGEFDDVGMDGVSIDVFSNAFAVEGVDNWMEAAPVNLGR
RADINLDPADSMSMVSGQDRNGSFMLDVDMSFGGNGSDMNMSSRLSMGGR
SRSSRVSDIEAVRDADNSGLRPGRLSVSMDVMATDNMGDKDEGQMDGGYD
DLGPPTHPNELALDADMGDEGPRGIDDAADMMDVGGGGGEFDGPEYDAPE
FNPDMDDLGQGGDADGTNEGGGAVPLDDEDTLNLDDAGFSRTDLPAGGGV
DQAQEEKEEEEEEEEDEPSARPKPPRTRKRKLVMNQVTLIDMASMKAQLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006910Rad21_Rec8_N