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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 339 |
| Cds size | 339 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816696.7651782-CDS-L-elsbetiae_contig6318:7596..7738 | 1622816696.7651782-CDS-L-elsbetiae_contig6318:7596..7738 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6318 7597..7738 - |
| 1691683747.3164852-CDS-L-elsbetiae_contig6318:7596..7738 | 1691683747.3164852-CDS-L-elsbetiae_contig6318:7596..7738 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6318 7597..7738 - |
| 1622816696.7760034-CDS-L-elsbetiae_contig6318:9265..9395 | 1622816696.7760034-CDS-L-elsbetiae_contig6318:9265..9395 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6318 9266..9395 - |
| 1691683747.3337157-CDS-L-elsbetiae_contig6318:9265..9395 | 1691683747.3337157-CDS-L-elsbetiae_contig6318:9265..9395 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6318 9266..9395 - |
| 1622816696.7862904-CDS-L-elsbetiae_contig6318:9699..9766 | 1622816696.7862904-CDS-L-elsbetiae_contig6318:9699..9766 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6318 9700..9766 - |
| 1691683747.3512497-CDS-L-elsbetiae_contig6318:9699..9766 | 1691683747.3512497-CDS-L-elsbetiae_contig6318:9699..9766 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6318 9700..9766 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6318.14961.1 >prot_L-elsbetiae_contig6318.14961.1 ID=prot_L-elsbetiae_contig6318.14961.1|Name=mRNA_L-elsbetiae_contig6318.14961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp
GPPRFPIRKGCTRPVQQEVLQREWDKLGPEEKAIRRAQRARSGERCTQCG
CVGYFRRNCPMCPPVRFDVRRDRWRLLSAEEIHKSAMQRGSLARTGEDPP
TSIQLAGPASGTK back to topmRNA from alignment at L-elsbetiae_contig6318:7597..9766- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6318.14961.1 ID=mRNA_L-elsbetiae_contig6318.14961.1|Name=mRNA_L-elsbetiae_contig6318.14961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2170bp|location=Sequence derived from alignment at L-elsbetiae_contig6318:7597..9766- (Laminarionema elsbetiae ELsaHSoW15)
GGCCCACCGCGCTTTCCGATTCGAAAAGGATGCACCCGTCCCGTTCAGCA
GGAAGTCCTCCAACGAGGTGATATATAGGCGTACAGGAGGCACCATATTG
TGCCCGATTTGAATTTGGAAGCACGTCCTTGTACTGACATGCGCGTCCCA
AGGAAAGGGTGTCGGTTCCCTGTCTCTATATTGTAGATATGTAGTAGCGA
ACCACCGTAATATGACTCGATCACAAATGTGCATGTTTTGCGAGCAATAC
CTACCACCTTCGTACATCACTTCCCTCAACCTCACAATATGATAACCCCT
TCTCTTCCGTTAAGGCAGCAGGCACCTATCAGTCAAATCTCAACGCGCTT
GATTATTTCCTCCAAATACAGAATGGGACAAGCTCGGTCCCGAAGAAAAG
GCCATACGGCGGGCGCAGCGAGCGAGGAGCGGAGAGCGCTGCACACAGTG
CGGATGCGTCGGATACTTCCGTCGAAACTGCCCCATGTGCCCCCCAGTTA
GGTGTGTAGCTCCGACGTCGCCAGCTCTCACGAAGTACTATAGCTAAGAA
CGAGGAACATAGATTCTTCATTCTTACGACGCTGCCGCATGGCGCTTAAT
CAAGCCCAATCCGCACAGAATCATGCAGAGCCGCAAAACTATCACGCTGT
GAACATCTTCCAATTGAAAAACTTCACTGCCATTTCAAAACGAGGTTGCC
GCCACTGCTGAGGTCGCCGGTGGTTGCTCTGAGACACTATTCAAGCACAC
CTGTGTGTCTCCTCGTAGCCTCTCGTTGGGCGCGAAAGTTGTGGTGTGCG
CCACCATGGGCTAAGGTCGGAGTTAGGTCGCACTTTCACAGCAGTGGACT
AGACCAAACCTTCCAAAAACGCTACTTCGGCACTCCGCCACTCGAGACCC
AAGGGCCCATTCGACGCCTGCCCCCCGGCTATGGTACTCTTTTGGGATGC
CTTTCGGCATATCTGCTTAACCTAGCGGCCAAGGAGATGGCGCATCATTT
TTTGAACATTTTCGGGCAGCTTCGATCGAATCAAGACTTTAATGCCTCTA
TTGTAACATCAGGACAATTAATTTTCCCAAATGGTCAACAAAACCAGGGG
ACGCTAGAGGGCCGGTGAGAGTGGGCGGCCTTAAGGGTACGGTGAGGGGT
ACCCATTGATCAGTGAAGGCCTTTCTGGAAGAATATTCGCACACCCCCGT
TGAACATCACGGGGCCTCACCTAAAATTTGTGTTGGCTTTCCAAAAACGC
CCGCCTACAGTGCTGCGAAATAACAGAGGAGTTCCGAGATGGTCGGCTCT
TCTTTGCCGTGTTTGCGGAACTTTTTTTACCCACCCTTTTCGTGTCTGAA
CTGTGAGGTCCGTACAAAATTGCTGAGCATACCCTCCTCTATTCCACACT
TTTTCAAAACAATCGGGCTACATTCGCGTCAAGTCCGTTTCTTGACAGAG
GAAAAAACCACGGCGTGGGGCTCCGGGGCGTGGCTTGAAATGTTCACCCG
ATTAACCGAAAAAAGAGCGGTTGGATAAATGGTTCGTGCCCACCAGAACA
TCGAAAGCAAGTCTAACCGCGTATTGTAGCGGTTGGCCGTCTTCCAGCGG
TCGTTTCAAGGCACTCCGAATCGAACTCTCTGGCCGTTCTGCTGAGCGCA
AGACCTACGCCGAAAAACACCACAGTGATGGAGTTAACTCCGTGTAAAAG
CAGAACAGATTCCCGGCTACGGAGTTTGGCGTCGAATATTTTGGCAACAG
GAAGGTCGCTGAAACATTGATCCGATGTGAGAGAACTTTGAGGGAACTTT
GAGGAAACTTTGAGGAAACTTTGTTCGACGCCGCCAAGACTGTAGCCGCC
AAAATACTGACGTTTTGACCAAGTTTTGTGCGCGGAAAGCAGTATCAAGG
TGACCCGTCATTTAAGGCGTCCCCGCGTGTATTTTCGTTCTTAGTTGAAG
GTGTCATCATCCCTCCTAAGCATTGTTTTGCATGCGACTTTCGTTTCGAA
CCTGGGATATGAAACCCCACGACGGAAGATTCGACGTCAGGAGAGACAGG
TGGCGCCTGCTCTCAGCGGAGGAGATTCATAAAAGCGCCATGCAGAGAGG
GTCCCTGGCGCGAACTGGTGAAGACCCGCCGACGAGTATTCAACTGGCTG
GCCCCGCCTCTGGAACAAAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6318:7597..9766- >mRNA_L-elsbetiae_contig6318.14961.1 ID=mRNA_L-elsbetiae_contig6318.14961.1|Name=mRNA_L-elsbetiae_contig6318.14961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig6318:7597..9766- (Laminarionema elsbetiae ELsaHSoW15)
GGCCCACCGCGCTTTCCGATTCGAAAAGGATGCACCCGTCCCGTTCAGCA
GGAAGTCCTCCAACGAGGGCCCACCGCGCTTTCCGATTCGAAAAGGATGC
ACCCGTCCCGTTCAGCAGGAAGTCCTCCAACGAGAATGGGACAAGCTCGG
TCCCGAAGAAAAGGCCATACGGCGGGCGCAGCGAGCGAGGAGCGGAGAGC
GCTGCACACAGTGCGGATGCGTCGGATACTTCCGTCGAAACTGCCCCATG
TGCCCCCCAGTTAGAATGGGACAAGCTCGGTCCCGAAGAAAAGGCCATAC
GGCGGGCGCAGCGAGCGAGGAGCGGAGAGCGCTGCACACAGTGCGGATGC
GTCGGATACTTCCGTCGAAACTGCCCCATGTGCCCCCCAGTTAGATTCGA
CGTCAGGAGAGACAGGTGGCGCCTGCTCTCAGCGGAGGAGATTCATAAAA
GCGCCATGCAGAGAGGGTCCCTGGCGCGAACTGGTGAAGACCCGCCGACG
AGTATTCAACTGGCTGGCCCCGCCTCTGGAACAAAGATTCGACGTCAGGA
GAGACAGGTGGCGCCTGCTCTCAGCGGAGGAGATTCATAAAAGCGCCATG
CAGAGAGGGTCCCTGGCGCGAACTGGTGAAGACCCGCCGACGAGTATTCA
ACTGGCTGGCCCCGCCTCTGGAACAAAG back to top
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