mRNA_L-elsbetiae_contig6317.14958.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6317.14958.1 vs. uniprot
Match: D7G6T9_ECTSI (Tankyrase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T9_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.370e-22 Identity = 56/81 (69.14%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 1 CSR-QLKEVKAMVEYGGMDLAEVDKSGKTLVHVAAGHRHCHEVLAYLLEKGASLDTGDNSGVTPLHSAASSRNIGGILLLL 240 C R QLKE+KAMVE G MDL VD GKT VHVAAGHRHCHEVL YLL KGAS + D+ G PLH AAS RNI GI LL Sbjct: 49 CRRGQLKEIKAMVESGEMDLTGVDGQGKTPVHVAAGHRHCHEVLVYLLGKGASFNRRDDLGAVPLHDAASHRNIVGIRQLL 129
BLAST of mRNA_L-elsbetiae_contig6317.14958.1 vs. uniprot
Match: A0A1W0A100_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A100_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 5.090e-7 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 10 QLKEVKAMVE-YGGMDLAEVDKSGKTLVHVAAGHRHCHEVLAYLLEKGASLDTGDNSGVTPLHSAASSRNIGGILL 234 QL+ +K +++ +DLA+ D+ G TL+H AAG E+L LL +GA +DT +N G TPLH+AA+ N G+ L Sbjct: 122 QLEIIKILLDRITEIDLAKTDEDGMTLLHAAAGEEEASEILEILLNRGAQVDTKNNDGKTPLHTAAACGNFLGVKL 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6317.14958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6317.14958.1 >prot_L-elsbetiae_contig6317.14958.1 ID=prot_L-elsbetiae_contig6317.14958.1|Name=mRNA_L-elsbetiae_contig6317.14958.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=613bp MVEYGGMDLAEVDKSGKTLVHVAAGHRHCHEVLAYLLEKGASLDTGDNSGback to top mRNA from alignment at L-elsbetiae_contig6317:5161..10331+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6317.14958.1 ID=mRNA_L-elsbetiae_contig6317.14958.1|Name=mRNA_L-elsbetiae_contig6317.14958.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5171bp|location=Sequence derived from alignment at L-elsbetiae_contig6317:5161..10331+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6317:5161..10331+ >mRNA_L-elsbetiae_contig6317.14958.1 ID=mRNA_L-elsbetiae_contig6317.14958.1|Name=mRNA_L-elsbetiae_contig6317.14958.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3678bp|location=Sequence derived from alignment at L-elsbetiae_contig6317:5161..10331+ (Laminarionema elsbetiae ELsaHSoW15)back to top |