prot_L-elsbetiae_contig101.148.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig101.148.1
Unique Nameprot_L-elsbetiae_contig101.148.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length304
Homology
BLAST of mRNA_L-elsbetiae_contig101.148.1 vs. uniprot
Match: Q8QNM8_ESV1K (EsV-1-36 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM8_ESV1K)

HSP 1 Score: 254 bits (649), Expect = 1.570e-80
Identity = 141/297 (47.47%), Postives = 191/297 (64.31%), Query Frame = 0
Query:    4 NGCFVNRSVKFKRQSKDGLVHAICGDVEIKQGDIVCYEIPAKSTGASLRLDILRYTMECVYEREETLFPCAFNQDAPSTDVKVFFDYVFSNAKYRREVSDRLALALYSQHRTQAEQHEQNNTVYIFKTLGIFDKCKYYNCDSVSYENGETFLVASKDIGIGDILTRTKSSVTIPSLEQERCQGKGLELFDLTLRLMSKFSVRDVHVFTKALSHRDNAELVRPAGSVFVIRSDLDPDLENRMAKYKMDREMGIATFHAGVERLSKKATDLSQKEKSIKKDEHLEELEEIYKRYNDAFE 300
            N CF++ +++FKR   +GL+H +C    IK G+ V YEIPAKST  S +LDI RYTM+CVY  E  LFPCAFNQ+APS D+KVFFDYVF    YRR +S+++ALALY+        H ++N  +++KT+G+F + +  NC  V YENGETFL A++D+ IG+ L     +VT+PS ++E         F  TLRLM+  ++ D  +F KAL++R+ A LVRP   V  + S  DP L+ R+AKY MDRE+GI  FH GV RL KK  +   KE        L +LEE+Y + ND FE
Sbjct:    6 NKCFLHPNLQFKRMD-NGLIHPVCQS-SIKAGETVAYEIPAKSTDQSFKLDIFRYTMQCVYSGE-CLFPCAFNQEAPSDDIKVFFDYVFRTT-YRRGLSEKVALALYA--------HNRSNAPFLYKTIGVFGQSEEANCLRVCYENGETFLAATRDVEIGETLMVAPGAVTVPSQKEEAD-------FSNTLRLMTNINLEDAPLFAKALAYREKAMLVRPDARVVHVNSKFDPGLDKRVAKYTMDRELGITDFHVGVGRLDKKYRENEAKE-------GLLDLEELYDKLNDEFE 276          
BLAST of mRNA_L-elsbetiae_contig101.148.1 vs. uniprot
Match: D8LP71_ECTSI (EsV-1-36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP71_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.410e-77
Identity = 146/303 (48.18%), Postives = 192/303 (63.37%), Query Frame = 0
Query:    1 MVG--NGCFVNRSVKFKRQSKDGLVHAICGDVEIKQGDIVCYEIPAKSTGASLRLDILRYTMECVYEREETLFPCAFNQDAPSTDVKVFFDYVFSNAKYRREVSDRLALALYSQHRTQAEQHEQNNTVYIFKTLGIFDKCKYY-NCDSVSYENGETFLVASKDIGIGDILTRTKSSVTIPSLEQERCQGKGLELFDLTLRLMSKFSVRDVHVFTKALSHRDNAELVRPAGSVFVIRSDLDPDLENRMAKYKMDREMGIATFHAGVERLSKKATDLSQKEKSIKKDEHLEELEEIYKRYNDAFE 300
            MVG  N CF++  ++FKR + D L+H +C    I+ G+ V YEIP KST  S +LDI RYTM+CVY  E  LFPCAFNQ+AP+ D+KVFFDYVF    YRR +S+++ALALY+        H ++N  +++KT+G+F + +   NC  V YENGETFL A +D+ IG+ L     +VT+P L++E         F  TLRLMS   V D  +F KALS R+ A LVRP   V  + S  DP L+NR+AKY MDRE+GI  FH GV RL KK  +   KE +    E L +LEE+Y + ND FE
Sbjct:    1 MVGTMNRCFLHPDLQFKRTTDD-LIHPVCQS-PIRAGETVAYEIPVKSTAQSFKLDIFRYTMQCVYSGE-CLFPCAFNQEAPADDIKVFFDYVFRTT-YRRGLSEKVALALYA--------HNRSNAPFLYKTIGVFGQSEVEANCLRVRYENGETFLAAVRDVDIGENLVMAPGAVTVP-LQKEEAD------FSNTLRLMSNIDVEDAPLFAKALSFREKALLVRPDARVVHVNSKFDPGLDNRVAKYTMDRELGITDFHVGVGRLDKKYRE---KEAT----EGLLDLEELYGKLNDEFE 277          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNM8_ESV1K1.570e-8047.47EsV-1-36 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP71_ECTSI2.410e-7748.18EsV-1-36 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 262..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig101contigL-elsbetiae_contig101:37404..38315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig101.148.1mRNA_L-elsbetiae_contig101.148.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig101 37404..38315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig101.148.1 ID=prot_L-elsbetiae_contig101.148.1|Name=mRNA_L-elsbetiae_contig101.148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=304bp
MVGNGCFVNRSVKFKRQSKDGLVHAICGDVEIKQGDIVCYEIPAKSTGAS
LRLDILRYTMECVYEREETLFPCAFNQDAPSTDVKVFFDYVFSNAKYRRE
VSDRLALALYSQHRTQAEQHEQNNTVYIFKTLGIFDKCKYYNCDSVSYEN
GETFLVASKDIGIGDILTRTKSSVTIPSLEQERCQGKGLELFDLTLRLMS
KFSVRDVHVFTKALSHRDNAELVRPAGSVFVIRSDLDPDLENRMAKYKMD
REMGIATFHAGVERLSKKATDLSQKEKSIKKDEHLEELEEIYKRYNDAFE
RGL*
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