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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-12_002610.1 |
| Exons | 6 |
| Model size | 2286 |
| Cds size | 609 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816695.5425484-UTR-L-elsbetiae_contig6307:757..789 | 1622816695.5425484-UTR-L-elsbetiae_contig6307:757..789 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 758..789 + |
| 1691683746.4818645-UTR-L-elsbetiae_contig6307:757..789 | 1691683746.4818645-UTR-L-elsbetiae_contig6307:757..789 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 758..789 + |
| 1622816695.5561075-UTR-L-elsbetiae_contig6307:2135..2179 | 1622816695.5561075-UTR-L-elsbetiae_contig6307:2135..2179 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 2136..2179 + |
| 1691683746.494227-UTR-L-elsbetiae_contig6307:2135..2179 | 1691683746.494227-UTR-L-elsbetiae_contig6307:2135..2179 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 2136..2179 + |
| 1622816695.6212056-UTR-L-elsbetiae_contig6307:5392..6780 | 1622816695.6212056-UTR-L-elsbetiae_contig6307:5392..6780 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 5393..6780 + |
| 1691683746.5523713-UTR-L-elsbetiae_contig6307:5392..6780 | 1691683746.5523713-UTR-L-elsbetiae_contig6307:5392..6780 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 5393..6780 + |
| 1622816695.6345046-UTR-L-elsbetiae_contig6307:6822..7035 | 1622816695.6345046-UTR-L-elsbetiae_contig6307:6822..7035 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 6823..7035 + |
| 1691683746.5617652-UTR-L-elsbetiae_contig6307:6822..7035 | 1691683746.5617652-UTR-L-elsbetiae_contig6307:6822..7035 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6307 6823..7035 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816695.5698752-CDS-L-elsbetiae_contig6307:2179..2224 | 1622816695.5698752-CDS-L-elsbetiae_contig6307:2179..2224 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 2180..2224 + |
| 1691683746.5064478-CDS-L-elsbetiae_contig6307:2179..2224 | 1691683746.5064478-CDS-L-elsbetiae_contig6307:2179..2224 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 2180..2224 + |
| 1622816695.5811539-CDS-L-elsbetiae_contig6307:2616..2730 | 1622816695.5811539-CDS-L-elsbetiae_contig6307:2616..2730 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 2617..2730 + |
| 1691683746.5168786-CDS-L-elsbetiae_contig6307:2616..2730 | 1691683746.5168786-CDS-L-elsbetiae_contig6307:2616..2730 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 2617..2730 + |
| 1622816695.5947726-CDS-L-elsbetiae_contig6307:4189..4342 | 1622816695.5947726-CDS-L-elsbetiae_contig6307:4189..4342 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 4190..4342 + |
| 1691683746.5279684-CDS-L-elsbetiae_contig6307:4189..4342 | 1691683746.5279684-CDS-L-elsbetiae_contig6307:4189..4342 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 4190..4342 + |
| 1622816695.6063483-CDS-L-elsbetiae_contig6307:5095..5392 | 1622816695.6063483-CDS-L-elsbetiae_contig6307:5095..5392 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 5096..5392 + |
| 1691683746.5406415-CDS-L-elsbetiae_contig6307:5095..5392 | 1691683746.5406415-CDS-L-elsbetiae_contig6307:5095..5392 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6307 5096..5392 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6307.14945.1 >prot_L-elsbetiae_contig6307.14945.1 ID=prot_L-elsbetiae_contig6307.14945.1|Name=mRNA_L-elsbetiae_contig6307.14945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp
MSSEFQDSYSNDYGNHQDHSAINAQTCRDRIKVGTERYALLKEIRLDAKV
RLAAQAIDDAKRDREIEEMKERFVKELLAAENAIGDAVLSVRTRDRQIIN
VNDQLCKSFMSIQRLHKSKHQVEADARREVRQEMRAEQEQMQATLDIQNK
AAGRRYNNRSVATSKDMGRRTPSSGSFFSRASTGGGSGAGAANGENAGKA
GK* back to topmRNA from alignment at L-elsbetiae_contig6307:758..7035+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6307.14945.1 ID=mRNA_L-elsbetiae_contig6307.14945.1|Name=mRNA_L-elsbetiae_contig6307.14945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6278bp|location=Sequence derived from alignment at L-elsbetiae_contig6307:758..7035+ (Laminarionema elsbetiae ELsaHSoW15)
TAGTCATTGGACGCAGTCGTCAGCCAGGGCAGGTGAGGGAACGCGCCCCG
AAGGAGAGAGAAAGAGAGCTTTGATTTCTCAATATGGAGCTGTCTTGACT
TATAAAACCTGCAGCTGCTGTGCTTCTTTGCGTGAGGGTCTTCTCTCCGT
TTGCCAGTGCGGTCCGGCGACGACACTATATACAGATCTAAAGCGCTGCG
GCCGTAGAGTTCTGCCTTTCCTGTCTAATGACACCTGATTTGTCAAGTTC
CTCGCCCTATTGCCCTCAAACCCGACGAAACAAACTTTCGCAGTTGTGCC
GCAGTAGCTGGCAGAGAAAGTGCGGCGCAACCCCCCGCCGGATGCCGGAT
GGCGCTAGTGTATTTCCCCCGAGCCCGAGAACGCGCCGCCGACAGCACAG
ATCCGCTTGATAACTATGCACATGAACTATATACACTTGTTATGAGTTCG
CACCCAAGGTGGTGCGTCGAAATACACACAGCAGTAGACGAGAGGGGCGT
ATTTCTCATAAAAGTCGCGTTTGCGCGACGGCGTGAGCTTAGCTTCCCCC
TCTACGGTTTAGGAACGGTGCACTGGTATGTCAAAGAGGGTATTGTGAGG
GTTTCTCAGCAGTTCGAATTTTTCTGCAACACGCAGTATAGGCCGAGAAC
TCGCAATCGGCGCGAAGCAAGTTTTGAATTTGCGCGGACATCGTATGTAG
ACTACTCTTCGTTCGATACGAAAAAAAATCCGGCGGAAAATGCTGTGAAG
TCAAATATTGCTTCGCGCCGATTACGAGTTCTCGGCCTATACTGCGTGTT
GCAGCAAATTTCCAAGTGCTGAACGACCCTCATAACACCTGCTTTGATGT
ACCAGTGCACCCTTCCTAAACCGTTGAGGGGGAAGCTAAGCCTAAGCCGC
CGCGCGAAGGCAACTTTTATGAGAAAATCGTCCCTCCTGACTGCCGCTGC
GTGTATTTCGACGCGCCACTTTCGGTGCTAGGTCTTCATAATACATGTAG
TTTACGTGCCAAATTTCGTAGCCATTGGTTCTGTCTGCGACGCGTTCTCG
TCATCGTTGAAAATCACGCGGAGGCATAGAGGTTGCCCCGCACAAAAGTT
TGCCAGCTAGGTATATATATATTTTTTTTCTACACCGAGCAGCACTGTTG
CCAGCCTGGCTCTTCTGCTTCTTGTGCGTGGCTTGGGCGTTGCTGGTGGC
ACAGCGGTTGGTTTTGTATCGATCAGTGAGAGGAGGAGAACGTATGTGAT
GTCTATACATATATACTTACTTTGCACGCGTCGTGTTTCCTTAACCCCTG
TGAAAACACACAGAGAGAGAGAGAGAGAGAGAGAGAGCTGTGAGGAGCTA
ACCAATTTTTCGCTCCCCCATGCAGCAGGATCACCGTGCGGTCGGCTGCT
TCGGTGTGCCGAGAGAGGAAACATGTCAAGCGAATTTCAAGATTCTTACT
CGAACGACTATGGCAATGTGAGTTCTCATGGTTTGAACAGCAGTATTTTG
CCTGTTTTTTTAACGGACTAATAATAGCAACGTGGTGGCGGTGGGTGATG
ACGTGATGACGTCGATTTCTCTTAGTGTGGAGAGTCACAGAACCTTGATG
TCGGTCTTATCTATACCGCAGGTACTGGCCAAACAGCCGTCGGCATGTGC
AATCCAGTGCACCCCCCCGAATCCCCTGCGCCCGGATTTTGAAGCATACA
ACGACGCCCGTGTAGCTGGTGAGCCTCTGCACTCATTTTCCACAAAGGCT
GCTTGCGGCTGCTGTCGTGAAAATTCCAGATTCTGAATTTGTCCACATGT
TCAACTTGGAATGCGTGCTCCTCGCTGCGCGTCTGCTCCTTTGGTTACTC
TTGCTCCAGCACCAGGACCATAGCGCCATCAACGCTCAGACCTGTAGGGA
CCGCATCAAGGTCGGTACGGAGAGGTATGCTCTCCTGAAGGAGATCCGTT
TGGACGCCAAAGTCAGACTCGCGGTGAGTGTGTCACAACAGCGCGGCCCG
AGCGCCACGAGGAAAAAAAACATGCCGGTGTTTGTACACATTAGCACACC
CATGTGCTCCTTGCTTCAAGTGTACGTAGAGTTACGTTGCTTTGCATAGT
AAGGGCATGCTTCTGTCAGAGGCGAACTGAAGAAAGATTGACCCTAGACC
TTGATGTCATCGAGTTCGACGTGAAGCGTTGCCCGGAGCGGCTCAACCCT
CCCACTCAAAACTGTGTACCTGCTATGTATGTACAATACCGTAGGTGACA
CAAGATACCACACCCCCTGTAACTTTTAGAGCCCCATTACTCCGTAACGA
AGAGGGTGCCAGCACTAAACGACACATTTTCGGACAGCCCTCGACTGGAT
CTTTCCAACGCCACCCCGTTTCGGCACTGGCACTCTTCTTGCTGGGAAGG
AATCGAGCTTTGAAAATCTGTCCAGGGGGTGTGGTATCATGTGTCACCTA
CGGTATACATCAGCGGTATCTCGTGTCATAAGCACCTCAGTACATCTGTC
TGTAGAATGTAAAAGTAGCTGTACCCCGCCCAAAAAACGGTTTTCTTCTG
CAGCCCCACCGGTTGTTTTCATCGTCTTCTTCTTGCTGTCGGTTTTTAGT
ATTTTAGTACCTTCCGGCAGCATTAACACATCGGCGTTTTTGTTTCGTAT
GTATGGTTTCCCAGAAGCTCATCCCTGATTTCGTACTGGAGAACTTTTCG
TACAGGCAGGTTGTTGTACTACTTACCATGGATGCGTACTCCTTTAAGAT
GCACAATCAGTAGGCTTCATGTCCTGGTGCATTTCAACCATCGTGGTTGG
AGGGACAGGGTCGACGGACCGAGAGCCGTCGTCGTGATTGTTTACGCTTT
ACCATCTGAGACCCTTCTTGCAGTGCCAATGTGAATCGTCTGGATGCCGC
ATGTGTTTCGATTCATAAAAAAATCAGATCGGCGTGAACACGACCTACAC
AGCACCAGTCATATAGCGTGGTAGAGTCAAGAACCTTGGTAGAGAAGTGA
CAAAGTGAGGCTCGCTCCCATATTTAAACTCGAAGAGCTTATTGACACGC
CGTCGTCTGTGGTGCCCGATATTTAAAACGTATCGACCTTCCGCCGCAAC
TGAGGAAATGATCGACCTTGAAGAGTGGACACGCATATGCTCCTTTGTGC
TTTGCATGTGCTCGCAGCACACACACATGGTTGCCGTGGCAGGTTGTCGT
GTGCAGATTCTGCGGCAAGGAGCGAACGGAGGAACAGTAGCAATGGGTGT
GCTGTGTAGTGCACCACGAGATGGATGACCGACCCGACGAAGATGCCAAG
TCTCCAACCTTGGCGTATTTTTGTTTGTTGTTGTTGTTGTTGTTGTTGTC
GTCGCTCACGGCGGTGTTGGCCTGTTTTGGCACGCTCGCTGCCTGCTGCC
TGCCTCCTCTACCTCTGCATCTGGCGGCACAGGCCCAAGCGATCGACGAC
GCAAAGAGAGACCGCGAGATCGAGGAGATGAAGGAGAGATTCGTAAAGGA
GCTGCTGGCCGCAGAGAATGCCATAGGCGATGCCGTCCTGTCGGTGCGCA
CAAGGGATCGACAGATCATCAACGTCAACGACCAGGTACACACACCCAGG
CAACCTTCGCGCAGGTGTATACACAAGCAACAGCAGCAGCGCTGGAAACA
AACCCGATGCCTATCTATTTTACCGTGATCCGTGATCTCGGCAGGGTGGC
ACTTGCTGCACAGGGTTGATGATAGCCCACAACAAAAGCCGCATCTAAGC
GTAAAAAGTGTCCTTGTTGTAATAAGTGGCGAGAGCCGATTCGCCTTCAG
AGAGACTCTTCATGCATAGAGTCAGGCACCAACCACGCTTGAGCTGTACA
TGGTCGAGGCAGCCGAGGTCGCCCCGACCTGGCCAGCATAAAAACGTGAA
ATGATCAAGGGTTCACTTCGCATGAAATACACGCGCGTAGTAACTAAAGT
TTGACGTGCCACGGGAAAAGAGGTGCCACGCGCGGTAAATCCTGGGATGT
CCCGAGCGCGAACGAGTTGATTCTTGGACCACGATGACCCGTTTGCTGCG
TATGGAGTCCAGCTGCGGCAGAGGTTTGGTTTGGTGGTGGTGTGTGTGTG
TGTGGTTGCCGAGTCGCTTGCTGGTGGGTGGTTTCTCCGCTCTTACCCAG
CGGATAGATGCACCTCTACTTACGTGGGGAGCACAGCCAGTGTTTTGGAA
TTAGGCCGCCTCTTTTACCGTCCCCAGCGCGGCGCAAACCAACCGTCTGT
TGGCTTATTTTATCCCCCCCCCCCCCTCCGCCGCTCTTGCCCACGATCTC
CTCCTACCCACAAACATCGTCTGGACAACAAACAACAGCTTTGCAAATCG
TTTATGAGCATCCAGAGGCTCCACAAGAGCAAGCACCAGGTCGAGGCCGA
TGCGAGGAGGGAAGTGCGACAGGAGATGCGCGCGGAGCAGGAACAAATGC
AGGCGACCCTCGACATCCAAAACAAGGCCGCCGGCCGCAGGTACAACAAC
AGGAGCGTCGCCACGTCCAAGGACATGGGTCGACGCACGCCCTCGTCGGG
CTCCTTTTTCTCGAGAGCGTCTACGGGAGGCGGGTCGGGCGCCGGAGCAG
CGAACGGCGAGAACGCAGGCAAGGCAGGGAAGTGAAGAAGAGCTCTGCTG
GTTGCACCGCCGTGTCTTGCAAACACAGGAAGGCAGCGGCGCTGGCCACG
TGCACGGGAAAACCGGAAGAAGTGTATGTAAGACCGAAAGAGGGAGCCAA
AATAATTCGGAGCAGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGG
CTTGGCTTGGCTTGGCTTGGCTTGGCTTTTTCTTTTTCTTGTGACTTAAC
ATCAGCTTGGGTTCAAAGGGCAACTGTTGCCTCTCTGTGAGTGGAGGGGG
CAGAAGGGTTTGTGTCTGAATATATTCGCTGTATCGTGAACTACCGCGCG
CGGTGAGTAAGTTCCGCTTTCCTCAGGCCGGGTGAGAGACTTCACGGTGT
AGATTGTTCGCCAAAATGCCACGTGGCCAGGATGTACGTAGGAACGAGGA
AGAATGGTGATGTGTGTCTTCATGGCACGGGCTGTGGCCGCACATTGGGT
GTTTGCGCACGTTGGATGTTTGCCCGTGGCTCTCGCGATGTTCGGAAAGC
GTCCACGTTAGCAGTAAGTACCAGTAGCGTTTTTTTTTTTTTATGCTCAC
CGCTGTCCTGGGGTTTTCGGGTTTGGCTGCAAGCTGTGAACGCAGGGTTT
TTCACTGCTGTTGCACTCGCGGGCGAATACAGAACGTAAAATAAGCATTC
GTTTGGTGTCGATACTGCAGGTGGCGCATTTACAAGTGTTAATTGCACAT
GTCCAGTGCTTTTCTTTCGCCAGTTTCCGCGATTTATTCGTCAGAGAACC
ACTATATCTGCATCATAACTCCCCCAGCGTGGGCTTGTGTTGTGGTATTC
ACAGGTGCAGGATACATCCGTAGAGATAGGATCGAACTGTTTGGATATAG
ATTGTGTATACGTGCATGGTACGAGCAGGTCATACATCCGTTGGGATAGG
ATCCAACCGTATAGATATAGACATGCATGGAGGGCGACGTCAACATGAGC
GATGAAACTACCCGGCTCGTCGATCACGCGTGGCGCCACGCAGGCGATGT
TGACGTCGCCCTCCTCGTATCGGTTGCTGTCCGTGGCCGCTTGCACGTTG
GTGGCACCTGCGTCCGCGCGAGCAGAAATCCTTCTATTTTGTCCGTGCAG
TGTTGTGCGTGGTTCACGCAGTTGTGTCGAGCTTATAGGTATGTACTAAT
AACTTTGTCGAATGTTTGGTCCTGGCAGTGAGAAGCGCTACAAGATACAT
AGTGGTGGGTGTGGGGGGCCCCACGGGAGGGATCCTTGAGTGTGACCACG
AATCAAAGAGCGCTGTCGTTTTGCCTTTCGAACGTTGATTCAATAAATTA
TGTGATGGAAAATTAGGCAGTAGTCTATATCGGGAGGTATATAGCTTTTG
AAATCAATGTCGGGAGGTATATAGCTTTTGAAAACAAATCAGGAAATCGA
AGAAAGAACTAATAGTTCTTTCTTTGATTTCCTGATTCGATTTCAAAAGA
GGTTTTTGCCTGCATTTTGTTTGATGGTGGGCAGGGAAGAGTTTTCTCTC
TTTTCCGTTCCTGTCAGTGGGTAGCGCTTACCGTGTGTACACAAACTTCG
ACCTCACCGACGACGAAGGAAAGGGACGGCTGAACCCTGCTCGCGATAAA
AGTAGTAGACAAGCACTGCAGACGGGGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6307:758..7035+ >mRNA_L-elsbetiae_contig6307.14945.1 ID=mRNA_L-elsbetiae_contig6307.14945.1|Name=mRNA_L-elsbetiae_contig6307.14945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1218bp|location=Sequence derived from alignment at L-elsbetiae_contig6307:758..7035+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAAGCGAATTTCAAGATTCTTACTCGAACGACTATGGCAATATGTC
AAGCGAATTTCAAGATTCTTACTCGAACGACTATGGCAATCACCAGGACC
ATAGCGCCATCAACGCTCAGACCTGTAGGGACCGCATCAAGGTCGGTACG
GAGAGGTATGCTCTCCTGAAGGAGATCCGTTTGGACGCCAAAGTCAGACT
CGCGCACCAGGACCATAGCGCCATCAACGCTCAGACCTGTAGGGACCGCA
TCAAGGTCGGTACGGAGAGGTATGCTCTCCTGAAGGAGATCCGTTTGGAC
GCCAAAGTCAGACTCGCGGCCCAAGCGATCGACGACGCAAAGAGAGACCG
CGAGATCGAGGAGATGAAGGAGAGATTCGTAAAGGAGCTGCTGGCCGCAG
AGAATGCCATAGGCGATGCCGTCCTGTCGGTGCGCACAAGGGATCGACAG
ATCATCAACGTCAACGACCAGGCCCAAGCGATCGACGACGCAAAGAGAGA
CCGCGAGATCGAGGAGATGAAGGAGAGATTCGTAAAGGAGCTGCTGGCCG
CAGAGAATGCCATAGGCGATGCCGTCCTGTCGGTGCGCACAAGGGATCGA
CAGATCATCAACGTCAACGACCAGCTTTGCAAATCGTTTATGAGCATCCA
GAGGCTCCACAAGAGCAAGCACCAGGTCGAGGCCGATGCGAGGAGGGAAG
TGCGACAGGAGATGCGCGCGGAGCAGGAACAAATGCAGGCGACCCTCGAC
ATCCAAAACAAGGCCGCCGGCCGCAGGTACAACAACAGGAGCGTCGCCAC
GTCCAAGGACATGGGTCGACGCACGCCCTCGTCGGGCTCCTTTTTCTCGA
GAGCGTCTACGGGAGGCGGGTCGGGCGCCGGAGCAGCGAACGGCGAGAAC
GCAGGCAAGGCAGGGAAGTGACTTTGCAAATCGTTTATGAGCATCCAGAG
GCTCCACAAGAGCAAGCACCAGGTCGAGGCCGATGCGAGGAGGGAAGTGC
GACAGGAGATGCGCGCGGAGCAGGAACAAATGCAGGCGACCCTCGACATC
CAAAACAAGGCCGCCGGCCGCAGGTACAACAACAGGAGCGTCGCCACGTC
CAAGGACATGGGTCGACGCACGCCCTCGTCGGGCTCCTTTTTCTCGAGAG
CGTCTACGGGAGGCGGGTCGGGCGCCGGAGCAGCGAACGGCGAGAACGCA
GGCAAGGCAGGGAAGTGA back to top
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