mRNA_L-elsbetiae_contig6295.14922.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6295.14922.1
Unique NamemRNA_L-elsbetiae_contig6295.14922.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: D8LEY3_ECTSI (Serine/threonine-protein phosphatase 6 regulatory subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY3_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 9.480e-91
Identity = 155/189 (82.01%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:   67 SPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLPKYAALQGISTRYL 633
            SPINDILDK++F+LEEILAQDEVLQEVKSLNIKLV+FLSKESSVR+MM+YLADPPPEGAPDNRVFKFPYMSCEIICCEVPEIL A+A D  G     DDCPLRKLFS+L+ EGDID+HRAGYLEK    VLTVLLKHRCGATTAFVN  G++LFR+MVRHLGNFSVMQVAKLLLLPKYAALQ I    L
Sbjct:    7 SPINDILDKDSFSLEEILAQDEVLQEVKSLNIKLVDFLSKESSVRDMMSYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILKAIASDGAGGG---DDCPLRKLFSILDGEGDIDSHRAGYLEK----VLTVLLKHRCGATTAFVNERGLDLFRRMVRHLGNFSVMQVAKLLLLPKYAALQDIDATVL 188
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: A0A6H5LCR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCR6_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.380e-57
Identity = 109/148 (73.65%), Postives = 119/148 (80.41%), Query Frame = 1 
Query:  178 LSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKD-VGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLPKYAALQGI 618
            LSKESSVR+MM+YLADPPPEGAPDNRVFKFPYMSCEIICCEVPEIL A+A D VGG     DDCPLRKLFS+L+ EGDID+HRAG                 CGATTAFVN  G++LFR+MVRHLGN+SVMQVAKLLLLPKYAALQ I
Sbjct:   14 LSKESSVRDMMSYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILKAIAFDGVGGG----DDCPLRKLFSILDGEGDIDSHRAG-----------------CGATTAFVNERGLDLFRRMVRHLGNYSVMQVAKLLLLPKYAALQDI 140
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: W7TD98_9STRA (Sit4 phosphatase-associated family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD98_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.280e-50
Identity = 96/196 (48.98%), Postives = 133/196 (67.86%), Query Frame = 1 
Query:    4 MSLFNFGGGGDIWSSAGFAFVSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLL 591
            M+LF   G G+ WSS  +   SP+ND+LD+  FTL+E+  +D+VLQE+KS+N +L++FL++E+S+ EM+  L DPPP+GA D RV KFPYM+CE ICCE   +L+A+     G         LR++FSLL++EGD+D    GY EK    V+ VLL+ RC    AF+N  G+ LFRK VRHL N+S+MQV + L L
Sbjct:    1 MALFQSFGQGEFWSS-NYTINSPVNDLLDRGDFTLQEVFDEDDVLQEIKSMNTRLIDFLAQEASLEEMVELLVDPPPDGADDKRVHKFPYMACEAICCENDHVLDALVSTRDGEM-------LRRMFSLLDKEGDLDDRLTGYFEK----VVFVLLRLRCVQLMAFLNAGGLPLFRKFVRHLDNYSIMQVVEKLFL 184
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: A0A835YR29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR29_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.310e-40
Identity = 88/191 (46.07%), Postives = 123/191 (64.40%), Query Frame = 1 
Query:   28 GGDIWS-SAGFAFVSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLERE-GDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLP 594
            GGDIWS + GF F S ++DIL++E+FTL ++L +DEVLQEVK L+ KL++FL +  +V E+++YLADP P  A D R +K+PYM+CEI+CCEV  +L A+A+             L +L S+L++  G +D   AGYLE+A      VLLK         VN  G  LF + + H G+FSV+QV + LLLP
Sbjct:   13 GGDIWSGNFGFTFASSVHDILERESFTLGDLLEEDEVLQEVKGLDAKLIDFLCRPETVTELLSYLADPIPADASDARRYKYPYMACEIVCCEVDRVLAAIAEQPSH---------LAQLLSMLDQPPGGLDHRHAGYLEEA----FAVLLKRCRAQAVGAVNAGGAALFVRFLAHAGSFSVVQVLRRLLLP 190
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: A0A7S1BSS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSS7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.310e-40
Identity = 81/191 (42.41%), Postives = 123/191 (64.40%), Query Frame = 1 
Query:   28 GGDIWSSAGFAFVSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDN-RVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLE-REGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLP 594
            GGDIW+S  F++ SP+ D+LD+ +FTL EILA+DEVLQEVKS+N  L+ +L +  S+  +++YL++ PP    D  R+ ++P+M+CE+ICC V  I++ + +++ G         L KLF +LE  EG +D   AGY E    RV+  L + R  A T F+    + L R  +RH+GN+S++QV + LLLP
Sbjct:   99 GGDIWASDAFSYDSPLKDLLDRASFTLAEILAEDEVLQEVKSMNEALLNYLRQPDSLYGLVSYLSERPPSDCTDEQRIVRYPFMACEVICCNVDCIIDGLMEEMDGGV-------LAKLFEILEWEEGTMDVRLAGYFE----RVVLHLAQCRTLALTTFLRAGSLPLLRNFLRHIGNYSILQVLQRLLLP 278
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: A0A024G6J8_9STRA (Uncharacterized protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024G6J8_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.020e-33
Identity = 72/188 (38.30%), Postives = 113/188 (60.11%), Query Frame = 1 
Query:   37 IWSSAGFAF--VSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLP 594
            +WS+A   F   SP+N++L++E FTL+++L +D++LQEVK+ N  L++FLS+E SVREM+ Y++  P + +   R FK+PYMSCE+ICC+V  IL  +     G         +  LFS L+  G +D   AGY EK    V T+L+  +    T ++N    +L     +H+G FS+ ++ K +L P
Sbjct:   13 VWSNANSLFDVSSPLNELLEREEFTLQQVLQEDDLLQEVKARNQLLIDFLSREESVREMIKYISTSPSDSSDVLRTFKYPYMSCEVICCDVESILTTIVTTGDGQL-------IESLFSFLDPPGALDTRLAGYFEKVG--VTTILMARKSQEMTDYINNNADKLLHAFNQHVGCFSIAELFKRMLQP 191
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: K3WM88_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM88_GLOUD)

HSP 1 Score: 134 bits (338), Expect = 7.700e-33
Identity = 75/202 (37.13%), Postives = 119/202 (58.91%), Query Frame = 1 
Query:    4 MSLFNFGGGGDIWS--SAGFAFVSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLPKYA 603
            MSLF+      +W   S+ F   SP+ND+L+K+ FTLE++L +DE++QEVK+ N KL+EFLS+E SV +M+ Y+   P + + D R  K+PYMSCE+ICC++  I   +A    G         +  LF  L + G +D+  AGY EK    ++++L+  +    TA +N    +L +  V H  +FS+ ++ K LL P ++
Sbjct:    1 MSLFSMSDESSMWGKGSSLFNISSPLNDLLEKDDFTLEQVLEEDELIQEVKTRNTKLLEFLSQEQSVLKMIEYVVQTPEDPSDDMRTLKYPYMSCEVICCDIMSITETLAGASEGKI-------VETLFEFLYQSGPLDSRLAGYFEK----IMSMLMVRKPQEMTALMNKNSEKLLKGFVSHADSFSIAELLKRLLQPYHS 191
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: A0A421FIT3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FIT3_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.970e-32
Identity = 74/193 (38.34%), Postives = 114/193 (59.07%), Query Frame = 1 
Query:   31 GDIWS--SAGFAFVSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLPKYA 603
            G +W+  S+ F   SP+ND+L+KE FTLEE+L +DE++QEVK+ N KL++FLS+E+ +++++ Y+   P +   D R  K+PYMSCE+ICC++  I + + K   G         +  LF  L +  D+D   AGY EK    V+T+L+  +    TA +N    +L     RH  +FSV ++ K LL P  A
Sbjct:    5 GSVWAQGSSLFNISSPLNDLLEKEDFTLEEVLQEDELVQEVKTRNTKLLDFLSQETILQKLVEYIVRSPEDMTDDLRTLKYPYMSCEVICCDITSITDTLVKASEGKI-------IETLFEFLYQTQDLDPRLAGYFEK----VMTMLMVRKPQEMTALLNKNSEQLLSGFTRHAASFSVAELLKRLLQPYQA 186
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: F0WEH4_9STRA (Serine/threonineprotein phosphatase 6 regulatory subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEH4_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.090e-31
Identity = 71/188 (37.77%), Postives = 113/188 (60.11%), Query Frame = 1 
Query:   37 IWSSAG--FAFVSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLP 594
            +WS+    F   SP+N +L+K  FTL+++L +D+++QEVK+ N  L++FLS+E SV EM+ Y++  P +     R FK+PYMSCE+ICC+V  IL+A+ K   G         +  LFSLL+++  +D   AGY EK    V T+L+  +    T ++N    +L     +H+G FS+ ++ K +L P
Sbjct:   13 VWSNRNSLFDMSSPLNKLLEKGEFTLKQVLEEDDLMQEVKARNQTLIDFLSREESVCEMIEYISTNPDDTCDVIRTFKYPYMSCEVICCDVDSILSAIIKTGDGQL-------IETLFSLLDQQEALDTRLAGYFEK----VTTILMARKSQDMTIYINNNADKLLHAFNQHVGCFSIAELYKRMLQP 189
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BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Match: A0A067D126_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D126_SAPPC)

HSP 1 Score: 126 bits (316), Expect = 1.970e-30
Identity = 70/202 (34.65%), Postives = 116/202 (57.43%), Query Frame = 1 
Query:    4 MSLFNFGGGGDIWSSAG--FAFVSPINDILDKETFTLEEILAQDEVLQEVKSLNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEVPEILNAVAKDVGGXXXXXDDCPLRKLFSLLEREGDIDAHRAGYLEKARERVLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLPKYA 603
            MS F     G +WS A   F   SP+ D+LD++ FTLE++L +DE++QEVK+ N+KL++FLS E SVR+M+ Y+   P +G  D +  K+P+MSCE++CC++  I   ++    G         +  LF LL+    +D+  AGY EK    V+++L+  +    T  +N     L +  + H  +FS+ ++ K L+ P ++
Sbjct:    1 MSFFASDDSGSVWSKAATLFNISSPLADLLDRDDFTLEQVLEEDELIQEVKTRNVKLLQFLSTEESVRKMVYYITRTPEDGESDLKAIKYPFMSCEVLCCDIMCITETLSTAADGAI-------VEDLFKLLQHPSPLDSRLAGYFEK----VISLLMIRKPQEMTTLMNKNADWLLQGFMAHTLSFSIAEMFKRLMQPYHS 191
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6295.14922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEY3_ECTSI9.480e-9182.01Serine/threonine-protein phosphatase 6 regulatory ... [more]
A0A6H5LCR6_9PHAE2.380e-5773.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TD98_9STRA2.280e-5048.98Sit4 phosphatase-associated family protein n=3 Tax... [more]
A0A835YR29_9STRA1.310e-4046.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1BSS7_9STRA1.310e-4042.41Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A024G6J8_9STRA4.020e-3338.30Uncharacterized protein n=4 Tax=Albugo candida Tax... [more]
K3WM88_GLOUD7.700e-3337.13Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A421FIT3_9STRA4.970e-3238.34Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
F0WEH4_9STRA3.090e-3137.77Serine/threonineprotein phosphatase 6 regulatory s... [more]
A0A067D126_SAPPC1.970e-3034.65Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6295contigL-elsbetiae_contig6295:1188..5755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.0
Seed ortholog evalue2.2e-79
Seed eggNOG ortholog2880.D8LEY3
KEGG koko:K15501
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000235,GO:0000278,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005818,GO:0005819,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005938,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007275,GO:0008150,GO:0009790,GO:0009987,GO:0015630,GO:0016043,GO:0019899,GO:0019902,GO:0019903,GO:0022402,GO:0030029,GO:0030036,GO:0030588,GO:0030590,GO:0030865,GO:0030866,GO:0032501,GO:0032502,GO:0040001,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051293,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0071840,GO:0071944,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:1902850,GO:1903047
EggNOG free text desc.protein phosphatase binding
EggNOG OGsKOG2073@1,KOG2073@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko03400
Exons5
Model size633
Cds size630
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6295.14922.1prot_L-elsbetiae_contig6295.14922.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6295 1188..5752 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816693.1891031-CDS-L-elsbetiae_contig6295:1187..13671622816693.1891031-CDS-L-elsbetiae_contig6295:1187..1367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 1188..1367 -
1691683744.926737-CDS-L-elsbetiae_contig6295:1187..13671691683744.926737-CDS-L-elsbetiae_contig6295:1187..1367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 1188..1367 -
1622816693.2009602-CDS-L-elsbetiae_contig6295:2314..25041622816693.2009602-CDS-L-elsbetiae_contig6295:2314..2504Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 2315..2504 -
1691683744.9381044-CDS-L-elsbetiae_contig6295:2314..25041691683744.9381044-CDS-L-elsbetiae_contig6295:2314..2504Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 2315..2504 -
1622816693.2139351-CDS-L-elsbetiae_contig6295:2907..29941622816693.2139351-CDS-L-elsbetiae_contig6295:2907..2994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 2908..2994 -
1691683744.9519153-CDS-L-elsbetiae_contig6295:2907..29941691683744.9519153-CDS-L-elsbetiae_contig6295:2907..2994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 2908..2994 -
1622816693.2239149-CDS-L-elsbetiae_contig6295:3691..37991622816693.2239149-CDS-L-elsbetiae_contig6295:3691..3799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 3692..3799 -
1691683744.9618473-CDS-L-elsbetiae_contig6295:3691..37991691683744.9618473-CDS-L-elsbetiae_contig6295:3691..3799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 3692..3799 -
1622816693.2359495-CDS-L-elsbetiae_contig6295:5687..57521622816693.2359495-CDS-L-elsbetiae_contig6295:5687..5752Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 5688..5752 -
1691683744.9722462-CDS-L-elsbetiae_contig6295:5687..57521691683744.9722462-CDS-L-elsbetiae_contig6295:5687..5752Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6295 5688..5752 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816693.2475078-UTR-L-elsbetiae_contig6295:5752..57551622816693.2475078-UTR-L-elsbetiae_contig6295:5752..5755Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6295 5753..5755 -
1691683744.9806967-UTR-L-elsbetiae_contig6295:5752..57551691683744.9806967-UTR-L-elsbetiae_contig6295:5752..5755Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6295 5753..5755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6295.14922.1

>prot_L-elsbetiae_contig6295.14922.1 ID=prot_L-elsbetiae_contig6295.14922.1|Name=mRNA_L-elsbetiae_contig6295.14922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=210bp
MSLFNFGGGGDIWSSAGFAFVSPINDILDKETFTLEEILAQDEVLQEVKS
LNIKLVEFLSKESSVREMMAYLADPPPEGAPDNRVFKFPYMSCEIICCEV
PEILNAVAKDVGGGGGGGDDCPLRKLFSLLEREGDIDAHRAGYLEKARER
VLTVLLKHRCGATTAFVNGAGVELFRKMVRHLGNFSVMQVAKLLLLPKYA
ALQGISTRYL
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mRNA from alignment at L-elsbetiae_contig6295:1188..5755-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6295.14922.1 ID=mRNA_L-elsbetiae_contig6295.14922.1|Name=mRNA_L-elsbetiae_contig6295.14922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4568bp|location=Sequence derived from alignment at L-elsbetiae_contig6295:1188..5755- (Laminarionema elsbetiae ELsaHSoW15)
ACCATGTCGCTGTTCAACTTTGGCGGAGGGGGAGACATATGGTCCAGTGC
TGGCTTTGCATTTGTGAGGTGAGAGAAGAAATGCTCGCAGAAAAATTATC
TTGAGCAATAATAAGCAGAAGAAGGAGTGCACATGGTACGACAGAGGGTG
AAGAGTTAAAGAGTTTTACCATATAACCGCGTCATGCCAACGAAGCAACA
CACGCCAGAGACGAGAGACAGCGCATTTCTCTATAATTTGGATGGTATTT
TGCATCTTGCTCTGCCATACATATGTGTGGTATTGGTTGGCACCCCCATT
TTGAGCGAAGGTCTGGCTCTTGCCAAGCACCCTTTTCTCCTGGGTTTGGT
TTCTATATCTCTCTCTTGCTGTTTCGTCTGCGAGCTTCTTGTCTTCTTGT
TGGCGTAGATATCTACGAAGTATTTTGTAGACAGAGGGTGGCGTGTTTGG
TTCTGTTTCTTCCCCCCTGGAAAGATGATGATGTGATGATGATGCAGTTG
CACCGCGAGGACAGAGCAGTCGTTCAGTAGCGTGCCCTGAAGGAGGTCGT
GTAGCCCCTCGGCGCCGAAAGTTCGATCCTCACTTTTTGCCTTAGATGGT
GTGGCTTTCCCGCAGGATGAGAATTATCTCTTTAGATGAAGATCGACTTA
CTCCAGCCTACTTGTATCAAGCCTGCGGTCTGTTCAGACCCGCCGTGGGG
CATGCATGCGCCCTCGACGTGGTTGGCTCAACGGGCACACCACACACCAC
CCTCTTTGTGTATTTAGTATTTCACGCTGCCTACCGGGAGACTGCATGAT
TATGCTTGCACCTACACTACATAGTCCACCTCGTTAGTGGCGAGGAGGTT
ACCCTCGCTCGTAGAGGGAAAAAAGTACTTCGCATTAAATTGCGAGGCTT
CATGCGTACACACGCGCAGGGCGGTTGCTTCATGTACATTTACGCATGTG
TGGTATCTAGCGTGTGTATGTACCAGCTGATGTCTACGCCGGGACCGCTG
TCACACGGAAAGCAGATTATTTCGTTCATGGTTGTTCTTGCGTGGACCGA
TGATCGCCTGCTCTGTGGGCTCCTGCACAGATTGCAGCTCTCAAGAGTAC
ACAGAAGCAATATTTACGAAGATATTTTGTTTACTCGCGAAACGCCCCTG
CGCAGCAATATGAGCTGCGTGTCGATTTGTTAATGATTGCAGTTAGTAGT
ACTACGGAGTTTGCGCGAGAGACCCGGCATGCGGTAAATCTCTCATTTCG
GTTTTTCAATCAGCAGCCCTCCTTTCGCCGGCGTCACGTCCGTGTGCCCC
CCCCACACACACACACACTCCCCACTCTCCACTCCCCACCCCCCGAAACA
ATGCGGGCCTTATGTAGTAAAAACTTGCGATCGACACTCTGCCCAACTTG
ACCCCCGACGCGTCCGTTAATGTACACCCTTTTTTTTTTTTTGATGCCAC
TGCAGTTGCGCCTGTGCCTGTGTTGCAAAAATAGTCGGCAATGTACCTAT
TAAATTATCGTCAAACGACAACAACAATCGTGATTGATTGGGGGGGGGGA
GGAAGCAGTCCAGAGCTTTGAAACCGATATTTATACTGACACGTCAGCGG
TCTTTTTGGTGCCCATCATGAATATAACCCCCAAATACAAGCGCTCTCCG
TGGTACACATGTACTACACAGCCAACAACCTGTCTTGTGTTCCGAACGGA
GCGAAGCGGCGGTCGGTAGGAGAGATGACGATCAAGAACTTCATACATGG
AAAAAAATAAGCTTCTAAATGTACAGCGATGTACCCACCCTCCCACCCAC
GCACCCCGTGTGCCCCAACTGTGCCTGCCTCGCGCTGCTCGTTCGTCCGT
CGGTCCCGACCCTTTTGCGTACTTCGAAACCTTGTCGAAAAAACAAACCA
CGGTGTCGATCAACACAAAATAAATATATGCGCACGAACACAAACCGGCA
AAAAAGTCCTATCAACGACATCCTCGACAAGGAGACTTTTACGCTGGAGG
AGATTCTGGCCCAGGACGAGGTGCTCCAGGAGGTCAAGAGCCTCAACATC
AAGCTCGTCGAATTGTGAGAAGAATGGAGACGTGTTGTTGTTGTTGTTGT
TGCTGTTTTTTTGCGTGCTGGAGAGCGATACTCACACATGTAGGTAGGTA
GGTGTGAAAACCACGGCGACAGAAAGGTGGCAGCAGTGGCTACTGCGATG
GGGGTCGGTACGGCCGACGTGTCATTGCGGGGTGGTGACTGGCTGGTGGT
GTGGTGGCGGTGTTTGCGGAAAGCAGGGAAAGTGTTGCTTCCAGCAGAGG
CAGCGCGAGCGAGCACATGGTGTGACCGGCAATACATATTTATTTATATT
TACCTCTGCAAAGCAGCAGCGCAGGTTCGGGAGTCCCGGTGTTGCGTACA
TGAAGCTGTTATACATGGCCGTGGTTTTTATCTCTTGTCCGATGGAAGCG
ATGGTGATGACCGCTGTGCGTGTGGTCACACGTTTTCCTCTCATGCGCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCTCCCCCTCGCCCCCCTCACGCNNNNNN
NNNNTTTTTGTTTTTTCCTGTGGGAGGGATGGGGGGTGCCCGCCGGGGTG
TGTGTCCCCCCTTTTCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCC
CTCTCCCCTCCTCTCCTCTCCTCTCGTCCCCTCCCCTCCCCGCCTGCATG
CATGCATGCAGTCTCAGCAAGGAGTCAAGCGTACGCGAAATGATGGCGTA
CCTCGCCGACCCACCTCCAGAGGGGGCGCCGGACAACCGCGTGTTCAAGT
GAGTCGGTAGGCGAGGGGGGGTGGGGGTTCCGTGACTCACGAGTTGGGTC
TCTCGTTGCACACATTGTGGTGCGCATACACACCCGTGAACGAGAGGCCT
GCCGCCGAAAAGTGCGCAGGTTCAGCGTGTGCTCCCACTCTCACCCTCCC
GACGCGCGCGCGCGCTGCTGACGAAGGCAGCCTCCAGAATGGATGTTCTT
CGGTTAAGCGGGGGCGCGTGGCAAGTTTTTAAGAGAGGTTAAATGACCAG
CCTTTTTCGTCGGGTTCTGAGTGCATGACGCCAGAGCAGCCTCTGGGTTG
TAATCTCGCCGTGCCTCACTGCGTACCTCCTTACCCCACGCACGCGCTTA
AAACACCGCTTACGCACACGCACGCGCACGCGCCCGCGACACACCTGGCA
GATTCCCCTACATGTCGTGCGAGATAATCTGCTGCGAGGTGCCGGAGATT
CTCAACGCCGTGGCCAAGGACGTGGGCGGCGGCGGCGGGGGGGGTGACGA
CTGCCCTCTCCGAAAGCTCTTCTCTCTGCTGGAACGAGAGGGGGACATCG
ACGCCCACCGCGCGGGGTACCTGGAGAAGGCGAGGGAGAGAGTGATGGAT
TGTGTTGGCGAAGTATTGTACATGCATGCATACCTAGATATTTAGATCTA
TTTCCCGACGTATTTACATGAGTGTGTGCACGGCAGTCACGAGGCCCCCG
CTGTCCACCGCATGCATGTGTTCCGTTCTGTAAGTTGTCATGTGTCAACC
CACAACTTACTTACCCGATGATTTCGGGTGTTCTGTGTTTCCGATCTGGA
GGAGCTTGGGGCGGTTGCACAGCAGCTCCAGGCTCCTATAAGCCGCCACC
GACTTCTGACGGCCGGCCTGCAGCCGCAACCGCCACCGCTCTGCACATCC
ATGCATATGTACAGCCCCCCCGGCCATATTCGGCCGGGGTAATTAGTATA
CGACGCGTGTTTTTATCTCTCTCTGTCTCTCTCTCTCTCTCTCCTGGGAG
GAAGGCGTCCGTCCAGCAGAAGATTTTTACCGCCCTCTCGGGGAACAGCT
CTCCGTTTGCTGCCCCAACTTCGTTAGCTCTGCGTTAGCTGGGTGTGTAG
GGGAATCGTTTGTTGGCTCTCTATTTGCCCGTCCTTTGCTCTCCGCCCCC
TCCCCCCCCCCTTCATACGTGTAAAATGTCGTGCAGGCAGCAGCAGCCCT
CTCCGTGAACGCTTTCCCCCTCCCGTTTATTTTCATTATTTATTTATTTT
TCGGGGGGGGAGCCGGAAGCCGGAAGCCGCGATCGATGCCCCTCACCATG
CAAGACTCATGCACATAACTATGTGCATGTTGCGGGCGTGCTTTTGGCTG
CTTTGCAAGAGAAACAGACAGTAAAACAAAAATAGAACCGCCTAACCCAC
TTTATTGAGATGGGACTCCGCGCGAGATTCAATCGGTATTCCATCTAGAT
AGTGACTCTTTTTTTTTTCTTTTTTTTTCCTTTTTTTTCGGCGGTTTTGG
GCATATAATCGGGGCGGACGGACGGGGCGGGCGGGCAGGTGCTGACGGTG
CTGCTGAAGCACAGGTGCGGGGCGACGACGGCGTTCGTGAACGGGGCCGG
GGTGGAGCTGTTCCGGAAGATGGTGCGCCACCTGGGCAACTTCTCGGTCA
TGCAGGTGGCCAAGCTGCTGCTGCTGCCCAAGTACGCTGCGCTGCAAGGT
ATATCTACTAGATACTTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6295:1188..5755-

>mRNA_L-elsbetiae_contig6295.14922.1 ID=mRNA_L-elsbetiae_contig6295.14922.1|Name=mRNA_L-elsbetiae_contig6295.14922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1260bp|location=Sequence derived from alignment at L-elsbetiae_contig6295:1188..5755- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGCTGTTCAACTTTGGCGGAGGGGGAGACATATGGTCCAGTGCTGG
CTTTGCATTTGTGAGATGTCGCTGTTCAACTTTGGCGGAGGGGGAGACAT
ATGGTCCAGTGCTGGCTTTGCATTTGTGAGTCCTATCAACGACATCCTCG
ACAAGGAGACTTTTACGCTGGAGGAGATTCTGGCCCAGGACGAGGTGCTC
CAGGAGGTCAAGAGCCTCAACATCAAGCTCGTCGAATTTCCTATCAACGA
CATCCTCGACAAGGAGACTTTTACGCTGGAGGAGATTCTGGCCCAGGACG
AGGTGCTCCAGGAGGTCAAGAGCCTCAACATCAAGCTCGTCGAATTTCTC
AGCAAGGAGTCAAGCGTACGCGAAATGATGGCGTACCTCGCCGACCCACC
TCCAGAGGGGGCGCCGGACAACCGCGTGTTCAATCTCAGCAAGGAGTCAA
GCGTACGCGAAATGATGGCGTACCTCGCCGACCCACCTCCAGAGGGGGCG
CCGGACAACCGCGTGTTCAAATTCCCCTACATGTCGTGCGAGATAATCTG
CTGCGAGGTGCCGGAGATTCTCAACGCCGTGGCCAAGGACGTGGGCGGCG
GCGGCGGGGGGGGTGACGACTGCCCTCTCCGAAAGCTCTTCTCTCTGCTG
GAACGAGAGGGGGACATCGACGCCCACCGCGCGGGGTACCTGGAGAAGGC
GAGGGAGAGAATTCCCCTACATGTCGTGCGAGATAATCTGCTGCGAGGTG
CCGGAGATTCTCAACGCCGTGGCCAAGGACGTGGGCGGCGGCGGCGGGGG
GGGTGACGACTGCCCTCTCCGAAAGCTCTTCTCTCTGCTGGAACGAGAGG
GGGACATCGACGCCCACCGCGCGGGGTACCTGGAGAAGGCGAGGGAGAGA
GTGCTGACGGTGCTGCTGAAGCACAGGTGCGGGGCGACGACGGCGTTCGT
GAACGGGGCCGGGGTGGAGCTGTTCCGGAAGATGGTGCGCCACCTGGGCA
ACTTCTCGGTCATGCAGGTGGCCAAGCTGCTGCTGCTGCCCAAGTACGCT
GCGCTGCAAGGTATATCTACTAGATACTTAGTGCTGACGGTGCTGCTGAA
GCACAGGTGCGGGGCGACGACGGCGTTCGTGAACGGGGCCGGGGTGGAGC
TGTTCCGGAAGATGGTGCGCCACCTGGGCAACTTCTCGGTCATGCAGGTG
GCCAAGCTGCTGCTGCTGCCCAAGTACGCTGCGCTGCAAGGTATATCTAC
TAGATACTTA
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