prot_L-elsbetiae_contig6266.14879.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6266.14879.1
Unique Nameprot_L-elsbetiae_contig6266.14879.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length400
Homology
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BLAST of mRNA_L-elsbetiae_contig6266.14879.1 vs. uniprot
Match: Q8QNA0_ESV1K (EsV-1-188 n=2 Tax=root TaxID=1 RepID=Q8QNA0_ESV1K)

HSP 1 Score: 563 bits (1450), Expect = 3.340e-198
Identity = 284/398 (71.36%), Postives = 336/398 (84.42%), Query Frame = 0 
Query:    2 TIIGYGLSTKKNWALSGLMSANTQMSIMMLLMVADHGSSYWDHSRVSDAEYCLTSMLTSKKLDGTTGRVVFGGLGALLAAASAYGMHSGSITLAATSVPFATIMFYLCWSPQTFQSCKANGLVTGALAFGLDAMTFVGIMEALMAASGNGDTSWHRPTLMYTIVISLSFFVLFGWQSEYGKRIKDGGTCAIDDEADAAAEKGKDRRPELYTGILMSVVSIVYFLYLKASFSEISCCSVYPALVFLGFDVLTKLQVWKRGEPLVGDALHRSFIYVTVQVLDVLLSSGSLIAAMSERGLVPRASASASASRGLLGTAAHMAGGSLTYVWSIARLVGAIVSGRGATGTAAAGSLNRLAEIVKLVTLNVAANAVPLYIDQKNAAYMLSFSPQNDLNVPCHVD 399
            +++GYGLST++ WA+SGL+S +TQMSIM+LLMVADHGSS+WDHSRVS  EYCLTSM+TSK LD T GR+VFGGLG LL AA+A+GM SGSITLAATSVPFA I +YLCWSPQ FQSC+ NGL TG LAFGLD MTFVGIME L+ +SGN DTSWH PT+MY +VIS  F  LFGW SEYGKR+K  G+C I+DEAD AA+K +D+RPELYTG+LMSV S+++++YLK SFSEISCC+ YPAL+FLGFDVL KLQVWKRGE LVGDALHRSFIY+TVQ LDV LSS SL++ MS++GL+    A    SRGLL  AAH+AGGS+TYVW++ RLV A++SG G     A GS+NRLAEIVKLV+LNVAAN VPL+IDQKN++Y+LS SPQNDLNVPCHVD
Sbjct:   46 SVVGYGLSTRRKWAVSGLVSPSTQMSIMLLLMVADHGSSFWDHSRVSSEEYCLTSMITSKTLDDTIGRLVFGGLGTLLTAAAAHGMRSGSITLAATSVPFAMISYYLCWSPQKFQSCRNNGLFTGGLAFGLDIMTFVGIMEVLLQSSGNKDTSWHVPTVMYCVVISALFVALFGWNSEYGKRVKP-GSCEINDEADEAADKQRDKRPELYTGVLMSVTSVMFYVYLKMSFSEISCCATYPALLFLGFDVLIKLQVWKRGEALVGDALHRSFIYLTVQALDVALSSSSLVSLMSDKGLLVGGVAK---SRGLLTHAAHLAGGSMTYVWNVLRLVVALISGGG--NGMAKGSINRLAEIVKLVSLNVAANLVPLFIDQKNSSYVLSASPQNDLNVPCHVD 437
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6266.14879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNA0_ESV1K3.340e-19871.36EsV-1-188 n=2 Tax=root TaxID=1 RepID=Q8QNA0_ESV1K[more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 252..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 293..311
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 148..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 312..331
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..399
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..110
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 210..227
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 159..176
NoneNo IPR availableTMHMMTMhelixcoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6266contigL-elsbetiae_contig6266:10136..11335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6266.14879.1mRNA_L-elsbetiae_contig6266.14879.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6266 10136..11350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6266.14879.1 ID=prot_L-elsbetiae_contig6266.14879.1|Name=mRNA_L-elsbetiae_contig6266.14879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=400bp
MTIIGYGLSTKKNWALSGLMSANTQMSIMMLLMVADHGSSYWDHSRVSDA
EYCLTSMLTSKKLDGTTGRVVFGGLGALLAAASAYGMHSGSITLAATSVP
FATIMFYLCWSPQTFQSCKANGLVTGALAFGLDAMTFVGIMEALMAASGN
GDTSWHRPTLMYTIVISLSFFVLFGWQSEYGKRIKDGGTCAIDDEADAAA
EKGKDRRPELYTGILMSVVSIVYFLYLKASFSEISCCSVYPALVFLGFDV
LTKLQVWKRGEPLVGDALHRSFIYVTVQVLDVLLSSGSLIAAMSERGLVP
RASASASASRGLLGTAAHMAGGSLTYVWSIARLVGAIVSGRGATGTAAAG
SLNRLAEIVKLVTLNVAANAVPLYIDQKNAAYMLSFSPQNDLNVPCHVD*
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