prot_L-elsbetiae_contig6266.14878.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6266.14878.1
Unique Name	prot_L-elsbetiae_contig6266.14878.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	183

Homology

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BLAST of mRNA_L-elsbetiae_contig6266.14878.1 vs. uniprot
Match: Q8QKU7_ESV1K (EsV-1-190 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKU7_ESV1K)

HSP 1 Score: 172 bits (436), Expect = 1.050e-51
Identity = 96/180 (53.33%), Postives = 123/180 (68.33%), Query Frame = 0

Query:    1 MKLSIFVLCTSFFSSALSFLPALFSIENFIKSPSCLPTHRLHRVCESLSDFARAVDHRHKIGDLHGSWRQLRPKDNGFTSYQTIDYAKQFALETTLFSNGTRVEGVMPFTTCGSDETAYFTHSKEFTTFSDNSRFARNITCSAKSFELVYASASLRVDRMISAGSDSDFRVFVPCNDVFL 180
            MKLSI +L T+  SSALSFLP LFSIENFIKSP C     L RVC+ L          + +  LHGSWR ++P D   T YQTID   ++AL + LFSNGTR+   MPF TC  +ET YF H+K FT F+D+S +  N TCS++SF+LVYAS S+RVD+M++ G+   FRV+VPC++V L
Sbjct:    3 MKLSI-ILATTLVSSALSFLPKLFSIENFIKSPGC----NLDRVCQKLPAT------NNDVAALHGSWRLVKPADPETTIYQTIDREHEYALTSKLFSNGTRIHEAMPFVTCRRNETIYFNHAKIFTIFADDSGYTSNATCSSQSFQLVYASTSIRVDKMVATGA---FRVYVPCDEVML 168

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6266.14878.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6266.14878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
Q8QKU7_ESV1K	1.050e-51	53.33	EsV-1-190 n=1 Tax=Ectocarpus siliculosus virus 1 (...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..182
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.74

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6266	contig	L-elsbetiae_contig6266:9512..10060 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6266.14878.1	mRNA_L-elsbetiae_contig6266.14878.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6266 9512..10063 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6266.14878.1 ID=prot_L-elsbetiae_contig6266.14878.1|Name=mRNA_L-elsbetiae_contig6266.14878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
MKLSIFVLCTSFFSSALSFLPALFSIENFIKSPSCLPTHRLHRVCESLSD
FARAVDHRHKIGDLHGSWRQLRPKDNGFTSYQTIDYAKQFALETTLFSNG
TRVEGVMPFTTCGSDETAYFTHSKEFTTFSDNSRFARNITCSAKSFELVY
ASASLRVDRMISAGSDSDFRVFVPCNDVFLMM*