prot_L-elsbetiae_contig6260.14865.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6260.14865.1
Unique Nameprot_L-elsbetiae_contig6260.14865.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length250
Homology
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BLAST of mRNA_L-elsbetiae_contig6260.14865.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 9.340e-17
Identity = 53/68 (77.94%), Postives = 54/68 (79.41%), Query Frame = 0 
Query:   22 LPGVKGLVSPFPATAAAG------EKPRPKENEDAKQLAVETLLGLKNSQGSKGGAPMDEASAQAMVA 83
            LPGVKGL  P PA AA        EKPR KENEDAKQLAVETLLGLKNSQGSKGG PMDEASAQA+VA
Sbjct:  716 LPGVKGLALP-PAVAAXXXXXXXXEKPRRKENEDAKQLAVETLLGLKNSQGSKGGGPMDEASAQAVVA 782
[Close]
BLAST of mRNA_L-elsbetiae_contig6260.14865.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.930e-13
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0 
Query:   40 EKPRPKENEDAKQLAVETLLGLKNSQGSKGGAPMDEASAQAMVA 83
            EKPR KENEDAKQLAVETLLGLKNSQGSKGG PMDEASAQA+VA
Sbjct:  753 EKPRRKENEDAKQLAVETLLGLKNSQGSKGGGPMDEASAQAVVA 796
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6260.14865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM00_ECTSI9.340e-1777.94Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE1.930e-1393.18Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6260contigL-elsbetiae_contig6260:487..1467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6260.14865.1mRNA_L-elsbetiae_contig6260.14865.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6260 485..1467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6260.14865.1 ID=prot_L-elsbetiae_contig6260.14865.1|Name=mRNA_L-elsbetiae_contig6260.14865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
AAAAAAAAAAVAGKPAQGPPSLPGVKGLVSPFPATAAAGEKPRPKENEDA
KQLAVETLLGLKNSQGSKGGAPMDEASAQAMVAAATAAAAAAAAAARDSN
EGSAASAAAVAAALTAKAVAQAVAQAGAGAGSPSLSSSSTDSETPMGFAV
PAVGEEKGPSEPTPGAAAAVPEAAAAAAAAAVSGAEEKPVDVPSAGGAAV
TTQQAAAPDKEAPQAAAQPPAAPVAVAAAPVAAAPVAAPAAPVAATAGPA
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