prot_L-elsbetiae_contig6246.14847.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6246.14847.1
Unique Nameprot_L-elsbetiae_contig6246.14847.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length195
Homology
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 2.360e-104
Identity = 165/194 (85.05%), Postives = 179/194 (92.27%), Query Frame = 0
Query:    1 MIGTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYSRMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPLRIKDKSS 194
            MIGTAASNLM+AVLFIFVSRLYDVGDRVHIY+G S T+GEEPT+VTVVKVDLMTTVFKRWDEQVFYMPNHLLA KTIVNIQR AHQWHEFMIQVAA+T  +KL AL TSLQ FSKSKDKPEGLY+RMGFSLV IEDSTKLTIRITFRQR NWQNMEKKWACQSMCTWAIK++CD + ISY LPEVP+++K KS+
Sbjct:  941 MIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSG-SNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKKSA 1133          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: D7FX36_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 5.030e-93
Identity = 147/194 (75.77%), Postives = 166/194 (85.57%), Query Frame = 0
Query:    1 MIGTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYSRMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPLRIKDKSS 194
            MIGTAASNLM+AVLFIFVSRLYDVGDRVHIY     T G EP +V VVKVDL TT F+RWDEQ+FY+PNHLLA KTIVNIQR AHQWHEF I VAA+T S+KLE LH +LQ F+K KDKPEGL+ RMGFSL GIEDST+L+IRI FRQR NWQNM+KKWACQSMCTWAIKN+CD +GI+Y LPEVP+ +K+K S
Sbjct:  833 MIGTAASNLMSAVLFIFVSRLYDVGDRVHIY-DDVQTAGVEPMNVVVVKVDLRTTSFRRWDEQIFYIPNHLLADKTIVNIQRTAHQWHEFYIHVAATTSSQKLETLHDALQKFAKKKDKPEGLHPRMGFSLTGIEDSTRLSIRIIFRQRGNWQNMDKKWACQSMCTWAIKNACDTIGITYYLPEVPIVMKNKIS 1025          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 1.030e-92
Identity = 147/194 (75.77%), Postives = 165/194 (85.05%), Query Frame = 0
Query:    1 MIGTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYSRMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPLRIKDKSS 194
            MIGTAASNLM AVLFIFVSRLYDVGDRVHIY     T G EP +V V KVDL TT F+RWDEQ+FY+PNHLLA+KTIVNIQR AHQWHEF I VAA+T S+KLE LH +LQ F+K KDKPEGLY RMGFSL GIEDST+L+IRI FRQR NWQ+MEKKWACQSMCTWAIKN+CD +GI+Y LPEVP+ +K+K S
Sbjct:  974 MIGTAASNLMTAVLFIFVSRLYDVGDRVHIY-DDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKKKDKPEGLYPRMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVMKNKMS 1166          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 3.510e-67
Identity = 127/203 (62.56%), Postives = 140/203 (68.97%), Query Frame = 0
Query:    1 MIGTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYSRMGFSLVGIEDSTKLTIRITFRQRANWQ---------NMEKKWACQSMCTWAIKNSCDKMGISYALPEVPLRIKDKSS 194
            MIGTAASNLM+AVLFIFVSRLYDVGDRVHIY+G S T+GEEPT+VTVVKVDLMTTVFKRWDEQ                                             SLQ FSKSKDKPEGLY RMGFSLV IEDSTKLTIRITFRQR NWQ         NMEKKWACQSMCTWAIK++CD + ISY LPE+P+++K+KS+
Sbjct:  989 MIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSG-SNTRGEEPTNVTVVKVDLMTTVFKRWDEQA--------------------------------------------SLQEFSKSKDKPEGLYPRMGFSLVRIEDSTKLTIRITFRQRGNWQVGQEAIVVVNMEKKWACQSMCTWAIKSACDSLNISYFLPEIPVQMKEKSA 1146          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: A0A835YNP7_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 9.930e-60
Identity = 92/188 (48.94%), Postives = 133/188 (70.74%), Query Frame = 0
Query:    1 MIGTAASNLMAAVLFIFVSRLYDVGDRV-HIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYSRMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPL 187
            +IG A++NL A+++FIFV R +DVGDRV H +  G      E  +  V ++DL+ T F+ WDE+V+Y+PNH+LA + I+NIQR+  QWHEF IQV ASTPS+KL  L      F++  +KP G++  + F+L G+E++ +LTIR+ FRQ+ NWQ + +KWA QSMCT  I NSC ++GI+Y  P++PL
Sbjct:   90 LIGPASANLFASIVFIFVQRPFDVGDRVFHWFPDGRG----EMQNAVVTRIDLLITCFRAWDEKVYYLPNHVLATRPIINIQRSGDQWHEFFIQVLASTPSQKLWELKAKCVEFAEKHNKPSGIHPHIQFALTGVENTNRLTIRVCFRQKGNWQILSRKWAVQSMCTNCIVNSCKELGITYTQPQLPL 273          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: A0A058ZGC3_FONAL (EF-hand domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZGC3_FONAL)

HSP 1 Score: 102 bits (255), Expect = 7.030e-22
Identity = 56/176 (31.82%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    3 GTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYSRMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGI 178
            G +A  +   V+++FV   YDVGDRV I          +  +  V ++++  TVF+RWDEQ F++PNH+L  K ++NI+R+ +Q H F + + A T S++L  L   +Q + +S+  PE     + F L  ++   ++ + IT  Q +NWQ+   +W  ++        SC ++GI
Sbjct: 2102 GHSAQRMFDNVIYLFVEHPYDVGDRVFI----------DDHNFIVARMNITATVFRRWDEQYFWIPNHILTDKVVINIRRSGNQRHTFYMFLDADTTSEQLGTLRGMMQGWVESQ--PERFARDVDFILFDVDTHGRMQMLITIGQLSNWQDGAVRWKNRTDSWLFFLQSCRELGI 2265          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.640e-21
Identity = 60/191 (31.41%), Postives = 106/191 (55.50%), Query Frame = 0
Query:    3 GTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKS-----KDKPEGLY-SRMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPL 187
            G++AS    +++F+FV++ YDVGD V+       T GE+   VT  +++++TTVF+RWD Q   + N+++AKK I N  R++   H  MI V+  TP +KL+ +   + A  +      +    GL    + + + G+ D  +L++ +  +QR N  NM +++   ++    +   C++ GISY LP  PL
Sbjct:  820 GSSASAFFESIVFVFVTKAYDVGDPVYFV---DDTGGEDWYIVT--RINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHCHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPL 1005          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.980e-20
Identity = 58/196 (29.59%), Postives = 105/196 (53.57%), Query Frame = 0
Query:    3 GTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYS----RMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPLRIKDKSS 194
            G++A+N   + +FIFV+R YDVGDRV+I       +  +  +  V +++++TTVF+RWD+    +PN  LAK+ I N++R+        + V+ +TP  KLEAL   +Q ++++   P  LYS     + +    +   T + +   + Q+ +WQ+   K     + +  +   C ++G+ YALP   + +K   S
Sbjct:  949 GSSAANFFESCVFIFVTRAYDVGDRVYI-----KDELNDEANYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKERMQEYARAVTGP--LYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQGVTLKTPHS 1137          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: D8LMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN4_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.920e-19
Identity = 58/174 (33.33%), Postives = 94/174 (54.02%), Query Frame = 0
Query:   20 RLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAF-----SKSKDKPEGLY-SRMGFSLVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPL 187
            R YDVGD V+       T GE+   VT  +++++TTVF+RWD Q   + N+++AKK I N  R++   H  MI V+  TP +KL+ + + + A       + K    GL    + F + G+ D  +L++ +  +QR N  NM +++   S+    +   C++ GISY LP  PL
Sbjct:   11 RAYDVGDPVYFV---DDTGGEDWYIVT--RINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHKHGLGGLLPDTVDFQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPL 179          
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Match: A0A167LJ94_PHYB8 (EF-hand domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167LJ94_PHYB8)

HSP 1 Score: 94.4 bits (233), Expect = 5.590e-19
Identity = 57/190 (30.00%), Postives = 92/190 (48.42%), Query Frame = 0
Query:    3 GTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKVDLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPSKKLEALHTSLQAFSKSKDKPEGLYSRMGFS--LVGIEDSTKLTIRITFRQRANWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPLRIK 190
            G +A +   A++F+FV+  +D GDRV I        G E  +  V  V L+ T F +WD  + Y  N +LA + I+N +R         I V  STP  K+  L   +  +S    K   LY+    S  ++  E+  ++TI   F    NWQ+   +W   +     +K +C+++GISY +P  P+ +K
Sbjct:  690 GNSAKDAFEAIIFVFVTHPFDAGDRVFI--------GSE--NWVVNNVGLLVTTFNKWDGSIVYAKNSILATQYIINCRRTGRTCEGIDIHVHFSTPGWKINRLRDEMFEWSNKFPK---LYTPDSTSANIISFENLNRITISFYFEHTQNWQDAGGRWMRHNNYMMELKETCERLGISYTMPNQPVDLK 866          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6246.14847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX37_ECTSI2.360e-10485.05Small Conductance Mechanosensitive Ion channel n=1... [more]
D7FX36_ECTSI5.030e-9375.77Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A6H5JBC1_9PHAE1.030e-9275.77EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JDS1_9PHAE3.510e-6762.56EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNP7_9STRA9.930e-6048.94Mechanosensitive ion channel-domain-containing pro... [more]
A0A058ZGC3_FONAL7.030e-2231.82EF-hand domain-containing protein n=1 Tax=Fonticul... [more]
A0A6H5JSR3_9PHAE1.640e-2131.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNU8_9STRA1.980e-2029.59Mechanosensitive ion channel-domain-containing pro... [more]
D8LMN4_ECTSI1.920e-1933.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A167LJ94_PHYB85.590e-1930.00EF-hand domain-containing protein n=1 Tax=Phycomyc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006685Mechanosensitive ion channel MscSPFAMPF00924MS_channelcoord: 7..179
e-value: 2.9E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR31323FAMILY NOT NAMEDcoord: 2..187
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.591
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 11..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6246contigL-elsbetiae_contig6246:1946..7767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6246.14847.1mRNA_L-elsbetiae_contig6246.14847.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6246 1865..7770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6246.14847.1 ID=prot_L-elsbetiae_contig6246.14847.1|Name=mRNA_L-elsbetiae_contig6246.14847.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MIGTAASNLMAAVLFIFVSRLYDVGDRVHIYAGGSATKGEEPTDVTVVKV
DLMTTVFKRWDEQVFYMPNHLLAKKTIVNIQRAAHQWHEFMIQVAASTPS
KKLEALHTSLQAFSKSKDKPEGLYSRMGFSLVGIEDSTKLTIRITFRQRA
NWQNMEKKWACQSMCTWAIKNSCDKMGISYALPEVPLRIKDKSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006685MscS_channel
IPR010920LSM_dom_sf