prot_L-elsbetiae_contig6230.14828.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6230.14828.1
Unique Nameprot_L-elsbetiae_contig6230.14828.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length525
Homology
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BLAST of mRNA_L-elsbetiae_contig6230.14828.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 550 bits (1418), Expect = 1.790e-190
Identity = 317/528 (60.04%), Postives = 372/528 (70.45%), Query Frame = 0 
Query:    1 MEKQNTSRLAMTWKDRQRTRLPVVDLDDNPFCVERRTNEEWHMIQLNKARESLPYCCSPSLVHMTSADVPRTASFMVDTEKPFRDFSKKKRNLLAWSLRASSASEMALRGSENGKPQSTRRMSRTVPSDPRETDITDFFKQEQKPLDR-RGPADRVDVDIDTLPNLEPYRREVVAQQSITFGHRPSSASRMFNPCTMATSCGIPSGGDS-STSGNGGRKGRASSTRGGASRTQRQPHLKKGRGRKPRRTTGLSAPMLKALLRGDNPTAADSGGEKAAVATVHGSDIHKVDFDLTISNNDQNSPTTSKYLVVNRRDDFSDS-VNCDRLNESMWRPVDPAG-GEARGELKAPWLTNSGLGGESCEQRGLGDSVEELELRRIFSSERPPWDGTPAPLPAPRNVRRAISSLLMPDPDERLRDKIIKTRKAAAGIPVTASSTKDERDQALRPFNSTPSGRWEACPATPRAVVAREEIKQLSEVRRERDSAMAKRVRQAELRVFFNKIAPCEKLYRNTLQAAQERFRHERAVAV 524
            +E QN +RLAMTWKDRQRTR+PVVDLDDNPFCVERRTNEEWHM+QLNK                                KPFR+FS+KKRNLLAWS+RA+SAS+ A + + N     TRR+S TV SD   TDI +FF  E+    R   P DRV+VD+DTLP LEPYRREVVAQQ ITFGHRP SASRMFNPCTMATSCGIPS G   ST G  GRK      +GG          + GR  KPRRTTGLSAPMLKALLRGD PT    GG     A+ H  ++ + + ++      ++S     YLV++ ++D +DS VN ++L+ES WR VD  G GEA GEL++ WL  S   G    +R LG++ E  EL RIFSSERPPWDG PAPLPAP++ RRAISSLLMPDPDERLRDK+IK+RKAAAG+PVTASSTKDER++ LRPFN TP GRWE CPATPRAV+AR+EI++LSE+R ERD AMAK+VRQAEL V F KIAP EKLYRNTLQ AQERFRH+   A+
Sbjct:   10 LEGQNAARLAMTWKDRQRTRVPVVDLDDNPFCVERRTNEEWHMMQLNK--------------------------------KPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTRRLSTTVRSDLDGTDIGEFFNMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRK------KGGGGHXXXXXXXR-GRNSKPRRTTGLSAPMLKALLRGDTPTG--EGGAALVTASQHQQELFEPNGNIV----SRDSAPKPNYLVLDGQEDLTDSSVNSEKLDESKWRSVDDLGRGEALGELES-WLQTSSHSGLGHGRRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQGTAAI 491
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6230.14828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE1.790e-19060.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 464..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6230contigL-elsbetiae_contig6230:6818..10190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6230.14828.1mRNA_L-elsbetiae_contig6230.14828.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6230 6797..10190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6230.14828.1 ID=prot_L-elsbetiae_contig6230.14828.1|Name=mRNA_L-elsbetiae_contig6230.14828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=525bp
MEKQNTSRLAMTWKDRQRTRLPVVDLDDNPFCVERRTNEEWHMIQLNKAR
ESLPYCCSPSLVHMTSADVPRTASFMVDTEKPFRDFSKKKRNLLAWSLRA
SSASEMALRGSENGKPQSTRRMSRTVPSDPRETDITDFFKQEQKPLDRRG
PADRVDVDIDTLPNLEPYRREVVAQQSITFGHRPSSASRMFNPCTMATSC
GIPSGGDSSTSGNGGRKGRASSTRGGASRTQRQPHLKKGRGRKPRRTTGL
SAPMLKALLRGDNPTAADSGGEKAAVATVHGSDIHKVDFDLTISNNDQNS
PTTSKYLVVNRRDDFSDSVNCDRLNESMWRPVDPAGGEARGELKAPWLTN
SGLGGESCEQRGLGDSVEELELRRIFSSERPPWDGTPAPLPAPRNVRRAI
SSLLMPDPDERLRDKIIKTRKAAAGIPVTASSTKDERDQALRPFNSTPSG
RWEACPATPRAVVAREEIKQLSEVRRERDSAMAKRVRQAELRVFFNKIAP
CEKLYRNTLQAAQERFRHERAVAV*
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