prot_L-elsbetiae_contig6227.14820.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6227.14820.1
Unique Nameprot_L-elsbetiae_contig6227.14820.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length145
Homology
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BLAST of mRNA_L-elsbetiae_contig6227.14820.1 vs. uniprot
Match: A0A6H5K0Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y0_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 3.760e-79
Identity = 121/145 (83.45%), Postives = 130/145 (89.66%), Query Frame = 0 
Query:    1 MGEDSIVSGVPSSISHRLASQSSSLQHRYFGPGPKVFPDAIFFILVVSQWFLAGWSVVGAALYFRLFNGNRTCSPLLRHWTLLVVIIGFLSCLLAVCYSGIMCCMLGGPFS-SRRRNGGSERDRFQGDVPSSSDGSGSSANPGLM 144
            MG++SIVSGVPS+ISHRLA+QSSSLQHRYFGPGPKVFPD IFFILVVSQWFLAGWSVVGAALYFRLF GNR CSPLLRHWTLLVVIIGFLSCLLAVCYSGIMCCMLG PFS SR RNG  ERD+F  D+PSSSD + +   PG+M
Sbjct:   97 MGDESIVSGVPSTISHRLAAQSSSLQHRYFGPGPKVFPDTIFFILVVSQWFLAGWSVVGAALYFRLFTGNRMCSPLLRHWTLLVVIIGFLSCLLAVCYSGIMCCMLGAPFSRSRGRNGSGERDQFHADLPSSSDSTSTGNEPGMM 241
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BLAST of mRNA_L-elsbetiae_contig6227.14820.1 vs. uniprot
Match: D7FV38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV38_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 3.020e-57
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 0 
Query:    1 MGEDSIVSGVPSSISHRLASQSSSLQHRYFGPGPKVFPDAIFFILVVSQWFLAGWSVVGAALYFRLFNGNRTCSPLLRHWTLLVVIIGFLSCLLAVCYSG 100
            MG++SIVSGVPS+ISHRLA+QSSSLQHRYFGPGPKVFPD IFFILVVSQWFLAGWSVVGAALYFRLF GNRTCSPLLRHWTLLVVIIGFLSCLLAVC  G
Sbjct:  154 MGDESIVSGVPSTISHRLAAQSSSLQHRYFGPGPKVFPDTIFFILVVSQWFLAGWSVVGAALYFRLFTGNRTCSPLLRHWTLLVVIIGFLSCLLAVCSWG 253
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6227.14820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0Y0_9PHAE3.760e-7983.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV38_ECTSI3.020e-5792.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..101
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6227contigL-elsbetiae_contig6227:3687..8510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6227.14820.1mRNA_L-elsbetiae_contig6227.14820.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6227 3530..8939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6227.14820.1 ID=prot_L-elsbetiae_contig6227.14820.1|Name=mRNA_L-elsbetiae_contig6227.14820.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
MGEDSIVSGVPSSISHRLASQSSSLQHRYFGPGPKVFPDAIFFILVVSQW
FLAGWSVVGAALYFRLFNGNRTCSPLLRHWTLLVVIIGFLSCLLAVCYSG
IMCCMLGGPFSSRRRNGGSERDRFQGDVPSSSDGSGSSANPGLM*
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