prot_L-elsbetiae_contig6220.14815.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6220.14815.1
Unique Nameprot_L-elsbetiae_contig6220.14815.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length231
Homology
BLAST of mRNA_L-elsbetiae_contig6220.14815.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 5.550e-67
Identity = 122/231 (52.81%), Postives = 156/231 (67.53%), Query Frame = 0
Query:    1 MLVMDGISDAWVESFWVRGLYDPDTDATTPAVSGLGTTGVLIANSQNVTCENMEVRNFDGDAMVVRNSNIVNIDARRYDHEMPALDIGQSRGTGLVVDTSDAVWVRRHDVEENGVAGIHIMASNNFTFEGPRGSESGPAGQGFVGSSDGPQPIEVIVESSSLVTFNDVYILSANDPVITVSADSSTVAFNGCSFEQIATGTCXXXXXXXXXXXXXXXXXX-TLEGNCFVKV 230
            ++VMDGI DAW+E  W++G YDP+TD  + AVSGLG+  + + NSQN+TCE +++R   GDA+VVR+S +VNIDA RYD E     IG S GTGL+VDTSD++WVRR    EN VAG+HIM SNNFTFE    SE G  G+G VGS DG QPIEVIV +SSLVTF D+ + S NDPV+T++ DS+TV+F    +  + +GTC                    LEG C+VKV
Sbjct:  934 IVVMDGIRDAWIEKVWIQGNYDPETDGIS-AVSGLGSACLSVVNSQNITCEGVDIRYCSGDALVVRDSTLVNIDAGRYDEEYLPWTIGLSGGTGLIVDTSDSIWVRRTTFYENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162          
BLAST of mRNA_L-elsbetiae_contig6220.14815.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 2.610e-63
Identity = 118/235 (50.21%), Postives = 150/235 (63.83%), Query Frame = 0
Query:    1 MLVMDGISDAWVESFWVRGLYDPDTDATTPAVSGLGTTGVLIANSQNVTCENMEVRNFDGDAMVVRNSNIVNIDARRYDHEMPALDIGQSRGTGLVVDTSDAVWVRRHDVEENGVAGIHIMASNNFTFEGPRGSESGP-----AGQGFVGSSDGPQPIEVIVESSSLVTFNDVYILSANDPVITVSADSSTVAFNGCSFEQIATGTCXXXXXXXXXXXXXXXXXXTLEGNCFVKV 230
            ++VMDGISDA +   W+ G YD +T   TPAV GLG+ G+ I  S N+TC    V + DGDA+VVR+S +VNIDA  YD E     IGQSRGTG+VVD+SD+VW+RR+   +NG+AGIH+  SNNFTFE     E         G+G VGS DG QPIEVIVESS+LV F D+ + S NDPV+TVS  SS V+F+ C F  + +GTC                  +L+G C+VKV
Sbjct:  916 IIVMDGISDARLSEVWIYGHYDSETSNDTPAVDGLGSVGLSITGSTNITCRYASVYSSDGDALVVRDSEMVNIDAGPYDEEYRPWTIGQSRGTGIVVDSSDSVWIRRYTTSDNGIAGIHVSGSNNFTFEATIADECWTDDCVLEGEGNVGSLDGQQPIEVIVESSTLVKFQDMKVQSVNDPVMTVSG-SSGVSFDNCGFSNVESGTCVIQTDATSEVTTGDDPELSLDGTCYVKV 1149          
BLAST of mRNA_L-elsbetiae_contig6220.14815.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 6.780e-63
Identity = 114/231 (49.35%), Postives = 156/231 (67.53%), Query Frame = 0
Query:    1 MLVMDGISDAWVESFWVRGLYDPDTDATTPAVSGLGTTGVLIANSQNVTCENMEVRNFDGDAMVVRNSNIVNIDARRYDHEMPALDIGQSRGTGLVVDTSDAVWVRRHDVEENGVAGIHIMASNNFTFEGPRGSESGPAGQGFVGSSDGPQPIEVIVESSSLVTFNDVYILSANDPVITVSADSSTVAFNGCSFEQIATGTCXXXXXXXXXXXXXXXXXX-TLEGNCFVKV 230
            M+VMDGIS+A  ++ W+RG YDPDT   TPAV GLG+TG+ +  S N+T  + E+R  DGDA+VVR+SN+++IDA  Y+       +  SRGTGL+VD+ D+++VRRH + ENGVAGIHI+ +NNFTF+   G ES   G+G VG+ DG QPI+VI+ESS+LVTFND+ + S+NDP++ VS DSSTV+FN      +    C                   TL+G+C+VKV
Sbjct:  926 MVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPGLGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMISIDAGEYEELYSPWSLASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEES-TVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVS-DSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154          
BLAST of mRNA_L-elsbetiae_contig6220.14815.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 9.460e-61
Identity = 115/235 (48.94%), Postives = 150/235 (63.83%), Query Frame = 0
Query:    1 MLVMDGISDAWVESFWVRGLYDPDTDATTPAVSGLGTTGVLIANSQNVTCENMEVRNFDGDAMVVRNSNIVNIDARRYDHEMPALDIGQSRGTGLVVDTSDAVWVRRHDVEENGVAGIHIMASNNFTFEGPR-----GSESGPAGQGFVGSSDGPQPIEVIVESSSLVTFNDVYILSANDPVITVSADSSTVAFNGCSFEQIATGTCXXXXXXXXXXXXXXXXXXTLEGNCFVKV 230
            M+VMD IS+A + + W+ G YD +T   TP V GLG+ G+ I  S N+TC +  V + DGDA+VVR+S ++NID+  YD +     IGQSRGTG+VVD+SD+VWVRR+   +NGVAGIH+  SNNFTFE        G +    G+G VGS DG QPIEV+VESS+LV F D+ + S NDPVI VS  SS V+F+ C F  + TGTC                  +L+G C+VKV
Sbjct:  731 MIVMDNISNARLSNTWIIGNYDSETSNDTPTVHGLGSVGLSITGSTNITCIDASVYSSDGDALVVRDSQMINIDSGPYDDDYLPWTIGQSRGTGIVVDSSDSVWVRRYTTYDNGVAGIHVSGSNNFTFEATIADKCWGEDCVLEGEGNVGSLDGQQPIEVVVESSTLVKFQDMKVQSVNDPVIVVSG-SSGVSFDNCGFSNVETGTCVIQTDTTSEVTTGDDPELSLDGTCYVKV 964          
BLAST of mRNA_L-elsbetiae_contig6220.14815.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 6.090e-37
Identity = 97/231 (41.99%), Postives = 125/231 (54.11%), Query Frame = 0
Query:    1 MLVMDGISDAWVESFWVRGLYDPDTDATTPAVSGLGTTGVLIANSQNVTCENMEVRNFDGDAMVVRNSNIVNIDARRYDHEMPALDIGQSRGTGLVVDTSDAVWVRRHDVEENGVAGIHIMASNNFTFEGPRGSESGPAGQGFVGSSDGPQPIEVIVESSSLVTFNDVYILSANDPVITVSADSSTVAFNGCSFEQIATGTCXXXXXXXXXXXXXXXXXXT-LEGNCFVKV 230
            M+VMDGISDA +   W+ GLYDPDT   +PAV GLG+TGV I +SQN+TC +  V   DGDAMVVR+S++VNIDA  YD         + + TG  V TS   W                + S    + G          QG VGS +G QPIEVIVE SSL+ F ++++ S NDPV+T+S DS+ V+F       +A+GTC                    LEG C+VKV
Sbjct:  763 MIVMDGISDARIGDLWIHGLYDPDTSNDSPAVPGLGSTGVSIVDSQNITCADTWVDFCDGDAMVVRSSSVVNIDAGYYD---------EYKATGWRVCTS---WTPT------------TLPSKPPIYVGS---------QGQVGSLEGQQPIEVIVEGSSLINFQEMWVRSVNDPVMTIS-DSTAVSFTNDGSYSVASGTCIIQTDDPSTVTIDPDEDELILEGTCYVKV 959          
BLAST of mRNA_L-elsbetiae_contig6220.14815.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.080e-24
Identity = 78/196 (39.80%), Postives = 107/196 (54.59%), Query Frame = 0
Query:   46 QNVTCENMEVRNFDGDAMVVRNSNIVNIDARRYD-HE-MPALDI-------GQSRGTGLVVDTSDAVW-VRRHDVEENGVAGIHIMASNNFTFEGPRGSESGPAGQGFVGSSDGPQPIEVIVESSSLVTFNDVYILSANDPVITVSADSSTVAFNGCSFEQIATGTCXXXXXXXXXXXXXXXXXX-TLEGNCFVKV 230
            QNVTCE +++R   GDA+VVR+S +V+IDA RYD HE +P++D          SR  GL + +   V   RR     +G+   ++ +++            GP G G VGS DG QPIEVIVESSSLV F D  + S NDPV+T++ DS+TV+F    +  + +GTC                    LEG C+VKV
Sbjct:  311 QNVTCEGVDIRYCSGDALVVRDSTLVSIDAGRYDEHEGVPSVDYRPKPRHRSDSRHVGLRLSSPAHVTRQRRGGSPHHGLEQFYLRSNHR----------RGPEGAGNVGSVDGQQPIEVIVESSSLVKFQDKPVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQADDPSTVTIDADEDELVLEGTCYVKV 495          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6220.14815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KFA6_9PHAE5.550e-6752.81F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FTH1_ECTSI2.610e-6350.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KL74_9PHAE6.780e-6349.35F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5KH45_9PHAE9.460e-6148.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZZ4_ECTSI6.090e-3741.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUI8_ECTSI1.080e-2439.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 3..229
e-value: 4.4E-9
score: 37.8
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 39..208
e-value: 6.8E-9
score: 35.8
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6220contigL-elsbetiae_contig6220:6978..10968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6220.14815.1mRNA_L-elsbetiae_contig6220.14815.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6220 6975..11004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6220.14815.1 ID=prot_L-elsbetiae_contig6220.14815.1|Name=mRNA_L-elsbetiae_contig6220.14815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MLVMDGISDAWVESFWVRGLYDPDTDATTPAVSGLGTTGVLIANSQNVTC
ENMEVRNFDGDAMVVRNSNIVNIDARRYDHEMPALDIGQSRGTGLVVDTS
DAVWVRRHDVEENGVAGIHIMASNNFTFEGPRGSESGPAGQGFVGSSDGP
QPIEVIVESSSLVTFNDVYILSANDPVITVSADSSTVAFNGCSFEQIATG
TCVIQADDPSTVMTGDNDELTLEGNCFVKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence