prot_L-elsbetiae_contig6220.14814.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6220.14814.1
Unique Nameprot_L-elsbetiae_contig6220.14814.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length400
Homology
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BLAST of mRNA_L-elsbetiae_contig6220.14814.1 vs. uniprot
Match: D8LFW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW3_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 3.180e-24
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 0 
Query:    1 MISCVLEFVEDTQFLFVAGLSTRWKGGWENQRRPKTTRAITEHTTPSQLACSFKCGLRRRAEVCEAVAALGRLDLLKCARENYCRWGRS 89
            ++ C+ +FV D Q LF AG+ST W+  W   RRP +TRAITEH TPSQL  SF CGLR+RAEVCEA+A  G+L++LK ARE  C WGRS
Sbjct:   39 IVRCLADFVHDEQHLFFAGVSTLWREAWG--RRPTSTRAITEHVTPSQLCWSFSCGLRKRAEVCEAIAGFGKLEVLKRARELKCPWGRS 125
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BLAST of mRNA_L-elsbetiae_contig6220.14814.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.180e-17
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:    1 MISCVLEFVEDTQFLFVAGLSTRWKGGWENQRRPKTTRAITEHTTPSQLACSFKCGLRRRAEVCEAVAALGRLDLLKCARENYCRWGRS 89
            ++S V EFV+D Q+LF A +S  W+  W   +RP  T+A+T  T+  QL+ SF+CGLRR A VCE VA LGRLDLL+ AR   C+W  +
Sbjct:    9 IVSTVAEFVDDNQYLFFASVSRGWRDVWG--KRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCQWNEN 95
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BLAST of mRNA_L-elsbetiae_contig6220.14814.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.160e-16
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:    1 MISCVLEFVEDTQFLFVAGLSTRWKGGWENQRRPKTTRAITEHTTPSQLACSFKCGLRRRAEVCEAVAALGRLDLLKCARENYCRWGRS 89
            ++S V EFV+D Q+LF A +S  W+  W   +RP  T+A+T  T+ SQL+ SF+CGLRR A VCE VA LGRLDLL+ AR   C W  +
Sbjct:   11 IVSTVGEFVDDNQYLFFASVSRGWRDVWG--KRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCPWNEN 97
[Close]
BLAST of mRNA_L-elsbetiae_contig6220.14814.1 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.450e-16
Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0 
Query:    6 LEFVEDTQFLFVAGLSTRWKGGWENQRRPKTTRAITEHTTPSQLACSFKCGLRRRAEVCEAVAALGRLDLLKCARENY-CRW 86
            +EFV   Q+LF AG+S  W+  WE   RP TTRA+T  T   QL+ SF+CGL RR+ VC+ +AALGRLDLL  ARE Y C W
Sbjct:    1 MEFVGGEQYLFFAGVSRTWRDAWEG--RPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPW 80
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6220.14814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LFW3_ECTSI3.180e-2460.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0J7_9PHAE1.180e-1750.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMS7_ECTSI1.160e-1651.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8W5_ECTSI1.450e-1656.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 196..383
e-value: 1.8E-10
score: 42.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 30..195
e-value: 1.9E-6
score: 29.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 86..372
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 226..387
coord: 63..249
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 226..387
coord: 63..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6220contigL-elsbetiae_contig6220:2695..3894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6220.14814.1mRNA_L-elsbetiae_contig6220.14814.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6220 2627..4862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6220.14814.1 ID=prot_L-elsbetiae_contig6220.14814.1|Name=mRNA_L-elsbetiae_contig6220.14814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=400bp
MISCVLEFVEDTQFLFVAGLSTRWKGGWENQRRPKTTRAITEHTTPSQLA
CSFKCGLRRRAEVCEAVAALGRLDLLKCARENYCRWGRSTCIAAADQGHL
GVLQYARRNGCAWGEMVCAAAAKRGFLHILQWARQNNCYWNGWTPQYAAE
EGHLDVLQWCAENKCMKGNHPCKAAAGAGRLEVLRWLRENGFPWDHMTMR
AAAEGGHSEVLYYCLENDAPWDASTCRAAARGGHLGVLRWLRSKGAPWDD
SVCRDAARWGHGDVLEWARANGCPWGEYTSREAARGGHLGLLRWCREAGL
PVGVRTSCAAAWGGHLEVLQWLREVGCPWDEMTCSCAAGGGHMDVLRWAR
ENGCPWDSRTIECAKKRKHPDIAKWAAELGCPSPPPTPAPTPAATPTPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf