mRNA_L-elsbetiae_contig6218.14809.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A6H5JJB7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJB7_9PHAE) HSP 1 Score: 227 bits (578), Expect = 6.400e-72 Identity = 114/122 (93.44%), Postives = 120/122 (98.36%), Query Frame = 1 Query: 28 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 393 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALA+ASLACSAASICWTWGY LKAKGWRNLGTLAE+DDAQ+RMR SL+MGLYINVAGMLLAL+GAEQIVGTLVAKVLY+QG Sbjct: 143 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALAVASLACSAASICWTWGYNLKAKGWRNLGTLAEVDDAQVRMRGSLRMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQG 264
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A836CL61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL61_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.820e-35 Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 1 Query: 28 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGW--RNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 393 ++ W SWW+QTILSTV+ II+LFSNA+T RS RGN LGNGV LA ++A + AS+ WTW LKA W RN + +AQ + +LK+G++IN+ G L AL+GAEQIVGTLVAKVLYS G Sbjct: 106 RLGWFSWWSQTILSTVSAIIILFSNAITERSVRGNALGNGVFLAGLAVASAGASMFWTWTLILKATAWVGRNEKKRSTPTEAQRNIIRALKVGVWINLLGALFALVGAEQIVGTLVAKVLYSGG 229
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A7S2V450_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V450_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.190e-26 Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 28 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQ 390 +++W+SWW Q IL+TVA +IL F+ AVT+ R N L NG LA + SI WTWG A+ W+ T +LD A M N LK + IN+ GML+AL+GAEQIVGTLVAK+L +Q Sbjct: 90 RIAWISWWTQVILTTVAGVILFFTTAVTDPG-RANFLVNGTFLAGCGVTLGLISIFWTWGIARAARRWKRRST--DLDQACASMGNRLKAAVLINLMGMLVALVGAEQIVGTLVAKILQTQ 207
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A7S3XU47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU47_HETAK) HSP 1 Score: 105 bits (262), Expect = 1.210e-24 Identity = 60/120 (50.00%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 34 SWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 393 +W SWWAQ ILSTVA +IL F++A+T+ R N+ NG LA + S WTWGY AK W+ G A+L+ Q M L+ G ++N GM +AL GAEQIVGTLVAKVL +QG Sbjct: 109 AWTSWWAQVILSTVAGVILFFASAITDP--RVNMFMNGTLLAGCGVFFGLVSTFWTWGYASAAKRWKRPG--ADLEKLQRAMLRRLEFGHFVNTLGMAVALTGAEQIVGTLVAKVLSAQG 224
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A0M0JU81_9EUKA (Copper uptake transmembrane transporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU81_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 2.780e-19 Identity = 55/121 (45.45%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 31 VSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLG--TLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYS 387 + W+SWW+Q ILST++ ++LLF+N VT R ILG AL L L + AS WT Y A R LG T +DA R N +G ++N+ GM+L L+GAE IVGTL AK L S Sbjct: 20 IGWVSWWSQAILSTISAVLLLFANTVTVRPTALTILGR--ALTLGGLVAAIASTLWTVAYGRLA---RRLGRATPPTAEDAAERAANIATVGTWLNIVGMVLCLLGAEAIVGTLAAKALQS 135
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: L1JCY2_GUITC (Translocon at the inner envelope membrane of chloroplast 21 like protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCY2_GUITC) HSP 1 Score: 87.0 bits (214), Expect = 1.120e-18 Identity = 57/132 (43.18%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 28 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRN---SLKMGLYINVAGMLLALIGAEQIVGTLVAK-----VLYSQGEG 399 Q SWLSWWAQ ILS ++ I L F+NAV +GNIL NGV +A LA S ++ WT GY R E +A + R+ ++++G+ + + GM L L+GAEQIVGTLVAK +L + G G Sbjct: 3 QSSWLSWWAQVILSVISAITLFFANAVRGPM-QGNILANGVFMAGLGLALSFINVIWTTGYQ------RIAAKQLETPEAAMSFRSFSRTVRVGVIVALTGMFLTLLGAEQIVGTLVAKSISGSILIANGGG 127
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A7S1XJJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJJ2_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.190e-18 Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 28 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVA----LALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 393 + W SWW QT+L+ +A I LLF+ + + +G A LA ++ SA S+ WTWG+T A+ R L +A+L +R +L+ G+ +N+ GM L GAEQIVGTLVAKVL QG Sbjct: 28 RAGWTSWWIQTVLTVIASITLLFARTFAAAAGGSTAIQSGGAGGLFLAGLGVSLSALSVFWTWGFTRVARRLRKGEDLTPRLEARL-IRRALRTGIVLNLVGMFATLFGAEQIVGTLVAKVLSFQG 152
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A4D9D048_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D048_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.630e-18 Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 34 SWLSWWAQTILSTVAFIILLFSNAVTNRSARG------NILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 393 +W SWWAQ I +TVA +IL F+N+ S G +I NG A + L A SI WTWG+T AK R + E + +R ++ + IN+ G+L ALIGAEQ VG L+A+VL QG Sbjct: 105 AWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAASGLCLGAISIFWTWGFTGVAKRIRR--AVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQG 228
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A7S0GKD1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKD1_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.140e-18 Identity = 51/120 (42.50%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 34 SWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 393 SW SWW Q ILSTV+ + LLF+ +V G G LA + + S S+ WTWG +K + + A L RN + +GL +N+ GM L L+GAEQIVG L AKVL QG Sbjct: 32 SWFSWWTQVILSTVSGVTLLFARSVLMSGIEGKKRGAEFILAGSGIVLSIISVFWTWGGARISKRLMRRPSTTRIKAANLLRRN-ISVGLTLNLLGMFLTLLGAEQIVGMLAAKVLTQQG 150
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Match: A0A8J5XCA0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCA0_DIALT) HSP 1 Score: 81.6 bits (200), Expect = 3.390e-16 Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 34 SWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAELDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQGEG 399 SW SWW Q ILS V+ + L F+NA + N L +G+ L+ A + C S W WGY AK R L +L + R SL++G+ IN+ GM L LI AEQ +G L K L +QG G Sbjct: 75 SWFSWWGQVILSVVSTVTLTFANAARGST---NPLLSGIVLSTAGVLCGFVSTFWMWGYQGFAK--RLLRADVDLTQLATQARRSLRLGISINLVGMALTLISAEQTIGVLAGKAL-TQGLG 190 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6218.14809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6218.14809.1 >prot_L-elsbetiae_contig6218.14809.1 ID=prot_L-elsbetiae_contig6218.14809.1|Name=mRNA_L-elsbetiae_contig6218.14809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp MKPLRCTPPQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVback to top mRNA from alignment at L-elsbetiae_contig6218:8277..9308- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6218.14809.1 ID=mRNA_L-elsbetiae_contig6218.14809.1|Name=mRNA_L-elsbetiae_contig6218.14809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1032bp|location=Sequence derived from alignment at L-elsbetiae_contig6218:8277..9308- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6218:8277..9308- >mRNA_L-elsbetiae_contig6218.14809.1 ID=mRNA_L-elsbetiae_contig6218.14809.1|Name=mRNA_L-elsbetiae_contig6218.14809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=822bp|location=Sequence derived from alignment at L-elsbetiae_contig6218:8277..9308- (Laminarionema elsbetiae ELsaHSoW15)back to top |