prot_L-elsbetiae_contig621.14800.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig621.14800.1
Unique Nameprot_L-elsbetiae_contig621.14800.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
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BLAST of mRNA_L-elsbetiae_contig621.14800.1 vs. uniprot
Match: A0A6H5JUI7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUI7_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.160e-52
Identity = 95/115 (82.61%), Postives = 102/115 (88.70%), Query Frame = 0 
Query:    1 MKTAFAVLALVAGASAFNVAVPAGRVSAARSSSTAVSAGGYVPDGLTAKQWEDMKKKKEVAAAKXXXEVAGKKFEDIDTFMKGMEAGKRGHTFAKVDESLEKLMPAGARGVKQDK 115
            MKTAFAV+AL AGASAFNVAVPA RV++ R+SSTAVSAG YVPDGLTA+QWEDMKK+K   AA    EVA KKFEDIDTFMKGMEAGKRGHTFAKVDESLEKL PAGARGVKQ+K
Sbjct:    1 MKTAFAVVALFAGASAFNVAVPASRVTSTRASSTAVSAG-YVPDGLTAQQWEDMKKEKAAKAAARKKEVASKKFEDIDTFMKGMEAGKRGHTFAKVDESLEKLPPAGARGVKQNK 114
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig621.14800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JUI7_9PHAE1.160e-5282.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.853

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig621contigL-elsbetiae_contig621:20860..22739 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig621.14800.1mRNA_L-elsbetiae_contig621.14800.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig621 20860..22739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig621.14800.1 ID=prot_L-elsbetiae_contig621.14800.1|Name=mRNA_L-elsbetiae_contig621.14800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
MKTAFAVLALVAGASAFNVAVPAGRVSAARSSSTAVSAGGYVPDGLTAKQ
WEDMKKKKEVAAAKRKKEVAGKKFEDIDTFMKGMEAGKRGHTFAKVDESL
EKLMPAGARGVKQDKK*
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