prot_L-elsbetiae_contig6209.14795.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6209.14795.1
Unique Nameprot_L-elsbetiae_contig6209.14795.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length110
Homology
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BLAST of mRNA_L-elsbetiae_contig6209.14795.1 vs. uniprot
Match: D8LD19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD19_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.360e-17
Identity = 40/60 (66.67%), Postives = 42/60 (70.00%), Query Frame = 0 
Query:   51 PCVGFSNASFGRFGNARRVWPPAHVQIAHPSIGVAALVNGGRFRARASFRDMIKGRGVAG 110
            PC GF+N    RFGN RRVWPP  VQIAHPS+GVA LVNG RFRARA   D IK    AG
Sbjct:   18 PCAGFTNFPASRFGNTRRVWPPPQVQIAHPSLGVATLVNGARFRARAGLGDFIKSAQGAG 77
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6209.14795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD19_ECTSI1.360e-1766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6209contigL-elsbetiae_contig6209:1453..2309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6209.14795.1mRNA_L-elsbetiae_contig6209.14795.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6209 1453..2309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6209.14795.1 ID=prot_L-elsbetiae_contig6209.14795.1|Name=mRNA_L-elsbetiae_contig6209.14795.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp
RAHSPHTQAPTYVPEREKEHTRATRIHHWLGPMAPRRRGTGQLLGGGMDA
PCVGFSNASFGRFGNARRVWPPAHVQIAHPSIGVAALVNGGRFRARASFR
DMIKGRGVAG
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