prot_L-elsbetiae_contig6185.14764.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6185.14764.1
Unique Nameprot_L-elsbetiae_contig6185.14764.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length390
Homology
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: D8LLF2_ECTSI (Kinetochore protein NDC80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLF2_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 7.960e-164
Identity = 310/395 (78.48%), Postives = 328/395 (83.04%), Query Frame = 0
Query:    1 MASRRRTTLAAVSSASLNSRGSMGTASSAGRSS----KQPSSRFSISTSSAGARSTMGGXXXXXXXX--GGRPSMGTSXXXXXXXXXXXXXXXXXMGRPXXXXXXXSTAGERKSGGVRRGSSFGTGGG-RSDHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAITTEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLRLALSDIEKITSLWEEIKTHERLLQEKVDKRAEEERRLK 388
            MA+RRRTTLAAVSSASLNSRGSMGT SS GRSS    KQPSSRFSI             XXXXXX    G RPSMGTSXXXXXXXXXXXXXXXXX  RP       STAG+RKS GVRR +SFGTGGG RSD RPLMDKAHL+ASLH+L  YL  HGYDQP+N K L  PSGRDFNNITGFLFRQLDPNY PSGRFE+DVVPFLKM RYPFTISKSSLAAVGAPQTWPKVMGAISWIVD+LLYDE IAVAEEEQR REREAT E+  +DKEDGVDDQ  D KNFV YLEEAYCCFLEGDDEAHQA+TTE++EARD EDAGAE+FL  LEE+NE+L QTNQELLDQGNSLP LEE L+L LSD EKITSL EEI+TH RLLQEKVDKR EEERRLK
Sbjct:    1 MAARRRTTLAAVSSASLNSRGSMGTTSS-GRSSLAXXKQPSSRFSIXXXXXXXXXXXXXXXXXXXRTSMGARPSMGTSXXXXXXXXXXXXXXXXXXXRPSM-----STAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLK 389          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: A0A836CEN5_9STRA (Kinetochore protein NDC80 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN5_9STRA)

HSP 1 Score: 195 bits (496), Expect = 5.010e-53
Identity = 122/289 (42.21%), Postives = 170/289 (58.82%), Query Frame = 0
Query:  104 GERKSGGVRRGSSFGTGGGRSDHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMPS--GRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAITTEF--SEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLRLALSDIEKITSLWEEIKTHERLLQEKVDKRAEEERRLK 388
            G + S G++R S+FGT   ++D RP+ DK   + S+  L++YL  +GYDQP++ K L  PSGRDFNNI GFLFRQ DP + PS   RFE++V+PFLK   YPFT+SKS L AVGAPQ+WPK + AISWIV+ L+YD+ +A  E EQ+ R     +        D  D        F +YL +AY CFL GD+ +  A+  +   +     +  GAE    +    N +L +  + +L +  +LP+L +  R   SD+EK   L  ++  H   L EKV+KRA EE R K
Sbjct:   40 GRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEV--------DIAD------HAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQAR--NAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAK 312          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: A0A7S3UM16_HETAK (Kinetochore protein NDC80 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UM16_HETAK)

HSP 1 Score: 148 bits (373), Expect = 5.090e-39
Identity = 95/227 (41.85%), Postives = 130/227 (57.27%), Query Frame = 0
Query:  132 KAHLHASLHRLMDYLITHGYDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMP--SGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVD-DQRTDLKNFVDYLEEAYCCFLEGDDEAHQAITTEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLRLALSD 355
            K H+ AS+ +L++YL   GYD P++ K L  P+GRDF NI  FLFRQ+DPN+ P  +G FE  V+   K  RYPF ISK++L+AVG+P TWP ++G+++W+V+ L YD     AE EQ   E +  L         G D DQ +D + F+DYL  AY  FL GDD+ + A+  E     D     A   L  L   NE L +  Q+L  + + LP+LE   R   SD
Sbjct:    1 KKHVAASVRQLVNYLSDRGYDHPISPKILQRPTGRDFQNIVTFLFRQVDPNWAPEAAGSFENAVIATFKTLRYPFAISKTALSAVGSPHTWPTLLGSLTWLVELLEYD-----AEVEQARAEADHHL---------GFDGDQASDDRAFMDYLGRAYTAFLMGDDDLYAALEGELVAGFDRGQGRAAADLAALRGRNEDLQRQLQQLEARRDRLPQLEARARDLRSD 213          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: A0A7S1TVG9_9STRA (Kinetochore protein NDC80 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVG9_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.870e-31
Identity = 62/126 (49.21%), Postives = 88/126 (69.84%), Query Frame = 0
Query:  121 GGRSDHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEE 246
            G RSD RP  D+  ++AS+  L++YL+ H Y Q ++ K L  P+ RDF+NI  FLFRQ+D N   SG+FE++V+   K   YPF+ISK+SL AVG+P TWP ++ +ISW+++ L YDE  A AE+E
Sbjct:   47 GRRSDPRPTTDRGFINASIRALINYLMDHEYGQALSPKILTRPTQRDFSNIVTFLFRQIDANLPRSGKFEDEVLTMYKALHYPFSISKTSLHAVGSPHTWPHLLASISWMIELLEYDEKGADAEDE 172          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: A0A7S1YCV6_9EUKA (Kinetochore protein NDC80 n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1YCV6_9EUKA)

HSP 1 Score: 134 bits (337), Expect = 6.820e-31
Identity = 96/268 (35.82%), Postives = 149/268 (55.60%), Query Frame = 0
Query:  122 GRSDHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFL-KMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAITTEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLRLALSDIEKITSLWEEIKTHERLLQEKVDKRAEEERRLK 388
            G+SD RPL DK    A + +L+ +L + GYD+P+++K+L SPS +DF +I  FLFRQ+DPN+ P+    ED VP + K   YP+ ISK SL AVG+   WP ++GA+SW+V+ + ++E  +   EEQ L  +EA         ++    Q ++ K F  Y+ +AY  FL G D     +  + S   D  +A   + + +LEE  E+LA          + L KL E      SD++K   L  +++ H   L++K +K AE E+ +K
Sbjct:   68 GKSDPRPLSDKHFQVAQIKQLISFLASTGYDKPVSEKQLHSPSSKDFMSIVTFLFRQIDPNFSPAPNKMEDEVPAMFKALGYPYNISKRSLYAVGSMHAWPNLLGALSWLVELIEFNEEASRLNEEQ-LAAQEAGEADPALTGDESTSSQLSE-KLFFSYISQAYSQFLAGSDN-FDVLDQQMSAQFDRRNASTLEAIHQLEEQKEALAADVAAANSGSDRLAKLVEAKGTLASDLKKFERLINDLQAH---LEQKKNKAAEREKDVK 329          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: I0YPD3_COCSC (Kinetochore protein NDC80 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPD3_COCSC)

HSP 1 Score: 134 bits (336), Expect = 9.190e-31
Identity = 93/291 (31.96%), Postives = 140/291 (48.11%), Query Frame = 0
Query:   91 GRPXXXXXXXSTAGERKSGGVRRGSSFGTGGGRSDHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAITTEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLRLALSDIEKITSLWEEIKTHERLLQEKVDKRA 381
            GRP         AG   +   R  +    GG + D R + DKA+    +  L+ YL THGYDQP+  K L +P G+D  NI  FL RQ+DP+    G+ E++V    K  +YP+TISKS+L AVG+P TWP ++ A+ W+ + L Y+E                     EQ +E   DD+     NF +Y+  AY  FL G+DE   A+    +               +L++ NE LA   + +    + L +     +  LSD +K   L + +++H+  LQ KV +R 
Sbjct:   44 GRPSMFPGNVRLAGPATAVPRRSSAHAKAGGPKHDPRRIGDKAYQANCIRTLIAYLSTHGYDQPLTPKMLANPMGKDVINIMHFLMRQVDPHCKNQGKIEDEVPALFKRLKYPYTISKSALFAVGSPHTWPGLLAALVWLTELLYYEEKA-------------------EQVREQTFDDKARSESNFFNYVSTAYRHFLSGNDEECAAVDDAQTRVFHDRAEATRTRNAELQQENERLAAEVEAMRSSPSPLEEARAKHQEHLSDRDKFRKLLDNLQSHKEGLQRKVAERT 315          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: D0N350_PHYIT (Kinetochore protein NDC80 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N350_PHYIT)

HSP 1 Score: 126 bits (316), Expect = 2.690e-30
Identity = 69/178 (38.76%), Postives = 106/178 (59.55%), Query Frame = 0
Query:  125 DHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLM---SPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAI 299
            D RP+ D+++ +  +  L+++L  H YDQ + + + +    PS +DF N+  FLF+ +DP +   G+FEEDVV  L+  RYP +ISK+SLAAVG P TWP ++ A+SW+++ L YDEAI  A E ++                DG +D+    K F  YL+ +Y  FL GDD+  +A+
Sbjct:   73 DPRPVSDRSYQYRCVQTLVEFLSEHMYDQVIPQAQALLRRGPSKKDFENMILFLFKLIDPTFEFKGKFEEDVVQQLRDLRYPISISKTSLAAVGTPHTWPMLLMAMSWLIELLSYDEAIQQASENEQ----------------DGENDEENGDKPFFKYLDASYHVFLAGDDDKFEAL 234          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: A0A8J5IUS5_9STRA (Kinetochore protein NDC80 n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IUS5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.600e-29
Identity = 111/349 (31.81%), Postives = 165/349 (47.28%), Query Frame = 0
Query:    5 RRTTLAAVSSASLNSRGSMGTASSAGRSSKQPSSRFSISTSSAGARSTMGGXXXXXXXXGGRPSMGTSXXXXXXXXXXXXXXXXXMGRPXXXXXXXSTAGERKSGGVRRGSSF-------GTGGGRSDHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLM-SPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAITTEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKL 345
            RRTTL  VSS+ LN+R S           + PSSR S+ + S  A                R S+G +                  GRP       ++   R+S G RR SS+       G G    D RP+ D++ L++ +  L+++L  H YDQ +        PS +DF N+  FLF+Q+DP +    +FEEDVV  L+  RYP +ISK+SLAAVG P TWP ++ A+SW+++ L YDEAI  A E ++                D  +D+    K F  YL+ +Y  FL G+DE + A+     E     +   +    +LE+  E L +  ++     N+L +L
Sbjct:    2 RRTTLGPVSSSQLNARPSA---------LRHPSSRVSVPSKSMAATE--------------RQSIGVASRRVTMAAGT-------TGRPPTGPR--ASMNPRQSVGNRRNSSYSSRASVQGRGARVVDPRPVHDRSFLNSCVQTLVEFLSDHMYDQVLPPALARRGPSKKDFTNMILFLFKQVDPTFEFGAKFEEDVVQQLRNLRYPISISKTSLAAVGTPHTWPMLLMAMSWLIELLSYDEAIQQANEAEQ----------------DDENDEENGDKPFFKYLDASYHIFLAGEDEKYDALERHEREKLIARNEAVKQETSELEQYREELKRRIEKAKRDKNALAEL 302          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: A0A3R7H3U0_9STRA (Kinetochore protein NDC80 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H3U0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 5.310e-29
Identity = 92/284 (32.39%), Postives = 146/284 (51.41%), Query Frame = 0
Query:  101 STAGERKSGGVRRGSSFGTGGGRS-DHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLM-SPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAITTEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLRLALSDIEKITSLWEEIKTHERLLQEKVDKRAE 382
            +  G R S    R S  G GG R  D RP+ DK++L++ +  L+++L    YDQ ++   L   PS +DF N+  FLF+Q+DP +    +FEEDVV   +  RYP  ISK+SLAAVG P TWP ++ +ISW+++ L YDEAI   E EQ                  G +++    K F  YL+ +Y  FL G+D+   A+ T+  E     +  A++   +LE   + L +  ++     ++L +L +       D EK   L  +++  +  L +K++   E
Sbjct:   58 TVTGRRSSTYSSRASVSGRGGSRILDPRPVSDKSYLNSCVQTLVEFLSDRLYDQTLSPGLLKRGPSKKDFCNMILFLFKQVDPTFEFGVKFEEDVVVQFRNLRYPVPISKTSLAAVGTPHTWPTLLLSISWLIELLSYDEAIQQNEMEQN-----------------GENEEENGDKQFFKYLDASYHVFLAGEDDKFSALETQEREKLIARNEIAKEETNELELQRDELRKRIEKAKQNKSALSQLSKKKMDCEGDYEKFKKLVSDLEKLQVKLHKKIESLGE 324          
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Match: A0A8B7ZTX5_ACAPL (Kinetochore protein NDC80 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZTX5_ACAPL)

HSP 1 Score: 129 bits (323), Expect = 5.820e-29
Identity = 84/256 (32.81%), Postives = 136/256 (53.12%), Query Frame = 0
Query:  125 DHRPLMDKAHLHASLHRLMDYLITHGYDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMTRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLREREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDD---EAHQAITTEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLRLALSDIEKITSLWEEIKTHERLLQEKV 377
            D RPL DK+++   +  ++++L  HGY  P+N K LM+P+ +DF  I  FL+  L+  Y P+ +FEE++    K  +YPF ISKSS+  VG+P TWP ++GA+ W+++S+ Y  A+ V E+        A L   + D+ D V    TD +   +Y+E AY  FL+G D   E  +A+     +   G+    E   G+ +  +  L    QE       L  L+E  ++  SD E+     +E+  H+R  Q+K+
Sbjct:   93 DTRPLSDKSYMQQEIRDIIEFLTQHGYPHPLNAKMLMTPTTKDFLKIFQFLYNFLEVKYAPAQKFEEEIPQIFKTLKYPFNISKSSMFTVGSPHTWPNILGALHWLLNSVKY--ALGVDEQSMLFS---AQLADDQGDEFDSV----TDSEVLFNYVEGAYKEFLDGADTFEERERALEQSIKQRSLGQTGNLEQLAGEEQRLSAELQLLQQEPC----RLTALQEHAQMMASDNERFHKYLQELTGHQRFQQQKL 335          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6185.14764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLF2_ECTSI7.960e-16478.48Kinetochore protein NDC80 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CEN5_9STRA5.010e-5342.21Kinetochore protein NDC80 n=1 Tax=Tribonema minus ... [more]
A0A7S3UM16_HETAK5.090e-3941.85Kinetochore protein NDC80 (Fragment) n=1 Tax=Heter... [more]
A0A7S1TVG9_9STRA3.870e-3149.21Kinetochore protein NDC80 (Fragment) n=1 Tax=Phaeo... [more]
A0A7S1YCV6_9EUKA6.820e-3135.82Kinetochore protein NDC80 n=1 Tax=Sexangularia sp.... [more]
I0YPD3_COCSC9.190e-3131.96Kinetochore protein NDC80 n=1 Tax=Coccomyxa subell... [more]
D0N350_PHYIT2.690e-3038.76Kinetochore protein NDC80 n=1 Tax=Phytophthora inf... [more]
A0A8J5IUS5_9STRA2.600e-2931.81Kinetochore protein NDC80 n=1 Tax=Phytophthora ale... [more]
A0A3R7H3U0_9STRA5.310e-2932.39Kinetochore protein NDC80 n=2 Tax=Phytophthora ker... [more]
A0A8B7ZTX5_ACAPL5.820e-2932.81Kinetochore protein NDC80 n=1 Tax=Acanthaster plan... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 366..386
NoneNo IPR availableCOILSCoilCoilcoord: 314..338
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..389
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
IPR005550Kinetochore protein Ndc80PFAMPF03801Ndc80_HECcoord: 123..241
e-value: 1.0E-36
score: 125.9
IPR005550Kinetochore protein Ndc80PANTHERPTHR10643KINETOCHORE PROTEIN NDC80coord: 4..383
IPR038273Ndc80 domain superfamilyGENE3D1.10.418.30coord: 120..236
e-value: 4.2E-35
score: 122.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6185contigL-elsbetiae_contig6185:4096..11357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6185.14764.1mRNA_L-elsbetiae_contig6185.14764.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6185 3905..11357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6185.14764.1 ID=prot_L-elsbetiae_contig6185.14764.1|Name=mRNA_L-elsbetiae_contig6185.14764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
MASRRRTTLAAVSSASLNSRGSMGTASSAGRSSKQPSSRFSISTSSAGAR
STMGGGGGGGGGAGGRPSMGTSRPSMGTSRPSMGTSRPSMGRPSMGRPSM
STAGERKSGGVRRGSSFGTGGGRSDHRPLMDKAHLHASLHRLMDYLITHG
YDQPMNKKKLMSPSGRDFNNITGFLFRQLDPNYMPSGRFEEDVVPFLKMT
RYPFTISKSSLAAVGAPQTWPKVMGAISWIVDSLLYDEAIAVAEEEQRLR
EREATLEQREQDKEDGVDDQRTDLKNFVDYLEEAYCCFLEGDDEAHQAIT
TEFSEARDGEDAGAEDFLGKLEESNESLAQTNQELLDQGNSLPKLEEDLR
LALSDIEKITSLWEEIKTHERLLQEKVDKRAEEERRLKV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005550Kinetochore_Ndc80
IPR038273Ndc80_sf