prot_L-elsbetiae_contig101.146.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig101.146.1
Unique Nameprot_L-elsbetiae_contig101.146.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length727
Homology
BLAST of mRNA_L-elsbetiae_contig101.146.1 vs. uniprot
Match: Q8QNM9_ESV1K (EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM9_ESV1K)

HSP 1 Score: 444 bits (1142), Expect = 1.750e-142
Identity = 379/730 (51.92%), Postives = 487/730 (66.71%), Query Frame = 0
Query:    6 KSVGYLVAAVLCIYALVYKIPLPCFGCQKEGFWYRCVMGTGEGTESCYAHEAARKRVETAGNIVSEAAVYMDNLWDFTKKELPEVIKDFIASLKTRILDLRDNVAKRIDGVISFLREKILLFVNKVKD-GINTVKDFIMGVVQPILGFFTENILKPASELLTMLIEFYNMVRKIVWDSVHAFANLPFVSYGAEVVDIFKSIPNAINSVKTFVVDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNINTLVNPINKVIIATQTLRNVDFWNMSPFTFIPSISSRAATFVAPT----------INLPEIPDARFGEVKFELDIPDIKFDGIDIPEXXXXXXXXXXXDDIADLVXXXXXXXXXXXXXXDDLDEDALDFPSIPGLGFVSDRISELRESIQNIFLNAMQPVLDAIATTIAFVSYIISSTKQFWEEYMTLTKLKERAKSLMHLVGDRVEALKALVRDEVIPGIINLILGMKEPILDFAQNIATHTWSFLKTIGTNVAGIFNEAFKVVVKVTGVIAKGTFHTGLYIVGTTVEKYTAIIPIPISVKMLLLFTTIIWMFFGGFVRNAKSIVNLGVGSVKGAAMAISDLDKVVDSFFGVSKRG---ASSF 721
            KSV Y+VA   C+YALVYKIP+PCFGCQK GFWYRCVM TG+GT SC AH+AA+ RVETAG I+ EA VYMDNLWDFTK ELP VI DFIA+LK ++L L+D +A++I+ +I+FLR+KI LF +K+K+  ++T + F+  V+ P++ FF  N+LKPA  +    +EF +++  ++ ++V  FAN+P   +  +VVD+F+ IP A++++K  +V +                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     + P+N  +   + +RNV          +P I  R  +++             + LP IP  +FG +K  L+IP+I F  IDIP             DI    XXXXXXXXXXXXXX        D PSIPG GF++D++ +++ESI+ IF  AM P+ D +AT IA V  IISS K F+  Y+T T +K R   LM L G+ V  LK L  +E++P  + LI GM +PIL F +    HTW F+K +G NV  IFN+++KV+ KVTGVIAKG FHTGLYI+GTTVE+YT  IP+P+SVK++L+  +IIWMFFGGF+ N K IV+L +  ++GAA+A++DLD  +D  FGV ++    ASSF
Sbjct:   19 KSVSYVVAGCFCVYALVYKIPIPCFGCQKNGFWYRCVMDTGDGTASCAAHKAAKSRVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFIATLKDQVLGLKDRMAEKINLIIAFLRDKIELFWSKIKNVAVSTYEKFMEVVINPVIKFFVANLLKPAIVVFEKNMEFRDLIWSVLSNAVDKFANIPIGDFVGDVVDVFQKIPEAMDNLKGLLVMLINKIKNDTIGVVNTGIRESIQGVETSVNFLSGKLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVIKGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVPVNATVGIMEKVRNVK---------VPVIKKRIFSWIKTPGKVRDINIDGVELPTIPVEKFGRIKEGLNIPNIPFKNIDIPALDIPTVNIKAPADIKXXXXXXXXXXXXXXXXXXXXXXXXFDLPSIPGFGFITDKVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLAGEGVSLLKDLFVNEIVPAFMKLIRGMADPILAFVKAATDHTWRFMKKLGANVGSIFNKSYKVITKVTGVIAKGVFHTGLYIIGTTVERYTGFIPLPLSVKLMLIMASIIWMFFGGFLSNGKVIVDLSLSVIQGAAVALTDLDHQLDLGFGVIEKATPAASSF 739          
BLAST of mRNA_L-elsbetiae_contig101.146.1 vs. uniprot
Match: D8LP69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP69_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 7.730e-139
Identity = 392/727 (53.92%), Postives = 501/727 (68.91%), Query Frame = 0
Query:    6 KSVGYLVAAVLCIYALVYKIPLPCFGCQKEGFWYRCVMGTGEGTESCYAHEAARKRVETAGNIVSEAAVYMDNLWDFTKKELPEVIKDFIASLKTRILDLRDNVAKRIDGVISFLREKILLFVNKVKD-GINTVKDFIMGVVQPILGFFTENILKPASELLTMLIEFYNMVRKIVWDSVHAFANLPFVSYGAEVVDIFKSIPNAINSVKTFVVDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNINTLVNPINKVIIATQTLRNVDFW--------NMSPFTFIPSISSRAATFVAPTINLPEIPDARFGEVKFELDIPDIKFDGIDIPEXXXXXXXXXXXDDIADLVXXXXXXXXXXXXXXDDLDEDALDFPSIPGLGFVSDRISELRESIQNIFLNAMQPVLDAIATTIAFVSYIISSTKQFWEEYMTLTKLKERAKSLMHLVGDRVEALKALVRDEVIPGIINLILGMKEPILDFAQNIATHTWSFLKTIGTNVAGIFNEAFKVVVKVTGVIAKGTFHTGLYIVGTTVEKYTAIIPIPISVKMLLLFTTIIWMFFGGFVRNAKSIVNLGVGSVKGAAMAISDLDKVVDSFFGVSKRGASSFLS 723
            K+V Y+VA   C+YALVYKIP+PCFGCQK+GFWYRCVM TG GT SC AH+AA+ RVETAG I+ EA VYMDNLWDFTK ELP VI DFIA+LK +IL L+D +A++I+ +++FLR+K+ LF +KVK   ++T + F+  V+ P++ FF  N+L+PA+ +   ++EF  +V  ++ +++  FAN+P  ++  +VVD+F+ +P A++ +K F+V +                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +  +N            N  P  +I S            + LP IP  +FG +K +L+IP+I FD IDIP             DI +  XXXXXXXXXXXXXX          P IPG GF+SDR+ +++ESI+ IF  AM P+ D +AT IA V  IISS K F+  Y+T T +K R   LM L G+ V  LK L  DE++P  + LI  M +PIL F +    HTW F+K +GTNV  IFNE+++V+ KVTGVIAKG FHTGLY+VGTT+E+YT  +P+PISVK+LL+  +IIWMF GGF+ N K++V+L +  ++G+A+A++DLD  +D  FGV ++   +  S
Sbjct:   19 KTVSYVVAGCFCVYALVYKIPIPCFGCQKDGFWYRCVMDTGHGTASCAAHKAAKNRVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFIATLKDQILGLKDRMAEKINLILTFLRDKMNLFWSKVKGVAVSTYERFMDVVINPVIKFFVANLLQPATVVFEKIMEFRELVWTVLSNAIDKFANIPIGNFVGDVVDVFQKLPEAMDDLKGFMVMLINKIKNETIGVVNTGIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNMNRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMKRAKNTHIGYNKGFVKINFRPLNWI-SAPGEVKKIDIDEVELPTIPVEKFGRIKEDLNIPNIPFDQIDIPALDIPTVNIKAPADIKEXXXXXXXXXXXXXXXXXXXXXXXXXLPPIPGFGFISDRVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLAGEGVSLLKDLFMDEIVPAFMKLIRAMADPILAFVKTATDHTWRFMKKLGTNVGSIFNESYRVIAKVTGVIAKGVFHTGLYVVGTTIERYTGWLPLPISVKLLLILASIIWMFLGGFLSNGKALVDLALSVMQGSAIALTDLDHQLDLRFGVIEKATPALSS 744          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNM9_ESV1K1.750e-14251.92EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP69_ECTSI7.730e-13953.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 653..675
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..652
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 676..726
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 657..679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig101contigL-elsbetiae_contig101:33905..36085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig101.146.1mRNA_L-elsbetiae_contig101.146.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig101 33905..36085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig101.146.1 ID=prot_L-elsbetiae_contig101.146.1|Name=mRNA_L-elsbetiae_contig101.146.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=727bp
MYPSDKSVGYLVAAVLCIYALVYKIPLPCFGCQKEGFWYRCVMGTGEGTE
SCYAHEAARKRVETAGNIVSEAAVYMDNLWDFTKKELPEVIKDFIASLKT
RILDLRDNVAKRIDGVISFLREKILLFVNKVKDGINTVKDFIMGVVQPIL
GFFTENILKPASELLTMLIEFYNMVRKIVWDSVHAFANLPFVSYGAEVVD
IFKSIPNAINSVKTFVVDMINSLKNNLIGVVNAGIRQSIEGIEHSINTLG
GGVEDGANLAVEGLNYVKQSLIQNLNSSINGLAGGIETAVNASSLGIETA
VNTSVNGVTGAINMSMNGIETSINGVIGATNDVIGHSEDSVNFLGGAVNS
IMGEVESKFNKIGTTIATNINTLVNPINKVIIATQTLRNVDFWNMSPFTF
IPSISSRAATFVAPTINLPEIPDARFGEVKFELDIPDIKFDGIDIPELDI
PEVDITEPDDIADLVIPDVSIPVVEIPIPDDLDEDALDFPSIPGLGFVSD
RISELRESIQNIFLNAMQPVLDAIATTIAFVSYIISSTKQFWEEYMTLTK
LKERAKSLMHLVGDRVEALKALVRDEVIPGIINLILGMKEPILDFAQNIA
THTWSFLKTIGTNVAGIFNEAFKVVVKVTGVIAKGTFHTGLYIVGTTVEK
YTAIIPIPISVKMLLLFTTIIWMFFGGFVRNAKSIVNLGVGSVKGAAMAI
SDLDKVVDSFFGVSKRGASSFLSNLI*
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