mRNA_L-elsbetiae_contig117.1474.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig117.1474.1
Unique NamemRNA_L-elsbetiae_contig117.1474.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: D7G231_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G231_ECTSI)

HSP 1 Score: 617 bits (1592), Expect = 1.090e-208
Identity = 344/568 (60.56%), Postives = 400/568 (70.42%), Query Frame = 2 
Query:  482 RPDEVGLEEMELWLDEAGVDRRGGGKGTPSAKLRRFPGRGIGLEAAVDLERDSTVASIPRRACLSSDAEDAPVGTLRAWAHALIASIPPSXXXXXXXXEEVGAFETDVAAVTLQVCLERIAGARSALAPWMALLDGKGDLNLPALWPASDLEALKGSLVLQEVEECLARAEAERNMVAAAIANALGGKVETGREAVAETSKLLGSLRLDAEGVEGRPTRREWLHARCTVQSRAYRVGQRYLLIPLVDFANHDDDVAYAVCPGDGVFTDSDEMVFVADRSYRPGQEICTSYGDMDNAKRLFSFGFVTL----SQPAQRPPSSAADTLPLPTEAFCDVSFDLASSDPLRSFKEGVLREHGERTGDGASPSSLSAMFPLTPRRPFVWQLVEGPARSFVEAAMPVLRLAALTPEEFAGDEAFRDSCQPRRGDLATTGVGSGLESGGVGLRVDAFPALAPGDGSRVMERLAGRFSLENEREALRLLKELCLSRLRAVRPTLRDVEALRETVRESSEGETFAASAPRSLLCATVRVGEAIAWHALLEVSISGTEGCACQHSGQTWASWVSESCE 2173
            R  +  L+E+ELWLDE GVDRRGGG G P+A+L    G+GIGL A+V+LERDSTVASIPRR C SSDA DAP GTLRAWAH L ASIP S        E+  +FE DVA VTLQV LE  AG RS  APWMA+L+ KG LNLPALWP SDLE LKG+LVLQ+VE CLARA++ER  VAAA+   L G++  G  A  E         LD   +EGRPT  EWLHARCTVQSRAYRV +RYLLIPLVDFANHDDDVA+AVCPGDGVFT SDE+VFVADR+YRPG+E+CT+YGDMDNAKRLFSFGFVTL    +QP+QR P  A + LPLPTEAFCDV   +A++D LR FKE VLRE   + G+     +L AMFPLTP   FV QLVEGPAR FVE+ +PV+RL ALTPEE  G +AF D+C  R      +  G+  +S       D  P LA G G +V+  L  R SL+NE++ALRLL E C +RL ++ PT  DVE LR    +S E +TFAA  PRSLLCATVRVGEAIAW+ALL+      EG       QTWASW  E CE
Sbjct:   63 RSSKSSLKEIELWLDEVGVDRRGGGCGPPAARLTSVSGKGIGLTASVELERDSTVASIPRRICFSSDAADAPAGTLRAWAHDLFASIPSSAAAACS--EKHLSFEGDVAVVTLQVFLESAAGERSTCAPWMAMLNRKGSLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVAAAMVKGLRGELGGGGRAGGEGGGFPECPWLDTSNMEGRPTFAEWLHARCTVQSRAYRVRRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGDMDNAKRLFSFGFVTLKQHAAQPSQRRP--AGNMLPLPTEAFCDVELTIAATDELRVFKEAVLRER--QAGEDLVSPNLGAMFPLTP---FVSQLVEGPARLFVESVLPVMRLVALTPEELTGGDAFGDACDTR------SVFGTSFDSRMTDTSSDKCPVLAAGTGRQVLAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNPTFGDVETLRAVADDSHESKTFAACGPRSLLCATVRVGEAIAWYALLKACAEKMEGGTGVREEQTWASWTLERCE 615
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: A0A6H5K108_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K108_9PHAE)

HSP 1 Score: 611 bits (1576), Expect = 2.770e-206
Identity = 349/596 (58.56%), Postives = 403/596 (67.62%), Query Frame = 2 
Query:  407 CPSAGANRADVRDAGKVRAGSD-----DPSRPDEVGLEEMELWLDEAGVDRRGGGKGTPSAKLRRFPGRGIGLEAAVDLERDSTVASIPRRACLSSDAEDAPVGTLRAWAHALIASIPPSXXXXXXXXEEVGAFETDVAAVTLQVCLERIAGARSALAPWMALLDGKGDLNLPALWPASDLEALKGSLVLQEVEECLARAEAERNMVAAAIANALGGKVETGREAVAETSKLLGSLRLDAEGVEGRPTRREWLHARCTVQSRAYRVGQRYLLIPLVDFANHDDDVAYAVCPGDGVFTDSDEMVFVADRSYRPGQEICTSYGDMDNAKRLFSFGFVTLSQPAQRPPSS--AADTLPLPTEAFCDVSFDLASSDPLRSFKEGVLREHGERTGDGASPSSLSAMFPLTPRRPFVWQLVEGPARSFVEAAMPVLRLAALTPEEFAGDEAFRDSCQPRRGDLATTGVGSGLESGGVGLRVDAFPALAPGDGSRVMERLAGRFSLENEREALRLLKELCLSRLRAVRPTLRDVEALRETVRESSEGETFAASAPRSLLCATVRVGEAIAWHALLEVSISGTEGCACQHSGQTWASWVSESCE 2173
            C SA   R    D   V A  +     +  R  +  L+EMELWLDE GVDRRGGG G P+A+L    G+GIGL AAV+LERDSTVASIPR+ C SSDA DAP GTLRAWAH L ASIP S        E+  +FE DVA VTLQV LER AGA S  APWMA+L+ KG LNLPALWP SDLE LKG+LVLQ+VE CLARA++ER  VA+A+   L G    G     E         LD   +EGRPT  EWLHARCTVQSRAYRVG+RYLLIPLVDFANHDDDVA+AVCPGDGVFT SDE+VFVADR+YRPG+E+CT+YGDMDNAKRLFSFGFVTL Q A +P       + L LPTEAFCDV   +A++D LR  KE V RE   R GD  S  SLSA+FPLTP   FV QLV+GPAR FVE+ +PVLRL ALTP+E  G EAF D+   R      + +G+  ES       D  P LA G G +V+  L  R SL+NE++ALRLL E C +RL ++  T  DVEAL     +S E + FAA  PRSLLCATVRVGEAIAW+ALL+      EGC      QTWASW+ E CE
Sbjct:   33 CQSASLAREGAIDCTNVAAAEETNGRCESPRSSKSSLKEMELWLDEIGVDRRGGGCGPPAARLTWVSGKGIGLTAAVELERDSTVASIPRKICFSSDAADAPAGTLRAWAHDLFASIPSSAAAACS--EKHLSFERDVAVVTLQVFLERAAGASSTCAPWMAMLNRKGHLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVASAMVTGLRGDFGAGGREGGEAGGFPECTWLDPSNMEGRPTFAEWLHARCTVQSRAYRVGRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGDMDNAKRLFSFGFVTLKQHAAQPFQRRLTGNMLALPTEAFCDVELTIAATDALRVVKETVFRER--RAGDDLSSPSLSAVFPLTP---FVSQLVDGPARLFVESVLPVLRLVALTPDELTGGEAFGDAFDTR------SALGTIFESMVTDTSSDRCPVLAAGKGRQVLAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNLTTSDVEALSAVADDSHESKAFAACGPRSLLCATVRVGEAIAWYALLKACDEKMEGCTGVREEQTWASWMLERCE 615
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: D7G230_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G230_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.890e-21
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 3 
Query:    3 VNVDEMQYDETDGGSFSYECRCGEAYVVTRGELREGFEVVDCTGCSLYIRVVGTPAEAERST 188
            VNVD+M +DE DGGSFS+ECRCGEAYVVTR EL EGFEV+DC GCSLYIRV+G  AE   +T
Sbjct:   86 VNVDDMHFDEADGGSFSHECRCGEAYVVTRDELNEGFEVLDCPGCSLYIRVLGKLAEPAAAT 147
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: W7TVF3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVF3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.740e-10
Identity = 72/224 (32.14%), Postives = 100/224 (44.64%), Query Frame = 2 
Query:  866 PWMALLDGKGDLNLPALWPASDLEALKGSLVLQEVEECLARAEAERNMVAAAIANA------------LGGKVETGREAVAETSKLLGSLRLDAEGVEGRPTRREWLHARCTVQSRAYRVGQR------------------YLLIPLVDFANHDDDVAYAVCPGDGVFTDSDEMVFVADRSY-RPGQEICTSYGDMDNAKRLFSFGFV-TLSQPAQR---PPSS 1432
            P++ +L  +  ++LP LW     E   G     E EE     E  R+ + A +A +            + G++E+ R+AV     L  S       +    T   W  AR    SR Y +  R                    L+PL+D ANHDD + YAV PGDGVFT  +E+  VADR Y   G    +SYG + +A + +SFGF+ TLS P      PPSS
Sbjct:  203 PYVRVLPSRNQMDLPFLWEEDGREG-GGE---DEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTS-----PTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSLPPSARSSPPSS 417
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: A0A4D9DE75_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE75_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.160e-10
Identity = 69/223 (30.94%), Postives = 101/223 (45.29%), Query Frame = 2 
Query:  866 PWMALLDGKGDLNLPALWPASDLEALKGSLVLQEVEECLARAEAERNMVA-----------AAIANALGGKVETGREAVAETSKLLGSLRLDAEGVEGRPTRREWLHARCTVQSRAYRVGQR------------------YLLIPLVDFANHDDDVAYAVCPGDGVFTDSDEMVFVADRSY-RPGQEICTSYGDMDNAKRLFSFGFV-TLSQPAQR---PPSS 1432
            P++ +L  +  ++LP LW     E   G    +  E+     ++  +++A            A+   + G++E+ R+AV     L  S  L +       T   W  AR    SR Y +  R                    L+PL+D ANHDD + YAV PGDGVFT  +E+  VADR Y   G    +SYG + +A + +SFGF+ TLS P      PPSS
Sbjct:  203 PYVRVLPSRNQMDLPFLWEEDGRE---GGGENEGEEDSSGPEDSHDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLANRTLSTSPTLLSC-----LTWENWSWARAIAMSRPYVLESRPSRSTEAAGRSDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTAREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSLPPSARSSPPSS 417
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: A0A7S1XLD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.680e-10
Identity = 62/204 (30.39%), Postives = 88/204 (43.14%), Query Frame = 2 
Query:  809 AVTLQVCLERIAGARSALAPWMALLDGKGDLNLPALWPASDLEALKGSLVLQEVEECLARAEAERNMVAAAIANALGGKVETGREAVAETSKLLGSLRLDAEGVEGRPTRREWLHARCTVQSRAYRVGQRYLLIPLVDFANHDDDVAYAVCPGDGVFTDSDEMVFVADRSYRPGQEICTSYGDMDNAKRLFSFGFVTLSQPAQR 1420
            A  L V L+R +G  S + PW+ LL       LP  WP   +EA+ G L                           G ++   R  +A    LL        G         ++HA   + SRAY +  + +LIPL+D ANH+DDV YAV   DGVFT +D +  V       G ++ +SYG   ++     FGF    +PA+R
Sbjct:   14 AAALAVELDRPSG-ESPIHPWLDLLPPAQ--QLPLCWPLDAIEAMLGHL-------------------------GAGKRLLRLRRELAYEYALLAPHLPTGLGEAA------YVHASAYLLSRAYSIDGKLVLIPLIDMANHNDDVPYAVEKSDGVFTPADSLNLVLAAPRERGAQVFSSYGAHCSSDLFQCFGFTR--RPARR 181
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: W2QBI8_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QBI8_PHYPN)

HSP 1 Score: 61.2 bits (147), Expect = 3.080e-7
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 3 
Query:    3 VNVDEMQYDET---DGGS----FSYECRCGEAYVVTRGELREGFEVVDCTGCSLYIRV 155
            V VD+MQ +     DGG     ++++CRCG+ Y +T GEL++G +VV CTGCSL+IRV
Sbjct:   94 VLVDDMQREVLPGEDGGEDEVIYTHQCRCGDLYEITEGELQDGVDVVPCTGCSLHIRV 151
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BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: A0A225W9C9_9STRA (Heat shock protein 40 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W9C9_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.520e-7
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 3 
Query:    3 VNVDEMQYDETDGGS-------FSYECRCGEAYVVTRGELREGFEVVDCTGCSLYIRVV 158
            V++DEMQ +   G         F+++CRCG+ Y +T+ EL++G +VV CTGCSL+IRV+
Sbjct:   95 VSLDEMQREVLQGEDGDEDEVIFTHQCRCGDMYEITKEELKDGVDVVPCTGCSLHIRVL 153
[Close]
BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: A0A836CL58_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL58_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.050e-7
Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 3 
Query:    3 VNVDEMQYDETDGGSFSYECRCGEAYVVTRGELREGFEVVDCTGCSLYIRVV 158
            VN  +MQ  E   G   + CRCGEAY VT+ ELREG  VV C+GCSL +RV+
Sbjct:   87 VNASDMQLCED--GVLMHPCRCGEAYEVTQDELREGLNVVPCSGCSLNVRVL 136
[Close]
BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Match: A0A7S4IAJ5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IAJ5_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 1.120e-6
Identity = 23/52 (44.23%), Postives = 38/52 (73.08%), Query Frame = 3 
Query:    3 VNVDEMQYDETDGGSFSYECRCGEAYVVTRGELREGFEVVDCTGCSLYIRVV 158
            V++D+M+YDE D  ++ + CRCGE + +T   L E  ++V+C+GCSL I+V+
Sbjct:   86 VDLDDMEYDE-DENTYYHPCRCGEGFTITESALEEDIDIVNCSGCSLLIKVL 136
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig117.1474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G231_ECTSI1.090e-20860.56SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K108_9PHAE2.770e-20658.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G230_ECTSI1.890e-2174.19Heat shock protein 40 like protein/ DnaJ domain co... [more]
W7TVF3_9STRA1.740e-1032.14Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DE75_9STRA3.160e-1030.94Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1XLD1_9STRA5.680e-1030.39Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W2QBI8_PHYPN3.080e-750.00Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A225W9C9_9STRA3.520e-745.76Heat shock protein 40 n=1 Tax=Phytophthora megakar... [more]
A0A836CL58_9STRA4.050e-755.77Heat shock protein 40 like protein/ DnaJ domain-co... [more]
A0A7S4IAJ5_9EUKA1.120e-644.23Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig117contigL-elsbetiae_contig117:14096..17872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score621.7
Seed ortholog evalue3.8e-175
Seed eggNOG ortholog2880.D7G231
Hectar predicted targeting categorysignal peptide
EggNOG OGs2D17T@1,2SH13@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionSET domain and Rubisco LSMT substrate-binding domain protein
Ec32 orthologEc-11_003630.1
Exons5
Model size2833
Cds size1923
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815372.1444771-UTR-L-elsbetiae_contig117:14095..147251622815372.1444771-UTR-L-elsbetiae_contig117:14095..14725Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig117 14096..14725 -
1691682866.510656-UTR-L-elsbetiae_contig117:14095..147251691682866.510656-UTR-L-elsbetiae_contig117:14095..14725Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig117 14096..14725 -
1622815372.199241-UTR-L-elsbetiae_contig117:17577..175981622815372.199241-UTR-L-elsbetiae_contig117:17577..17598Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig117 17578..17598 -
1691682866.5583487-UTR-L-elsbetiae_contig117:17577..175981691682866.5583487-UTR-L-elsbetiae_contig117:17577..17598Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig117 17578..17598 -
1622815372.212797-UTR-L-elsbetiae_contig117:17613..178721622815372.212797-UTR-L-elsbetiae_contig117:17613..17872Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig117 17614..17872 -
1691682866.5702024-UTR-L-elsbetiae_contig117:17613..178721691682866.5702024-UTR-L-elsbetiae_contig117:17613..17872Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig117 17614..17872 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815372.154155-CDS-L-elsbetiae_contig117:14725..156341622815372.154155-CDS-L-elsbetiae_contig117:14725..15634Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 14726..15634 -
1691682866.5201516-CDS-L-elsbetiae_contig117:14725..156341691682866.5201516-CDS-L-elsbetiae_contig117:14725..15634Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 14726..15634 -
1622815372.1631427-CDS-L-elsbetiae_contig117:15930..160271622815372.1631427-CDS-L-elsbetiae_contig117:15930..16027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 15931..16027 -
1691682866.528289-CDS-L-elsbetiae_contig117:15930..160271691682866.528289-CDS-L-elsbetiae_contig117:15930..16027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 15931..16027 -
1622815372.177356-CDS-L-elsbetiae_contig117:16420..169741622815372.177356-CDS-L-elsbetiae_contig117:16420..16974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 16421..16974 -
1691682866.5387943-CDS-L-elsbetiae_contig117:16420..169741691682866.5387943-CDS-L-elsbetiae_contig117:16420..16974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 16421..16974 -
1622815372.1880548-CDS-L-elsbetiae_contig117:17214..175771622815372.1880548-CDS-L-elsbetiae_contig117:17214..17577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 17215..17577 -
1691682866.5486186-CDS-L-elsbetiae_contig117:17214..175771691682866.5486186-CDS-L-elsbetiae_contig117:17214..17577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig117 17215..17577 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig117.1474.1prot_L-elsbetiae_contig117.1474.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig117 14726..17577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig117.1474.1

>prot_L-elsbetiae_contig117.1474.1 ID=prot_L-elsbetiae_contig117.1474.1|Name=mRNA_L-elsbetiae_contig117.1474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=641bp
MGSSYKTAVPVLLLALLVPSKAFTGCSGRARHYCGRRESFTRCPSAGANR
ADVRDAGKVRAGSDDPSRPDEVGLEEMELWLDEAGVDRRGGGKGTPSAKL
RRFPGRGIGLEAAVDLERDSTVASIPRRACLSSDAEDAPVGTLRAWAHAL
IASIPPSAAAAAAAAEEVGAFETDVAAVTLQVCLERIAGARSALAPWMAL
LDGKGDLNLPALWPASDLEALKGSLVLQEVEECLARAEAERNMVAAAIAN
ALGGKVETGREAVAETSKLLGSLRLDAEGVEGRPTRREWLHARCTVQSRA
YRVGQRYLLIPLVDFANHDDDVAYAVCPGDGVFTDSDEMVFVADRSYRPG
QEICTSYGDMDNAKRLFSFGFVTLSQPAQRPPSSAADTLPLPTEAFCDVS
FDLASSDPLRSFKEGVLREHGERTGDGASPSSLSAMFPLTPRRPFVWQLV
EGPARSFVEAAMPVLRLAALTPEEFAGDEAFRDSCQPRRGDLATTGVGSG
LESGGVGLRVDAFPALAPGDGSRVMERLAGRFSLENEREALRLLKELCLS
RLRAVRPTLRDVEALRETVRESSEGETFAASAPRSLLCATVRVGEAIAWH
ALLEVSISGTEGCACQHSGQTWASWVSESCEEIDRVESTE*
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mRNA from alignment at L-elsbetiae_contig117:14096..17872-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig117.1474.1 ID=mRNA_L-elsbetiae_contig117.1474.1|Name=mRNA_L-elsbetiae_contig117.1474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3777bp|location=Sequence derived from alignment at L-elsbetiae_contig117:14096..17872- (Laminarionema elsbetiae ELsaHSoW15)
AGGTGAACGTGGACGAAATGCAGTACGACGAGACAGACGGCGGCAGCTTT
TCGTACGAGTGCCGTTGCGGGGAGGCGTACGTGGTCACCCGGGGAGAACT
CCGCGAAGGCTTCGAAGTGGTAGACTGCACGGGGTGCAGCCTCTACATAC
GCGTAGTCGGGACGCCCGCAGAAGCGGAACGTTCTACTGCCGGTGACAGA
TAGCCCGCTTTTCGCGTCCACCAGGCAACGGCGGGGACTGGTGGTGGTTC
TGGTGGTAGGTAGGTAGCCTGGAGTGGGTGAGCGACGTCGCCATCATGGG
CTCTAGCTACAAGACTGCCGTGCCTGTGCTGCTTTTGGCGCTTTTAGTGC
CGTCGAAGGCGTTCACCGGCTGCTCCGGGCGCGCGCGGCACTACTGCGGT
CGGCGCGAGAGTTTCACGCGCTGCCCAAGCGCGGGAGCAAATCGAGCAGA
CGTTCGAGACGCCGGGAAGGTGCGCGCTGGCAGTGACGACCCCTCACGAC
CCGACGAAGTGGGGCTGGAAGAGATGGAGCTGTGGCTAGACGAGGCTGGG
GTTGATCGGCGTGGCGGCGGGAAAGGAACCCCGTCGGCTAAACTCAGGCG
TTTTCCCGGGAGAGGGATCGGGCTGGAAGCTGCTGTGGACCTCGAGCGTG
ATTCGACGGTGAGGCACAGAATGGCCCGCTTGTGGTACATACCACGATCT
AGGATCTTCTTCGGGTTCCCCCAGTGGCATGTGCGATGCCCATTTGTTTT
ATTTTTCTTTATATTCGCACTCGTCCCAAGCATGTTCTTTTTTTTGCTGC
CGATGGTGATCACTCTCCGGTGAGAAAAATATCGCTCACCGAGCACACCG
ACCTGACTCTGAAGGGAATCCCATCCTCCATTATTCCGCTTCCTTCAGGT
GGCAAGCATTCCGCGCCGTGCTTGCCTGTCGTCGGATGCCGAAGACGCGC
CGGTCGGAACGCTCCGTGCGTGGGCTCATGCTCTCATAGCCTCAATTCCA
CCGTCTGCTGCTGCTGCCGCTGCTGCCGCGGAGGAGGTTGGCGCGTTTGA
GACGGACGTGGCTGCGGTCACCCTGCAGGTCTGCCTCGAGCGCATCGCGG
GCGCACGATCTGCGCTCGCGCCGTGGATGGCGTTGCTGGACGGAAAGGGC
GACCTGAACTTGCCGGCCCTGTGGCCGGCAAGCGATCTTGAGGCCCTGAA
GGGGTCGCTGGTCCTGCAAGAGGTCGAGGAGTGCCTGGCCAGGGCCGAGG
CGGAGCGCAACATGGTGGCAGCCGCGATTGCGAATGCACTTGGAGGAAAG
GTTGAGACGGGACGAGAGGCGGTGGCCGAGACCAGCAAGCTCCTGGGATC
CCTGCGGTTGGATGCCGAAGGGGTCGAGGGAAGACCCACGCGCCGTGAAT
GGCTACACGCGCGTTGCACGGTGCAGTCCAGGGCGTACCGCGTAGGGCAA
AGGTAGGCCCTCCCAGCAACCCGATCAGAGCAGATCAGAATGAAACATCC
GATGCAGGCCATGGTCTTTGGATAATCGTCTCCTAAAGGTCGGAAAATGC
TTATTGACTTGGATTTGTATGGGTTAATTAAATTTGGCTCTGCGTGCAAC
TGTTGGAAACCATGGTTGGCAAGTGAGAGGAACCCAGATCGAACTGTTCC
TCAGCGCAGGTTACAGAAAATGCCAGTACGCACCCGCCGGGCTGCACTGC
TATATGGGGCTTGGATGCAGGGATTTCTGTCTTTTTTATATACGATGCCT
ATTTACATACGAAGCTGTTGCAATGCCGACCCGTTTTATTTTTATTTTTT
TTACTTCTCATCGCCCTCGTTTGCCGTCGTCTGTGTTGGCCCCAGGTATC
TACTCATACCGCTGGTCGACTTTGCGAATCATGACGACGATGTGGCCTAT
GCGGTGTGCCCTGGCGACGGCGTCTTCACCGACTCGGATGAGGTATAACT
GCGCTGCTGGTTGGCGGCGTCGTCGAGATTGAGCGTGTGATCCACCGCCG
CGTACTGGCAAGCGTCGCTCTGTGGGGTCGTGAAGAAAGCACAACACACT
CGTCCGAGAACCCAATCCCCGAAAAGATGTTGCATGATACTTAATCTGCA
TGATCGGCGTCTATCTCTCTCTCTCAATGCAATCAATAGAGCACAGTTGA
AACATCCACATATTTGCTTAGTCCCCCCATTGTGCTGCTACTTCGCTCCC
GTCCCATGTCTTCGCCCACTCACCCCCAACACACACAGATGGTGTTTGTT
GCAGACCGGAGCTACCGCCCAGGCCAAGAGATCTGCACCAGCTACGGCGA
CATGGACAACGCGAAGAGGTTGTTCTCGTTCGGCTTCGTCACCCTGAGCC
AGCCGGCCCAGCGCCCTCCATCCTCCGCCGCCGACACGCTCCCTCTTCCG
ACAGAAGCTTTCTGCGACGTTTCGTTCGACCTGGCCTCCTCGGACCCCTT
GCGCTCCTTTAAGGAGGGCGTTCTGCGCGAGCACGGCGAACGAACTGGGG
ACGGCGCGTCGCCATCGTCGCTGAGCGCTATGTTCCCTCTGACGCCGCGT
CGCCCGTTCGTTTGGCAGCTTGTGGAGGGTCCCGCACGATCTTTCGTGGA
GGCCGCGATGCCCGTCCTGCGCCTTGCTGCGCTGACCCCCGAAGAGTTTG
CCGGCGACGAGGCCTTCCGGGATTCGTGTCAGCCGCGTCGGGGGGATCTG
GCAACTACTGGTGTAGGTAGCGGCCTTGAAAGCGGCGGCGTTGGCCTTAG
AGTGGACGCGTTTCCTGCCCTGGCGCCCGGAGACGGGAGTCGTGTTATGG
AACGGTTGGCAGGCCGATTTTCGCTCGAAAACGAACGCGAGGCACTGCGT
CTTTTGAAGGAGCTCTGCCTGAGTCGTTTGCGGGCAGTCCGTCCGACTTT
GCGTGATGTAGAAGCTTTGAGAGAGACCGTCAGAGAGTCGAGCGAAGGCG
AAACGTTCGCAGCGTCTGCGCCTCGGTCCTTGCTCTGCGCAACGGTGCGA
GTTGGGGAAGCGATTGCCTGGCATGCTCTTCTAGAGGTAAGCATTAGCGG
GACAGAGGGCTGCGCATGCCAACATTCGGGGCAGACTTGGGCTTCGTGGG
TTTCTGAGAGTTGCGAAGAAATTGACAGGGTTGAAAGTACGGAGTAGGTC
CATTCAGAGCCAGTTTCGAAGGAAACTGCGTTTTTTGTTCGCGTTGGATA
ATATTTATTTTTATTTCTGGGTGCTCGTTTTTGTCCTACAGGCACGCTGC
ATGGGAAGCTCGTTGCGTCCCGCGCGCGTATGGGAGAGGGTTGATGTACG
ATTGAATCTTATGCACCTCTGAGAGGTTCGAAACGTGATTTGGTCGAATT
TTTCTGGCGGTCGGGTTCCACGAACACACGCTGTGCGAGGTTTGATGTTT
GTCAGGTTGCTTCATGTACAATAGGCCCTTGATACTGGCGAGATCCTTGG
GGGGTTCACCGGAATGCTCTGGGGGGAACTTGTCCATCGAGGGGTATGTG
TGGGCTTACAGATTCCCCGGAAGAGCATGTTTCTCTTCCCACCGGCTCTT
TACCACCGCCCTTTGATTCTGCAACCGGCATCCAAACAACGTTTCCGGAG
ACAGACTGAAACCGGTACATAGATGAGGTAAGTAGACTGTCCCTTCCTGT
TGTAAATCGCCTGGGGTATAGCCCCAGCCTCGACTGAGTACCCTTCCCCC
CCTTTGATTTAGTACAAGGAATAAACAGGGTGTGAACGAGGCAAGACGAG
GAGGAAATAAGCAAGAGGGAAGAGAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig117:14096..17872-

>mRNA_L-elsbetiae_contig117.1474.1 ID=mRNA_L-elsbetiae_contig117.1474.1|Name=mRNA_L-elsbetiae_contig117.1474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3846bp|location=Sequence derived from alignment at L-elsbetiae_contig117:14096..17872- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCTCTAGCTACAAGACTGCCGTGCCTGTGCTGCTTTTGGCGCTTTT
AGTGCCGTCGAAGGCGTTCACCGGCTGCTCCGGGCGCGCGCGGCACTACT
GCGGTCGGCGCGAGAGTTTCACGCGCTGCCCAAGCGCGGGAGCAAATCGA
GCAGACGTTCGAGACGCCGGGAAGGTGCGCGCTGGCAGTGACGACCCCTC
ACGACCCGACGAAGTGGGGCTGGAAGAGATGGAGCTGTGGCTAGACGAGG
CTGGGGTTGATCGGCGTGGCGGCGGGAAAGGAACCCCGTCGGCTAAACTC
AGGCGTTTTCCCGGGAGAGGGATCGGGCTGGAAGCTGCTGTGGACCTCGA
GCGTGATTCGACGATGGGCTCTAGCTACAAGACTGCCGTGCCTGTGCTGC
TTTTGGCGCTTTTAGTGCCGTCGAAGGCGTTCACCGGCTGCTCCGGGCGC
GCGCGGCACTACTGCGGTCGGCGCGAGAGTTTCACGCGCTGCCCAAGCGC
GGGAGCAAATCGAGCAGACGTTCGAGACGCCGGGAAGGTGCGCGCTGGCA
GTGACGACCCCTCACGACCCGACGAAGTGGGGCTGGAAGAGATGGAGCTG
TGGCTAGACGAGGCTGGGGTTGATCGGCGTGGCGGCGGGAAAGGAACCCC
GTCGGCTAAACTCAGGCGTTTTCCCGGGAGAGGGATCGGGCTGGAAGCTG
CTGTGGACCTCGAGCGTGATTCGACGGTGGCAAGCATTCCGCGCCGTGCT
TGCCTGTCGTCGGATGCCGAAGACGCGCCGGTCGGAACGCTCCGTGCGTG
GGCTCATGCTCTCATAGCCTCAATTCCACCGTCTGCTGCTGCTGCCGCTG
CTGCCGCGGAGGAGGTTGGCGCGTTTGAGACGGACGTGGCTGCGGTCACC
CTGCAGGTCTGCCTCGAGCGCATCGCGGGCGCACGATCTGCGCTCGCGCC
GTGGATGGCGTTGCTGGACGGAAAGGGCGACCTGAACTTGCCGGCCCTGT
GGCCGGCAAGCGATCTTGAGGCCCTGAAGGGGTCGCTGGTCCTGCAAGAG
GTCGAGGAGTGCCTGGCCAGGGCCGAGGCGGAGCGCAACATGGTGGCAGC
CGCGATTGCGAATGCACTTGGAGGAAAGGTTGAGACGGGACGAGAGGCGG
TGGCCGAGACCAGCAAGCTCCTGGGATCCCTGCGGTTGGATGCCGAAGGG
GTCGAGGGAAGACCCACGCGCCGTGAATGGCTACACGCGCGTTGCACGGT
GCAGTCCAGGGCGTACCGCGTAGGGCAAAGGTGGCAAGCATTCCGCGCCG
TGCTTGCCTGTCGTCGGATGCCGAAGACGCGCCGGTCGGAACGCTCCGTG
CGTGGGCTCATGCTCTCATAGCCTCAATTCCACCGTCTGCTGCTGCTGCC
GCTGCTGCCGCGGAGGAGGTTGGCGCGTTTGAGACGGACGTGGCTGCGGT
CACCCTGCAGGTCTGCCTCGAGCGCATCGCGGGCGCACGATCTGCGCTCG
CGCCGTGGATGGCGTTGCTGGACGGAAAGGGCGACCTGAACTTGCCGGCC
CTGTGGCCGGCAAGCGATCTTGAGGCCCTGAAGGGGTCGCTGGTCCTGCA
AGAGGTCGAGGAGTGCCTGGCCAGGGCCGAGGCGGAGCGCAACATGGTGG
CAGCCGCGATTGCGAATGCACTTGGAGGAAAGGTTGAGACGGGACGAGAG
GCGGTGGCCGAGACCAGCAAGCTCCTGGGATCCCTGCGGTTGGATGCCGA
AGGGGTCGAGGGAAGACCCACGCGCCGTGAATGGCTACACGCGCGTTGCA
CGGTGCAGTCCAGGGCGTACCGCGTAGGGCAAAGGTATCTACTCATACCG
CTGGTCGACTTTGCGAATCATGACGACGATGTGGCCTATGCGGTGTGCCC
TGGCGACGGCGTCTTCACCGACTCGGATGAGGTATCTACTCATACCGCTG
GTCGACTTTGCGAATCATGACGACGATGTGGCCTATGCGGTGTGCCCTGG
CGACGGCGTCTTCACCGACTCGGATGAGATGGTGTTTGTTGCAGACCGGA
GCTACCGCCCAGGCCAAGAGATCTGCACCAGCTACGGCGACATGGACAAC
GCGAAGAGGTTGTTCTCGTTCGGCTTCGTCACCCTGAGCCAGCCGGCCCA
GCGCCCTCCATCCTCCGCCGCCGACACGCTCCCTCTTCCGACAGAAGCTT
TCTGCGACGTTTCGTTCGACCTGGCCTCCTCGGACCCCTTGCGCTCCTTT
AAGGAGGGCGTTCTGCGCGAGCACGGCGAACGAACTGGGGACGGCGCGTC
GCCATCGTCGCTGAGCGCTATGTTCCCTCTGACGCCGCGTCGCCCGTTCG
TTTGGCAGCTTGTGGAGGGTCCCGCACGATCTTTCGTGGAGGCCGCGATG
CCCGTCCTGCGCCTTGCTGCGCTGACCCCCGAAGAGTTTGCCGGCGACGA
GGCCTTCCGGGATTCGTGTCAGCCGCGTCGGGGGGATCTGGCAACTACTG
GTGTAGGTAGCGGCCTTGAAAGCGGCGGCGTTGGCCTTAGAGTGGACGCG
TTTCCTGCCCTGGCGCCCGGAGACGGGAGTCGTGTTATGGAACGGTTGGC
AGGCCGATTTTCGCTCGAAAACGAACGCGAGGCACTGCGTCTTTTGAAGG
AGCTCTGCCTGAGTCGTTTGCGGGCAGTCCGTCCGACTTTGCGTGATGTA
GAAGCTTTGAGAGAGACCGTCAGAGAGTCGAGCGAAGGCGAAACGTTCGC
AGCGTCTGCGCCTCGGTCCTTGCTCTGCGCAACGGTGCGAGTTGGGGAAG
CGATTGCCTGGCATGCTCTTCTAGAGGTAAGCATTAGCGGGACAGAGGGC
TGCGCATGCCAACATTCGGGGCAGACTTGGGCTTCGTGGGTTTCTGAGAG
TTGCGAAGAAATTGACAGGGTTGAAAGTACGGAGTAGATGGTGTTTGTTG
CAGACCGGAGCTACCGCCCAGGCCAAGAGATCTGCACCAGCTACGGCGAC
ATGGACAACGCGAAGAGGTTGTTCTCGTTCGGCTTCGTCACCCTGAGCCA
GCCGGCCCAGCGCCCTCCATCCTCCGCCGCCGACACGCTCCCTCTTCCGA
CAGAAGCTTTCTGCGACGTTTCGTTCGACCTGGCCTCCTCGGACCCCTTG
CGCTCCTTTAAGGAGGGCGTTCTGCGCGAGCACGGCGAACGAACTGGGGA
CGGCGCGTCGCCATCGTCGCTGAGCGCTATGTTCCCTCTGACGCCGCGTC
GCCCGTTCGTTTGGCAGCTTGTGGAGGGTCCCGCACGATCTTTCGTGGAG
GCCGCGATGCCCGTCCTGCGCCTTGCTGCGCTGACCCCCGAAGAGTTTGC
CGGCGACGAGGCCTTCCGGGATTCGTGTCAGCCGCGTCGGGGGGATCTGG
CAACTACTGGTGTAGGTAGCGGCCTTGAAAGCGGCGGCGTTGGCCTTAGA
GTGGACGCGTTTCCTGCCCTGGCGCCCGGAGACGGGAGTCGTGTTATGGA
ACGGTTGGCAGGCCGATTTTCGCTCGAAAACGAACGCGAGGCACTGCGTC
TTTTGAAGGAGCTCTGCCTGAGTCGTTTGCGGGCAGTCCGTCCGACTTTG
CGTGATGTAGAAGCTTTGAGAGAGACCGTCAGAGAGTCGAGCGAAGGCGA
AACGTTCGCAGCGTCTGCGCCTCGGTCCTTGCTCTGCGCAACGGTGCGAG
TTGGGGAAGCGATTGCCTGGCATGCTCTTCTAGAGGTAAGCATTAGCGGG
ACAGAGGGCTGCGCATGCCAACATTCGGGGCAGACTTGGGCTTCGTGGGT
TTCTGAGAGTTGCGAAGAAATTGACAGGGTTGAAAGTACGGAGTAG
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