mRNA_L-elsbetiae_contig6134.14699.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A6H5JTH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH4_9PHAE) HSP 1 Score: 330 bits (845), Expect = 3.330e-108 Identity = 157/204 (76.96%), Postives = 173/204 (84.80%), Query Frame = 1 Query: 1 RQHRSAMLAKGFGADK--DKPAAKGGRRKKAIK-SNKTPAASAPCPCFSGNPYGECCKPFHDGEKGAQPVQVMRARYAAYACNMPQFIMKSTHPEHDDFGKPGWRDDILVFCNNYKFTGLEVGKPEIDEDAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLYKAPDANYKESVNVISKRKYNATAKTDKPSGFSDR 603 RQ +LAKGFG DK KPA K + K K KTPAASAPCPCFSGNPYG+CCKPFHDGEK AQPVQVMRARYAAYACNMPQFIMK+THP+H+DFGKPGWRD ILVFCNNYKFTGLEVG+PE D+D P K +VYFTAMMA A+ GAVSFDERS+F+L +G+WLY+APDANYKESVNVISKRKYNA AKTD+PSGFS R Sbjct: 54 RQQGPILLAKGFGDDKGRSKPATKRNKDNKMAKIKTKTPAASAPCPCFSGNPYGDCCKPFHDGEKSAQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFGKPGWRDSILVFCNNYKFTGLEVGQPEEDQDTPDKVYVYFTAMMAGAKVGGAVSFDERSVFVLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSGFSAR 257
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: D8LLE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE1_ECTSI) HSP 1 Score: 321 bits (822), Expect = 5.750e-106 Identity = 143/172 (83.14%), Postives = 158/172 (91.86%), Query Frame = 1 Query: 88 IKSNKTPAASAPCPCFSGNPYGECCKPFHDGEKGAQPVQVMRARYAAYACNMPQFIMKSTHPEHDDFGKPGWRDDILVFCNNYKFTGLEVGKPEIDEDAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLYKAPDANYKESVNVISKRKYNATAKTDKPSGFSDR 603 IK+NKTPAASAPCPCFSGNPYG+CCKPFHDGEK QPVQVMRARYAAYACNMPQFIMK+THP+H+DF K GWRD ILVFCNNYKFTGLEVG+PE+D+D P K +VYFTAMMA A+G GAVSFDERS+FLL +G+WLY+APDANYKESVNVISKRKYNA AKTD+PSGFS R Sbjct: 4 IKTNKTPAASAPCPCFSGNPYGDCCKPFHDGEKSPQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFAKSGWRDSILVFCNNYKFTGLEVGQPEVDQDTPDKVYVYFTAMMAGAKGGGAVSFDERSVFLLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSGFSAR 175
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A835ZDT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT4_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.940e-29 Identity = 71/182 (39.01%), Postives = 102/182 (56.04%), Query Frame = 1 Query: 19 MLAKGFGADKD--KPAAKGGRRKKAIKSNKTPAASAPCPCFSGNPYGECCKPFHDGEKGA-QPVQVMRARYAAYACNMPQFIMKSTHPEHDDF-------GKPGWRDDILVFCNNYKFTGLEVGKPEIDEDAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLYKAPDANYKESV 534 M KGFGA + KP R K K AS C C SG Y +CC+ +HDG + A PV ++R+RY+AYA +P +IM +THP+H+D+ G W+ +L FC+ Y F GL+ G E+++D AF+ FTA + + + F ERS FL G+G+WLY + DA++ V Sbjct: 1 MATKGFGAPQQPKKP------RDKVPKD-----ASTACVCGSGKAYQDCCRHYHDGTRFAPDPVALLRSRYSAYAYRLPDYIMATTHPDHEDYKPAKDKAGAKAWQQSLLNFCDAYTFQGLQPGALELEDDGA-VAFLNFTAKVNALS--QRLQFVERSKFLCGGDGRWLYVSGDADFTPEV 168
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A2H0VN27_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 TaxID=1973935 RepID=A0A2H0VN27_9BACT) HSP 1 Score: 105 bits (261), Expect = 2.870e-23 Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 124 CPCFSGNPYGECCKPFHDGEKGAQPVQVMRARYAAYACNMPQFIMKSTHPE--HDDFGKPGWRDDILVFCNNYKFTGLEVGKPEIDEDAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLYK 504 CPC SGN Y +CC+PFH G+ P ++RARYAAYA N+P FI+ +THPE + + K W+ D+ F + F L + DE+ F+ F A + QGD +F ERS F+ EG+WLY+ Sbjct: 3 CPCHSGNDYKDCCEPFHKGKLPPTPTILLRARYAAYALNLPDFIIDTTHPECFYYEKDKDKWKKDLEEFSTSTIFKDLRILDTHEDEEL---GFITFVAFIK--QGDEDATFTERSYFVRE-EGKWLYR 125
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A6M1Z103_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1Z103_9BACT) HSP 1 Score: 100 bits (248), Expect = 1.420e-21 Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = 1 Query: 124 CPCFSGNPYGECCKPFHDGEKGAQPV-QVMRARYAAYACNMPQFIMKSTHPEHDDF--GKPGWRDDILVFCNNYKFTGLEVGKPEIDEDAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLYKA 507 CPC SG Y CC P H E+ + Q+MR+RY+AYA +P++IM +THPE+ + + W+ +IL FC FTGL++ E +D +AFV F A + D VSF E+S FL +G+WLY++ Sbjct: 3 CPCHSGKSYQACCVPLHRKERLPESAEQLMRSRYSAYALQLPEYIMDTTHPENPTYLEDRSPWQIEILKFCKETTFTGLDILSTENRDD---EAFVTFFAHLIQNNLD--VSFQEKSRFLKE-DGRWLYRS 127
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A7S0HEU9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEU9_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 6.970e-19 Identity = 52/165 (31.52%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 46 KDKPAAKGGRRKKAIKSNKTPAASAPCPCFSGNPYGECCKPFHDGEKGAQPVQVMRARYAAYACNMPQFIMKSTHPEHDDF--GKPGWRDDILVFCNNYKFTGLEVGKPEI-DEDAPGKAFVYFTAMMASAQGDGAVSFD---ERSIFLLNGEGQWLYKAPDANY 522 K P+ KG + + ++ PA C C S Y CC+P H+ +P+ ++RARY AYA +P F++ +T P+H+++ + W+ D+L FC+ + GLEVG+ + D A G A A GA+ E S + G WLY D Y Sbjct: 96 KSAPSGKGFGGAQTARFDRRPAKGVACACGSAQSYEACCQPCHEAGLATEPLALIRARYTAYAYRLPDFLIDTTSPDHEEWETDRTAWKKDLLTFCDTFVCEGLEVGQQQAGDAAAVGGADAVQVPFRAKLVQKGAIKMLDLLETSTLVRGAAGGWLYAKGDVEY 260
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A7V4V0Y6_9PROT (Zinc chelation protein SecC n=1 Tax=Campylobacterales bacterium TaxID=2268180 RepID=A0A7V4V0Y6_9PROT) HSP 1 Score: 91.3 bits (225), Expect = 1.960e-18 Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 124 CPCFSGNPYGECCKPFHDGEKGAQPVQVMRARYAAYACNMPQFIMKSTHPEHDDF--GKPGWRDDILVFCNNYKFTGLEVGKPEIDE-DAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLY 501 CPC SG Y +CCKP+H G K + +M++RY+AY +I+K+TH ++ DF K W+ +I+ FC N F GL++ +D D +AFV F A ++S + E+S F L +G WLY Sbjct: 5 CPCGSGVKYKKCCKPYHSGAKAPNALVLMKSRYSAYVVGDSNYIIKTTHKDNYDFRNDKKIWKSEIIGFCQNTDFYGLDI----LDFIDGADEAFVIFKASLSSG------NMIEKSRF-LRVDGSWLY 122
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A151CDG1_9PROT (Uncharacterized protein n=1 Tax=Sulfurovum riftiae TaxID=1630136 RepID=A0A151CDG1_9PROT) HSP 1 Score: 90.1 bits (222), Expect = 7.020e-18 Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 115 SAPCPCFSGNPYGECCKPFHDGEKGAQPVQVMRARYAAYACNMPQFIMKSTHPEHDDFGKP--GWRDDILVFCNNYKFTGLEVGKPEIDEDAPGK-AFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLY 501 +APCPC SG Y +CC +H G + +M++RYAAYA ++P +I+K+THP++ DF WR+ I +F +F L++ ID G+ A+V F A ++S + E+S F L G+WLY Sbjct: 7 NAPCPCGSGKKYKKCCLVYHKGALAPDALALMKSRYAAYAADLPDYIIKTTHPDNPDFTADVQTWRESIRLFTQQTEFLHLKI----IDFRENGEEAYVAFAATLSSGE------LKEKSRF-LKVSGKWLY 127
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A7V9UIY6_9BACT (Uncharacterized protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UIY6_9BACT) HSP 1 Score: 89.4 bits (220), Expect = 1.100e-17 Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 124 CPCFSGNPYGECCKPFHDGEKGAQPVQVMRARYAAYACNMPQFIMKSTHPEHDD--FGKPGWRDDILVFCNNYKFTGLEVGKPEIDEDAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLYK 504 CPC S Y ECC+ HDG + +MR+RY+AYA ++P++IM++THP+H D K W+ IL F +F L++ +D +AFV F A ++ Q + E+S FL G QWLY+ Sbjct: 5 CPCCSKKIYQECCQLMHDGAFPENALALMRSRYSAYALSLPEYIMRTTHPDHGDRLLNKEEWKMKILDFSRTTQFHRLDIVN---FQDGADEAFVTFIAHLS--QEKQPMQLHEKSRFLKIGS-QWLYR 127
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Match: A0A7Y5NW54_9DELT (Uncharacterized protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NW54_9DELT) HSP 1 Score: 87.0 bits (214), Expect = 9.260e-17 Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 100 KTPAASAPCPCFSGNPYGECCKPFHDGEKGA-QPVQVMRARYAAYACNMPQFIMKSTHPEHDD---FGKPGWRDDILVFCNNYKFTGLEVGKPEIDEDAPGKAFVYFTAMMASAQGDGAVSFDERSIFLLNGEGQWLY 501 + P ++ CPC SG PYGECC+P+H + A P +MR+RY+A+A +++ + HPEH + + R + C ++++TGL + + +D D + V F A + D +SF ERS F G G W Y Sbjct: 5 RAPKRTSACPCQSGKPYGECCRPYHRRTQEAPDPEALMRSRYSAFAIGEIDYLVATLHPEHAEKKNLPEEMLRSSLRAACRDHRYTGLTILETSVDGD---RGMVRFVAKVFQRGKD--ISFSERSTFERVG-GAWRY 136 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6134.14699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6134.14699.1 >prot_L-elsbetiae_contig6134.14699.1 ID=prot_L-elsbetiae_contig6134.14699.1|Name=mRNA_L-elsbetiae_contig6134.14699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp MLAKGFGADKDKPAAKGGRRKKAIKSNKTPAASAPCPCFSGNPYGECCKPback to top mRNA from alignment at L-elsbetiae_contig6134:534..4788+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6134.14699.1 ID=mRNA_L-elsbetiae_contig6134.14699.1|Name=mRNA_L-elsbetiae_contig6134.14699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4255bp|location=Sequence derived from alignment at L-elsbetiae_contig6134:534..4788+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6134:534..4788+ >mRNA_L-elsbetiae_contig6134.14699.1 ID=mRNA_L-elsbetiae_contig6134.14699.1|Name=mRNA_L-elsbetiae_contig6134.14699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig6134:534..4788+ (Laminarionema elsbetiae ELsaHSoW15)back to top |