mRNA_L-elsbetiae_contig6104.14653.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6104.14653.1
Unique NamemRNA_L-elsbetiae_contig6104.14653.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: A0A6H5J9B2_9PHAE (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B2_9PHAE)

HSP 1 Score: 603 bits (1554), Expect = 6.010e-204
Identity = 371/645 (57.52%), Postives = 407/645 (63.10%), Query Frame = 1
Query:    1 MKLDALLVSAAFLVGTAESYAPFSAARCSFNRQRSGRDHDTGAVRGRKRPRAHSTQMDSSNTRGSPAAPEDHVMLPPPAPTGLPPRLQAAVEMLDRDTDLKSKSKLLVELGDAFARTDAAVLPAPPTGDDSNIEASGVAADGWISQRVPGCVSEVYVALRVDKSPQSASPASRRKAAAVDNSLGTGGDGGVVSIRGTADSRLSRGLLALLALGLQGESPRAVLSLRGKHLATAVGMRAGLTDSRINGLGNLLRVIQDQVREHFRHAAAGAAAXXXXXXXXXXXXXXSGAPRAGDAVPPVPADLDDFHGKVPPRGTINSSSINGVVARTGPRLETAVAAKPPPPRPVASAGTPRATAAAPVFVDLSSTSTGTSP------------------------AGLDPNRSWGDDASSWYPLPGAENEVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSG----------DCSSDVAEIGTAEE-TNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            MK+DALLVSAA L GTAE + P  +      +  +         R RKRPR     MDS     S A+  D  ++P     GLPPRLQAAV+ML +DTDLK+KSKLLVELGDAFA TDAAVLP     D + +  +   ADGW + +VPGCVSEVYVA+RV++SP                         VVSIRGTAD+RLSRGLLALLALGLQG+S R VLSLRGK LA AVGMRAGLT SRINGLGN+L VIQDQVR HFR AAA    XX                 A D + P   DL    G  P R   N+  +                                                                            AGLDP+RSWGDDASSWYPLPGAENEVAMLLSGGVDSSVA+RLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYA AVCEQAGVPLEVVPLQ+EYWDQVVSYTV EAR GRTPNPDVMCNSRIKFGMFYDHVG+HFRHVATGHYARLE SG          D ++  A  GT E     + G  + +VRLLLSPDAVKDQTYFLCALTQDQLRKALFPLG YTKD+IRELAESYDLPTK+RKDSQ
Sbjct:    1 MKIDALLVSAALLAGTAECFTPHPSPLPKRFQNHAATRAALPPTRSRKRPRT--AWMDSDGA-ASAASVTDGRLVPXXXXXGLPPRLQAAVDMLGQDTDLKTKSKLLVELGDAFANTDAAVLPVVVPSDSTAVNEAS--ADGWHAHKVPGCVSEVYVAVRVEESPXXXXXXXXXXXXXXXXXXXXXXXXXVVSIRGTADARLSRGLLALLALGLQGQSARTVLSLRGKDLAAAVGMRAGLTSSRINGLGNVLGVIQDQVRGHFRRAAAAXXXXXG----------------AADTLRPTLVDLTAVQGATP-RAATNAGKVEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGLDPSRSWGDDASSWYPLPGAENEVAMLLSGGVDSSVAMRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSVDNNATPNDRNAAAAAAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQ 623          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: D8LCG7_ECTSI (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG7_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 1.230e-109
Identity = 178/225 (79.11%), Postives = 189/225 (84.00%), Query Frame = 1
Query: 1201 MLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNG---------------SGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            MLLSGGVDSSVA+RLL DQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYA AVCEQAGVPLEVVPLQ+EYWDQVVSYTV EAR GRTPNPDVMCNSRIKFGMFYDHVG+HFRHVATGHYARLE SG   SD A    ++ +                 + G  + +VRLLLSPDAVKDQTYFLCALTQDQLRKALFPLG YTKD+IRELAESYDLPTK+RKDSQ
Sbjct:    1 MLLSGGVDSSVAMRLLLDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSG--GSDDANATPSDRSAXXXXXXXXTEEPPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQ 223          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: W7TJQ7_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJQ7_9STRA)

HSP 1 Score: 301 bits (771), Expect = 8.060e-89
Identity = 187/436 (42.89%), Postives = 234/436 (53.67%), Query Frame = 1
Query:  562 DGGVVSIRGTADSRLSRGLLALLALGLQGESPRAVLSLRGKHLATAVGMRAGLTDS---RINGLGNLLRVIQDQVREHFRHAAAGAAAXXXXXXXXXXXXXXSGAPRAGDAVPPVPADLDDFHGKVPPRGTINSSSINGVVARTGPRLETAVAAKPPPPRPVASAGTPRATAAAPVFVDLSSTSTGTSPAGLDPNRSWGDDASSWYPLPGA---------ENEVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAG-VPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            DG  V + G +D+RLS GL+AL+A GL GESP  +LSL    L  A+G+  G+      R NGL N+++ +QD+V      +                                    + DF G+   R  I ++     +  T    E AV                                    P  +DP+ +    A S +P P             EVA+LLSGGVDSSVAL LLQ QGYK  AFYLKIWLEDELAHLN+CPWEED ++A AVC QAG VPLE +PLQKEYW QVV++T+ EA+ GRTPNPD++CNS +KFG+FYD +GR +  VATGHYAR          V   G  E        G+  VRL+ SPD +KDQTYFL  LTQ+QL +A FP+GGY K +IR +AE  DLPTK RKDSQ
Sbjct:  206 DGSAVHVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESR-----------------------------------VPDFQGERGAREAILAAPAERPMLTTAGTKEFAV------------------------------------PVAVDPSHAAPTPAIS-FPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARA---------VPAAGGKE--------GEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQ 552          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: A0A835YKA8_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA8_9STRA)

HSP 1 Score: 287 bits (734), Expect = 2.790e-87
Identity = 146/225 (64.89%), Postives = 172/225 (76.44%), Query Frame = 1
Query: 1156 ASSWYPLPGAENEVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            A+   P P +  EVA+LLSGGVDSSVAL LL +QG+K+RAFYLKIWLEDELAHL ECPWEEDL +A+AVC+QA VPLEVV LQ+EYWD VV YTV EAR GRTPNPD+MCN+RIKFGMF+++VGRHF+ VATGHYA +   G+     AE        G GGG   + RLL SPD VKDQTYFLC L+Q QL +ALFP+G  TK+ +R  AE ++LPTK R DSQ
Sbjct:    4 AAGTSPWPNSHEEVAVLLSGGVDSSVALNLLLEQGHKVRAFYLKIWLEDELAHLGECPWEEDLQFAQAVCDQARVPLEVVSLQREYWDLVVGYTVAEARAGRTPNPDIMCNNRIKFGMFFEYVGRHFKKVATGHYA-VVAPGEGGGSGAE--------GEGGG---EARLLRSPDPVKDQTYFLCGLSQAQLSRALFPVGALTKEEVRRQAERFNLPTKARPDSQ 216          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: L1IST2_GUITC (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IST2_GUITC)

HSP 1 Score: 272 bits (696), Expect = 1.900e-81
Identity = 134/217 (61.75%), Postives = 161/217 (74.19%), Query Frame = 1
Query: 1180 GAENEVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            G   EVA+LLSGGVDSSVAL L++ QG+K RAFYL+IWLEDELAHL ECPWEED +YA +V EQ  VPLE + LQ+EYW+QVV Y + EA+ GRTPNPD+MCNSRIKFGMF ++VG+HF  VA+GHYA       C  DV               G    RL++SPD VKDQTYFLC L QDQL+ ALFP+GGYTK+++RELA  ++LPT+ RKDSQ
Sbjct:   41 GRSEEVAVLLSGGVDSSVALELVRRQGFKPRAFYLRIWLEDELAHLGECPWEEDWSYASSVAEQLKVPLESISLQEEYWEQVVEYLIREAKMGRTPNPDIMCNSRIKFGMFEEYVGKHFSRVASGHYAV-----SCHDDV---------------GTRPSRLMMSPDKVKDQTYFLCNLRQDQLKHALFPIGGYTKEKVRELAREFNLPTQRRKDSQ 237          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: A0A0F9YVQ7_9BACT (tRNA-specific 2-thiouridylase MnmA n=1 Tax=candidate division TM6 bacterium GW2011_GWF2_32_72 TaxID=1619079 RepID=A0A0F9YVQ7_9BACT)

HSP 1 Score: 265 bits (676), Expect = 1.880e-79
Identity = 130/213 (61.03%), Postives = 159/213 (74.65%), Query Frame = 1
Query: 1192 EVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            ++A+L+SGGVDSSVALRLL+DQG+ + AFYLKIWLEDEL+ L ECPWEEDL+YAKAVCEQAGVPLEV+ LQKEYWD+VVSYT+ E + GRTPNPD++CN R+KFG F+D +   F  VATGHYAR+E                E +G       +  L ++PD +KDQTYFL  L+Q QL KALFPLG Y K ++RELA+ +DLP K RKDSQ
Sbjct:    2 KIAVLVSGGVDSSVALRLLKDQGHDLTAFYLKIWLEDELSFLGECPWEEDLSYAKAVCEQAGVPLEVISLQKEYWDRVVSYTISEVKAGRTPNPDILCNQRVKFGAFFDKISPEFEKVATGHYARVE----------------EKDG-------RYLLKMTPDPIKDQTYFLSHLSQAQLSKALFPLGEYNKGQVRELAQRFDLPNKVRKDSQ 191          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: A0A0G4FIA7_VITBC (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FIA7_VITBC)

HSP 1 Score: 268 bits (684), Expect = 9.230e-78
Identity = 189/530 (35.66%), Postives = 249/530 (46.98%), Query Frame = 1
Query:  247 LPPRLQAAVEMLDRDTDLKSKSKLLVELGDAFARTDAAVLPAPPTGDDSNIEASGVAADGWI--SQRVPGCVSEVYVALRVDKSPQSASPASRRKAAAVDNSLGTGGDGGVVSIRGTADSRLSRGLLALLALGLQGESPRAVLSLRGKHLATAVGMRAGLTDSRINGLGNLLRVIQDQVREHFRHAAAGAAAXXXXXXXXXXXXXXSGAPRAGDAVPPVPADLDDFHGKVPPRGTINSSSINGVVARTGPRLETAVAAKPPPPRPVASAGTPRATAAAPVFVDLSSTSTGTSPAGLDPNRSWGDDASSWYPLPGAENEVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            LP + + A+E L      K +   LV LGD   R +               +  G   DG+   +++VPGCV+ V V   +D                             V + GTAD+R+S+GL+AL+A  L+G     VL++     A +  M + LT  R+NGL +L+  IQ Q+                                                          +S + GV    G   E+  +A         SAG+       P FV                             L  A  EVA+LLSGGVDSSVA RLL D+G ++RAFYL+IWLEDEL+HL ECPWEEDL +A+  C+Q  +PLE+V LQ  YWD VV YT+ EA  GRTPNPDVMCN+R+KFG F D  GRHF+ VATGHYA++                ++ NG        VRL  SPD +KDQTYFLC L+Q+QL  A FP+G + K R+R+LA  Y LPT +R+DSQ
Sbjct:   34 LPLQAEGALESLRAQPSQKDRFLHLVRLGDELTRRN---------------QQPGGLPDGFEQRAEKVPGCVATVKVLATLDDD--------------------------AVKVYGTADARVSQGLVALVAEALEGLPAPRVLAVPPDAFAGSTAMASFLTPGRLNGLRSLIMTIQRQI----------------------------------------------------------ASRVAGV----GEEQESETSA---------SAGSEGLPLGPPSFV-----------------------------LSEAAGEVAVLLSGGVDSSVAARLLVDRGERVRAFYLRIWLEDELSHLGECPWEEDLRFARDTCDQLKIPLELVSLQDSYWDSVVRYTISEAAAGRTPNPDVMCNTRVKFGAFCDDHGRHFKRVATGHYAQVR--------------RDQENG-------PVRLFRSPDRIKDQTYFLCGLSQEQLAMADFPIGTFDKARVRQLARDYSLPTASRRDSQ 401          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: A0A2J0LXT3_9BACT (tRNA-specific 2-thiouridylase MnmA n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A2J0LXT3_9BACT)

HSP 1 Score: 259 bits (661), Expect = 2.570e-77
Identity = 125/213 (58.69%), Postives = 158/213 (74.18%), Query Frame = 1
Query: 1192 EVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            ++AML+SGGVDSSVALRLL+ +G+++ AFYLKIWLEDEL+ L ECPWE+DL+Y +AVCEQAGVPLE+VP QKEYW++VV YT+DE + GRTPNPD++CN+RIKFG FYD++G  F  +ATGHYAR+E                E +G          L  +PDA+KDQTYFL  LTQ QL +ALFP+GGY K  +R+LA  ++LP   RKDSQ
Sbjct:    2 KIAMLVSGGVDSSVALRLLKAEGHEVTAFYLKIWLEDELSFLGECPWEDDLSYVRAVCEQAGVPLEIVPFQKEYWERVVVYTIDEVKNGRTPNPDMLCNARIKFGAFYDYIGDRFEKIATGHYARVE----------------EKDG-------VFLLKKTPDAIKDQTYFLSQLTQKQLSRALFPIGGYEKKEVRKLALKFELPNALRKDSQ 191          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: A0A847Z1X8_9BACT (tRNA-uridine 2-sulfurtransferase (Fragment) n=1 Tax=Candidatus Kuenenbacteria bacterium TaxID=2699743 RepID=A0A847Z1X8_9BACT)

HSP 1 Score: 252 bits (643), Expect = 4.790e-76
Identity = 120/213 (56.34%), Postives = 157/213 (73.71%), Query Frame = 1
Query: 1192 EVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            ++A+L SGGVDSSVALRLL+DQG+K+ AFY+KIW+ED+ + L +CPWEEDL+Y + VC+QA VPLE+VPLQKEYW +VV+  + E + GRTPNPD++CN  IKFG+FYD++G+ F  VATGHYA++E              A  T   GGGG +   L  SPD +KDQTYFL  L Q+QL +A+FP+G Y K+ +R+LA  Y LP K+RKDSQ
Sbjct:    2 KIAVLASGGVDSSVALRLLKDQGHKLTAFYIKIWMEDKYSFLGKCPWEEDLSYLEKVCKQAKVPLEIVPLQKEYWARVVAGAIKEVKAGRTPNPDILCNQFIKFGVFYDYIGKGFDRVATGHYAQVE------EHHPGPRQARPTPPQGGGGSKVYYLKRSPDKIKDQTYFLARLNQEQLARAIFPIGQYAKEEVRKLARKYKLPNKDRKDSQ 208          
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Match: A0A5J4Z0A3_PORPP (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0A3_PORPP)

HSP 1 Score: 264 bits (674), Expect = 6.500e-76
Identity = 134/213 (62.91%), Postives = 157/213 (73.71%), Query Frame = 1
Query: 1192 EVAMLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYAKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIKFGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQEKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYDLPTKNRKDSQ 1830
            EVA+LLSGGVDSSVALRL+ +QGYK+  FYLKIWL+DEL+HLNECPWEED+AYA AVCEQAG+ L  + LQ +YWDQVVSYT+ EAR GRTPNPDVMCNSRIKFG+F D VG+HF+ VA+GHYAR+E               E   G       K+ L  S D  KDQTYFL  LT  QL KA+FP+G Y K+ +R LAE +DLP K+RKDSQ
Sbjct:  253 EVAVLLSGGVDSSVALRLVLEQGYKVVPFYLKIWLQDELSHLNECPWEEDVAYATAVCEQAGLQLHTLDLQHDYWDQVVSYTISEARAGRTPNPDVMCNSRIKFGVFLDRVGKHFKRVASGHYARIEID-------------ETVPG-------KLLLSRSVDTHKDQTYFLANLTTAQLSKAMFPIGMYDKNTVRMLAERFDLPNKSRKDSQ 445          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6104.14653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9B2_9PHAE6.010e-20457.52tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
D8LCG7_ECTSI1.230e-10979.11tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
W7TJQ7_9STRA8.060e-8942.89tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
A0A835YKA8_9STRA2.790e-8764.89tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
L1IST2_GUITC1.900e-8161.75tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
A0A0F9YVQ7_9BACT1.880e-7961.03tRNA-specific 2-thiouridylase MnmA n=1 Tax=candida... [more]
A0A0G4FIA7_VITBC9.230e-7835.66tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
A0A2J0LXT3_9BACT2.570e-7758.69tRNA-specific 2-thiouridylase MnmA n=2 Tax=Candida... [more]
A0A847Z1X8_9BACT4.790e-7656.34tRNA-uridine 2-sulfurtransferase (Fragment) n=1 Ta... [more]
A0A5J4Z0A3_PORPP6.500e-7662.91tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6104contigL-elsbetiae_contig6104:1762..4053 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.1
Seed ortholog evalue2.1e-93
Seed eggNOG ortholog2880.D8LCG7
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K13523,ko:K21027
KEGG ReactionR02241,R09034,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04072,map00561,map00564,map01100,map01110,map04072
KEGG ModuleM00089
Hectar predicted targeting categorychloroplast
EggNOG free text desc.mitochondrial tRNA thio-modification
EggNOG OGsCOG0482@1,KOG2805@2759
EC2.3.1.51,2.8.1.14
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03016
Ec32 ortholog descriptionRossmann-like alpha/beta/alpha sandwich fold
Ec32 orthologEc-26_004980.1
Exons2
Model size1875
Cds size1875
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.747951-CDS-L-elsbetiae_contig6104:1761..23041622816667.747951-CDS-L-elsbetiae_contig6104:1761..2304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6104 1762..2304 -
1691683725.830327-CDS-L-elsbetiae_contig6104:1761..23041691683725.830327-CDS-L-elsbetiae_contig6104:1761..2304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6104 1762..2304 -
1622816667.7597096-CDS-L-elsbetiae_contig6104:2721..40531622816667.7597096-CDS-L-elsbetiae_contig6104:2721..4053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6104 2722..4053 -
1691683725.84478-CDS-L-elsbetiae_contig6104:2721..40531691683725.84478-CDS-L-elsbetiae_contig6104:2721..4053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6104 2722..4053 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6104.14653.1prot_L-elsbetiae_contig6104.14653.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6104 1762..4053 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6104.14653.1

>prot_L-elsbetiae_contig6104.14653.1 ID=prot_L-elsbetiae_contig6104.14653.1|Name=mRNA_L-elsbetiae_contig6104.14653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=625bp
MKLDALLVSAAFLVGTAESYAPFSAARCSFNRQRSGRDHDTGAVRGRKRP
RAHSTQMDSSNTRGSPAAPEDHVMLPPPAPTGLPPRLQAAVEMLDRDTDL
KSKSKLLVELGDAFARTDAAVLPAPPTGDDSNIEASGVAADGWISQRVPG
CVSEVYVALRVDKSPQSASPASRRKAAAVDNSLGTGGDGGVVSIRGTADS
RLSRGLLALLALGLQGESPRAVLSLRGKHLATAVGMRAGLTDSRINGLGN
LLRVIQDQVREHFRHAAAGAAAAAGAAAAAGAAAAVSGAPRAGDAVPPVP
ADLDDFHGKVPPRGTINSSSINGVVARTGPRLETAVAAKPPPPRPVASAG
TPRATAAAPVFVDLSSTSTGTSPAGLDPNRSWGDDASSWYPLPGAENEVA
MLLSGGVDSSVALRLLQDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAY
AKAVCEQAGVPLEVVPLQKEYWDQVVSYTVDEARRGRTPNPDVMCNSRIK
FGMFYDHVGRHFRHVATGHYARLECSGDCSSDVAEIGTAEETNGSGGGGQ
EKVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGGYTKDRIRELAESYD
LPTKNRKDSQASRHKKSERTEAFW*
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mRNA from alignment at L-elsbetiae_contig6104:1762..4053-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6104.14653.1 ID=mRNA_L-elsbetiae_contig6104.14653.1|Name=mRNA_L-elsbetiae_contig6104.14653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2292bp|location=Sequence derived from alignment at L-elsbetiae_contig6104:1762..4053- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGTTAGACGCATTGCTAGTATCAGCAGCGTTCCTTGTTGGCACAGC TGAGAGCTATGCGCCTTTTTCGGCAGCCCGATGCTCGTTCAACCGTCAGC GAAGTGGTCGAGATCATGACACAGGCGCCGTGCGAGGCCGCAAGCGCCCT AGAGCTCACTCAACGCAGATGGACAGCAGTAACACCCGAGGCTCACCCGC TGCTCCTGAGGACCATGTCATGCTTCCTCCTCCTGCTCCCACAGGCCTTC CGCCACGGCTTCAGGCCGCGGTGGAGATGCTCGACCGAGACACCGACCTA AAATCCAAGAGCAAGCTTTTAGTTGAACTCGGGGACGCCTTCGCAAGAAC CGACGCAGCAGTCCTTCCAGCACCTCCCACCGGCGACGACAGCAACATCG AGGCCTCAGGTGTAGCAGCAGACGGTTGGATTTCGCAAAGAGTTCCGGGC TGCGTCTCGGAGGTATACGTGGCCCTCCGCGTCGACAAAAGCCCGCAAAG CGCGTCGCCGGCTTCACGGCGAAAAGCGGCGGCGGTGGACAATTCGCTTG GCACGGGTGGCGATGGCGGCGTCGTCTCCATCCGAGGCACGGCAGATTCC AGACTCAGCCGTGGCCTACTCGCTTTGCTGGCTCTCGGCCTACAGGGGGA GAGCCCGCGCGCGGTGCTGAGCCTGCGGGGTAAACACCTGGCGACAGCGG TGGGGATGAGGGCAGGCCTTACCGACAGCCGCATCAACGGGCTGGGGAAT CTTTTGAGGGTGATTCAAGATCAGGTCCGGGAGCATTTCCGGCACGCCGC TGCTGGGGCTGCCGCCGCTGCTGGGGCTGCCGCCGCTGCTGGAGCTGCCG CCGCTGTCTCCGGAGCTCCTAGGGCTGGGGATGCCGTGCCCCCCGTGCCC GCAGACCTCGACGATTTTCACGGGAAGGTTCCACCACGGGGCACGATCAA CAGTAGTAGTATCAATGGAGTGGTGGCAAGAACAGGACCACGATTAGAAA CAGCAGTGGCAGCCAAACCGCCGCCGCCGCGACCAGTGGCATCAGCAGGA ACACCGCGAGCAACGGCCGCGGCACCGGTGTTTGTAGACCTATCGAGCAC CAGCACCGGCACCAGCCCCGCCGGGTTGGATCCAAACCGCAGCTGGGGAG ACGATGCAAGCAGCTGGTACCCCTTGCCAGGTGCGGAGAACGAAGTCGCG ATGCTGCTGTCGGGAGGGGTGGATTCGTCGGTGGCGCTGCGGCTGCTTCA GGACCAAGGGTACAAGATCCGAGCCTTCTACCTCAAGATTTGGCTGGAGG ACGAGCTCGCCCACCTCAACGAGTGCCCGTGGGTGAGAGAGCTTCTTGTA TTTCGTTGTGGTCGCACGCCTGCTAAGGTACATAGCTGTCTGTCCGATCT CGATTGTTTGTTGGGCACCATGCTTTCAAGTGACGCCGTCGTGTTACCAT GGGCTGTCCGGAGCTTCGTGATTGTACCTCGTCCGAGTTTTGCTGCCTCC ATAAGTCATCTGGTGGTGTTGCGACCTCGGCGGGTTACTGTATAAGCTTT GGCCGCACGCGGTGTGCACGGAGTGGGAAGATCTGGCTTAATTTAGTGGG CGCTTCCAAGGAAAATAGCATCCGATTGGCCGATCTCACCATACCCACCC CTGTGTTCGGCACACCGCTCACCGTTGGACAACCCCTCCCCGCGTGGCCA CCGCCACACCACCCACCGCCAACTTCCCCGGCCAATACCGAACCAACAGG AGGAAGACCTAGCGTACGCCAAGGCGGTGTGCGAGCAGGCGGGCGTCCCG CTGGAGGTGGTCCCCCTGCAGAAGGAGTACTGGGACCAGGTGGTCTCGTA CACGGTGGACGAGGCCCGCAGGGGACGCACGCCCAACCCGGACGTGATGT GCAACAGCAGGATCAAGTTCGGTATGTTCTACGACCACGTCGGTAGGCAC TTCCGGCACGTCGCGACGGGGCACTACGCCAGGCTCGAGTGCTCTGGCGA CTGCAGCAGTGACGTCGCAGAGATCGGGACGGCAGAGGAGACCAACGGCA GCGGTGGTGGCGGCCAGGAGAAGGTCCGGCTGCTCCTCAGCCCCGACGCT GTCAAGGATCAGACGTACTTCCTCTGCGCGTTGACCCAGGATCAGTTGCG AAAAGCGTTGTTCCCCCTGGGTGGCTACACAAAGGACAGAATCCGAGAGC TGGCGGAGAGCTACGACCTGCCTACCAAGAACCGGAAAGACTCCCAGGCA AGCAGGCACAAGAAGAGTGAAAGAACAGAAGCCTTTTGGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6104:1762..4053-

>mRNA_L-elsbetiae_contig6104.14653.1 ID=mRNA_L-elsbetiae_contig6104.14653.1|Name=mRNA_L-elsbetiae_contig6104.14653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3750bp|location=Sequence derived from alignment at L-elsbetiae_contig6104:1762..4053- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGTTAGACGCATTGCTAGTATCAGCAGCGTTCCTTGTTGGCACAGC
TGAGAGCTATGCGCCTTTTTCGGCAGCCCGATGCTCGTTCAACCGTCAGC
GAAGTGGTCGAGATCATGACACAGGCGCCGTGCGAGGCCGCAAGCGCCCT
AGAGCTCACTCAACGCAGATGGACAGCAGTAACACCCGAGGCTCACCCGC
TGCTCCTGAGGACCATGTCATGCTTCCTCCTCCTGCTCCCACAGGCCTTC
CGCCACGGCTTCAGGCCGCGGTGGAGATGCTCGACCGAGACACCGACCTA
AAATCCAAGAGCAAGCTTTTAGTTGAACTCGGGGACGCCTTCGCAAGAAC
CGACGCAGCAGTCCTTCCAGCACCTCCCACCGGCGACGACAGCAACATCG
AGGCCTCAGGTGTAGCAGCAGACGGTTGGATTTCGCAAAGAGTTCCGGGC
TGCGTCTCGGAGGTATACGTGGCCCTCCGCGTCGACAAAAGCCCGCAAAG
CGCGTCGCCGGCTTCACGGCGAAAAGCGGCGGCGGTGGACAATTCGCTTG
GCACGGGTGGCGATGGCGGCGTCGTCTCCATCCGAGGCACGGCAGATTCC
AGACTCAGCCGTGGCCTACTCGCTTTGCTGGCTCTCGGCCTACAGGGGGA
GAGCCCGCGCGCGGTGCTGAGCCTGCGGGGTAAACACCTGGCGACAGCGG
TGGGGATGAGGGCAGGCCTTACCGACAGCCGCATCAACGGGCTGGGGAAT
CTTTTGAGGGTGATTCAAGATCAGGTCCGGGAGCATTTCCGGCACGCCGC
TGCTGGGGCTGCCGCCGCTGCTGGGGCTGCCGCCGCTGCTGGAGCTGCCG
CCGCTGTCTCCGGAGCTCCTAGGGCTGGGGATGCCGTGCCCCCCGTGCCC
GCAGACCTCGACGATTTTCACGGGAAGGTTCCACCACGGGGCACGATCAA
CAGTAGTAGTATCAATGGAGTGGTGGCAAGAACAGGACCACGATTAGAAA
CAGCAGTGGCAGCCAAACCGCCGCCGCCGCGACCAGTGGCATCAGCAGGA
ACACCGCGAGCAACGGCCGCGGCACCGGTGTTTGTAGACCTATCGAGCAC
CAGCACCGGCACCAGCCCCGCCGGGTTGGATCCAAACCGCAGCTGGGGAG
ACGATGCAAGCAGCTGGTACCCCTTGCCAGGTGCGGAGAACGAAGTCGCG
ATGCTGCTGTCGGGAGGGGTGGATTCGTCGGTGGCGCTGCGGCTGCTTCA
GGACCAAGGGTACAAGATCCGAGCCTTCTACCTCAAGATTTGGCTGGAGG
ACGAGCTCGCCCACCTCAACGAGTGCCCGTGGATGAAGTTAGACGCATTG
CTAGTATCAGCAGCGTTCCTTGTTGGCACAGCTGAGAGCTATGCGCCTTT
TTCGGCAGCCCGATGCTCGTTCAACCGTCAGCGAAGTGGTCGAGATCATG
ACACAGGCGCCGTGCGAGGCCGCAAGCGCCCTAGAGCTCACTCAACGCAG
ATGGACAGCAGTAACACCCGAGGCTCACCCGCTGCTCCTGAGGACCATGT
CATGCTTCCTCCTCCTGCTCCCACAGGCCTTCCGCCACGGCTTCAGGCCG
CGGTGGAGATGCTCGACCGAGACACCGACCTAAAATCCAAGAGCAAGCTT
TTAGTTGAACTCGGGGACGCCTTCGCAAGAACCGACGCAGCAGTCCTTCC
AGCACCTCCCACCGGCGACGACAGCAACATCGAGGCCTCAGGTGTAGCAG
CAGACGGTTGGATTTCGCAAAGAGTTCCGGGCTGCGTCTCGGAGGTATAC
GTGGCCCTCCGCGTCGACAAAAGCCCGCAAAGCGCGTCGCCGGCTTCACG
GCGAAAAGCGGCGGCGGTGGACAATTCGCTTGGCACGGGTGGCGATGGCG
GCGTCGTCTCCATCCGAGGCACGGCAGATTCCAGACTCAGCCGTGGCCTA
CTCGCTTTGCTGGCTCTCGGCCTACAGGGGGAGAGCCCGCGCGCGGTGCT
GAGCCTGCGGGGTAAACACCTGGCGACAGCGGTGGGGATGAGGGCAGGCC
TTACCGACAGCCGCATCAACGGGCTGGGGAATCTTTTGAGGGTGATTCAA
GATCAGGTCCGGGAGCATTTCCGGCACGCCGCTGCTGGGGCTGCCGCCGC
TGCTGGGGCTGCCGCCGCTGCTGGAGCTGCCGCCGCTGTCTCCGGAGCTC
CTAGGGCTGGGGATGCCGTGCCCCCCGTGCCCGCAGACCTCGACGATTTT
CACGGGAAGGTTCCACCACGGGGCACGATCAACAGTAGTAGTATCAATGG
AGTGGTGGCAAGAACAGGACCACGATTAGAAACAGCAGTGGCAGCCAAAC
CGCCGCCGCCGCGACCAGTGGCATCAGCAGGAACACCGCGAGCAACGGCC
GCGGCACCGGTGTTTGTAGACCTATCGAGCACCAGCACCGGCACCAGCCC
CGCCGGGTTGGATCCAAACCGCAGCTGGGGAGACGATGCAAGCAGCTGGT
ACCCCTTGCCAGGTGCGGAGAACGAAGTCGCGATGCTGCTGTCGGGAGGG
GTGGATTCGTCGGTGGCGCTGCGGCTGCTTCAGGACCAAGGGTACAAGAT
CCGAGCCTTCTACCTCAAGATTTGGCTGGAGGACGAGCTCGCCCACCTCA
ACGAGTGCCCGTGGGAGGAAGACCTAGCGTACGCCAAGGCGGTGTGCGAG
CAGGCGGGCGTCCCGCTGGAGGTGGTCCCCCTGCAGAAGGAGTACTGGGA
CCAGGTGGTCTCGTACACGGTGGACGAGGCCCGCAGGGGACGCACGCCCA
ACCCGGACGTGATGTGCAACAGCAGGATCAAGTTCGGTATGTTCTACGAC
CACGTCGGTAGGCACTTCCGGCACGTCGCGACGGGGCACTACGCCAGGCT
CGAGTGCTCTGGCGACTGCAGCAGTGACGTCGCAGAGATCGGGACGGCAG
AGGAGACCAACGGCAGCGGTGGTGGCGGCCAGGAGAAGGTCCGGCTGCTC
CTCAGCCCCGACGCTGTCAAGGATCAGACGTACTTCCTCTGCGCGTTGAC
CCAGGATCAGTTGCGAAAAGCGTTGTTCCCCCTGGGTGGCTACACAAAGG
ACAGAATCCGAGAGCTGGCGGAGAGCTACGACCTGCCTACCAAGAACCGG
AAAGACTCCCAGGCAAGCAGGCACAAGAAGAGTGAAAGAACAGAAGCCTT
TTGGTAAGAGGAAGACCTAGCGTACGCCAAGGCGGTGTGCGAGCAGGCGG
GCGTCCCGCTGGAGGTGGTCCCCCTGCAGAAGGAGTACTGGGACCAGGTG
GTCTCGTACACGGTGGACGAGGCCCGCAGGGGACGCACGCCCAACCCGGA
CGTGATGTGCAACAGCAGGATCAAGTTCGGTATGTTCTACGACCACGTCG
GTAGGCACTTCCGGCACGTCGCGACGGGGCACTACGCCAGGCTCGAGTGC
TCTGGCGACTGCAGCAGTGACGTCGCAGAGATCGGGACGGCAGAGGAGAC
CAACGGCAGCGGTGGTGGCGGCCAGGAGAAGGTCCGGCTGCTCCTCAGCC
CCGACGCTGTCAAGGATCAGACGTACTTCCTCTGCGCGTTGACCCAGGAT
CAGTTGCGAAAAGCGTTGTTCCCCCTGGGTGGCTACACAAAGGACAGAAT
CCGAGAGCTGGCGGAGAGCTACGACCTGCCTACCAAGAACCGGAAAGACT
CCCAGGCAAGCAGGCACAAGAAGAGTGAAAGAACAGAAGCCTTTTGGTAA
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