mRNA_L-elsbetiae_contig6066.14603.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6066.14603.1
Unique NamemRNA_L-elsbetiae_contig6066.14603.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: D8LDR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR8_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 6.250e-55
Identity = 134/273 (49.08%), Postives = 157/273 (57.51%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETP-------------------------ALVRVLELGCGTGLAGLAAAFSFRRRESG---DNDSESQ---AAFPCRYRPSSEYPSSPTTVEDG-----VEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWP 1009
            VSNSSEGTGLFTWDG+VLL KYLEH AVAMRRDF  Q+    T+P+    EGA  HG  +    G +  +                              A +RVLELGCGTGLAGLAAAF+F RR SG   D++SE        PCR R   E  +     +       V VVLTDLEYAL NARAN   N+SSL+AVG+ V+++ELDWCRP P +L                      ++FDLILAADVVWLD+LV PLVRTLERLTAGWP
Sbjct:  236 VSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFCEQQPCHSTQPSYRHPEGA-GHGSSVTVAAGDSADVXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAPIRVLELGCGTGLAGLAAAFAFGRRHSGTSGDDNSEVNHPPPPSPCRRRNPLEGENDEGVAQCASPPAQVAVVLTDLEYALTNARANTFLNSSSLEAVGAEVSSIELDWCRPLPRELSDK-------------------EAFDLILAADVVWLDDLVTPLVRTLERLTAGWP 488          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A6H5LL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL33_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.700e-18
Identity = 66/127 (51.97%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGV-------INPTGGK------TNSLSKETP----------ALVRVLELGCGTGLAGLAAAFSFRRRESG 610
            VSNSSEGTGLFTWDG+VLL KYLEH AVAMRRDF  Q+    T+P+    EGA     V       +N   G       TNS                A +RVLELG GTGLAGLAAAF+F RR SG
Sbjct:  275 VSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFREQQPCLSTQPSCLHPEGAGDGSSVTVVDSADVNINNGSCSGCRSTNSXXXXXXXXXXXXXXRTAPIRVLELGSGTGLAGLAAAFAFGRRHSG 401          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A6H5L4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A1_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.380e-17
Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 3
Query: 1128 QKCPGAVVASPPRASPRPQRPRGGQRVLLAYQWRSQRTGNALLEELEKAFHVREIQPKECHREYLPSSNLCLFDIVRR 1361
            QKC G   A+  R+  R  RP  G+RVLLAYQWRS+RTG ALLEEL   F VREI P+ECH +YLPS+NLCL + VRR
Sbjct:   89 QKCEGGGRAA--RSVGR-SRPSAGRRVLLAYQWRSERTGRALLEELGACFRVREIPPEECHPDYLPSTNLCLLEAVRR 163          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: W4GN74_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GN74_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.230e-15
Identity = 69/232 (29.74%), Postives = 93/232 (40.09%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994
            V N+ +GTGL  WDGSV+L KYLEH   +  ++ D+ R +                                      RVLELG GTGL GLAAA                                   V     V LTDL Y LDN  ANV  NASS+ A  ++V+  ELDW +  P  L                      D+ D+++ +D+VW++ L++ LV T+  L
Sbjct:  122 VGNTGKGTGLTIWDGSVVLAKYLEHATSSFVQNEDSVRGK--------------------------------------RVLELGAGTGLVGLAAA-----------------------------------VCGASHVTLTDLAYTLDNLSANVRANASSIAA--TSVDVAELDWFKAAPLSLT---------------------DNVDVVVGSDIVWVESLIDALVATIASL 257          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A8K1CNV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV0_PYTOL)

HSP 1 Score: 85.1 bits (209), Expect = 2.790e-14
Identity = 71/232 (30.60%), Postives = 90/232 (38.79%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994
            V NS  GTGL TWDGS++L KYLEH                        F   + HG                     RVLE+G GTGL G++A                                         +V+LTDL Y +DN   NV       + + + V  +ELDW +P   DL                     GD FDLILA+DVVW++ELV PLV+TL+ L
Sbjct:  129 VENSGLGTGLTTWDGSIVLAKYLEHR-----------------------FGNGQLHGK--------------------RVLEVGAGTGLVGISAGLL-----------------------------------GAEQVLLTDLAYTMDNLARNVELTGQHAQQIKARVQPVELDWFQPR-SDL---------------------GD-FDLILASDVVWVEELVRPLVQTLQTL 259          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A448ZF24_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZF24_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.700e-13
Identity = 73/238 (30.67%), Postives = 95/238 (39.92%), Query Frame = 2
Query:  302 SNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNA---SSLKAVGSTVNAMELDWCRPPPDD----LFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994
            SNS  GTG   WDG+V L  +L HH    R + D    R                            SLS E     RVLELG GTGL G+AA  +                                       V++TDLEY++ N  AN+  N    +S +   ST++A  LDWC P   +    ++         +P PP          D++LAADVVW+D LV PLV TL R+
Sbjct:  174 SNSGLGTGTNLWDGAVALASFLGHHQGTARSNKDKDNDRDP--------------------------SLSVEGK---RVLELGAGTGLVGIAAHLAL----------------------------------GASRVLVTDLEYSMANLEANLSANRCHRTSAERRDSTIDARVLDWCDPSSCETALSIWNESGGAHSHSPPPP----------DVVLAADVVWVDFLVPPLVETLRRV 338          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A5D6YJY0_9STRA (GLTP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJY0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.640e-13
Identity = 74/235 (31.49%), Postives = 90/235 (38.30%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAME---LDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994
            V NS +GTGL TWDGSV+L K+LEH      R                                GK            RVLE+G GTGLAGL+AA    R                                   EVVLTDL Y ++N   N     ++ +  G  V A+    LDW  PP D                  VG     + D +LAADVVW++EL+ PLVRTL  L
Sbjct:  158 VGNSGKGTGLTTWDGSVVLAKHLEHARAGELR--------------------------------GK------------RVLEVGAGTGLAGLSAALLGAR-----------------------------------EVVLTDLAYTMENLAGNAAHTLANARHAGVAVGAVHTQVLDWFAPPTD------------------VG-----ALDFVLAADVVWVEELIAPLVRTLATL 290          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A0P1AN60_PLAHL (Putative N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN60_PLAHL)

HSP 1 Score: 81.6 bits (200), Expect = 5.360e-13
Identity = 66/236 (27.97%), Postives = 84/236 (35.59%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNA----MELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994
            + NS +GTGL TWDGSV+L KYLEH     RRD                                             RV+ELG GTGL G+AAA    +                                   +V+L+DL Y +DN   NV        AVG  +       ELDW  PP D                           D +LA+DVVW++ L+ PLV+T + L
Sbjct:  144 IGNSGKGTGLITWDGSVVLAKYLEHER---RRDIAGS-----------------------------------------RVVELGAGTGLVGIAAALLGAK-----------------------------------QVILSDLSYVIDNLAKNVAETKKLADAVGKPIQCDILTQELDWFNPPTDLK-----------------------DIDFVLASDVVWIESLIPPLVKTFDTL 277          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A418B4Q7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B4Q7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.340e-13
Identity = 66/235 (28.09%), Postives = 90/235 (38.30%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERLTAG 1003
            V N+ +GTGL  WDGSV+L +YLEH ++++  D DN R +                                      RVLELG GTGL GLAA+                    C                    V LTDL YAL+N   NV  N  ++      V+  ELDW  P                           D  D+++ +D+VW++ L+EPLV+T+  L  G
Sbjct:  149 VGNTGKGTGLTIWDGSVVLARYLEHVSLSVGHD-DNVRGK--------------------------------------RVLELGAGTGLVGLAASL-------------------C----------------GASHVTLTDLAYALENLSRNVELNRGAISPAAVAVS--ELDWFAPQSSSFT---------------------DGVDMVVGSDIVWVESLIEPLVQTIAVLLKG 286          
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A662YK58_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YK58_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 8.860e-13
Identity = 71/236 (30.08%), Postives = 88/236 (37.29%), Query Frame = 2
Query:  299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTV----NAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994
            V NS +GTGL TWDGSV+L KYLEH     RRD                                             RV+ELG GTGL G++AA    R                                   EV+LTDL+Y +DN   NV +    L   G  V    +   LDW  PP DDL                       + D +LA+DVVW++EL+ PLV T + L
Sbjct:  167 VGNSGQGTGLTTWDGSVVLAKYLEHQR---RRDIAGS-----------------------------------------RVVELGSGTGLVGISAALLGAR-----------------------------------EVILTDLDYVVDNLAKNVAQTLQLLANEGGKVECKVSTQILDWFSPP-DDL----------------------GNIDFLLASDVVWVEELIPPLVTTFDVL 300          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR8_ECTSI6.250e-5549.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LL33_9PHAE1.700e-1851.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4A1_9PHAE1.380e-1762.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4GN74_9STRA5.230e-1529.74Uncharacterized protein n=8 Tax=Aphanomyces astaci... [more]
A0A8K1CNV0_PYTOL2.790e-1430.60Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A448ZF24_9STRA1.700e-1330.67Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A5D6YJY0_9STRA2.640e-1331.49GLTP domain-containing protein n=1 Tax=Pythium bra... [more]
A0A0P1AN60_PLAHL5.360e-1327.97Putative N2,N2-dimethylguanosine tRNA methyltransf... [more]
A0A418B4Q7_9STRA7.340e-1328.09Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A662YK58_9STRA8.860e-1330.08Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6066contigL-elsbetiae_contig6066:5771..9290 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score72.0
Seed ortholog evalue3.7e-10
Seed eggNOG ortholog227086.JGI_V11_72454
Preferred nameVCPKMT
KEGG koko:K21804,ko:K21806
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0019899,GO:0032259,GO:0032780,GO:0032991,GO:0036211,GO:0043086,GO:0043170,GO:0043412,GO:0043414,GO:0043462,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051117,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.lysine N-methyltransferase activity
EggNOG OGsKOG2793@1,KOG2793@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019,ko03110
Exons6
Model size2043
Cds size627
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6066.14603.1prot_L-elsbetiae_contig6066.14603.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6066 7288..8468 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816662.0939107-UTR-L-elsbetiae_contig6066:5770..65121622816662.0939107-UTR-L-elsbetiae_contig6066:5770..6512Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 5771..6512 -
1691683721.4659173-UTR-L-elsbetiae_contig6066:5770..65121691683721.4659173-UTR-L-elsbetiae_contig6066:5770..6512Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 5771..6512 -
1622816662.1071222-UTR-L-elsbetiae_contig6066:6978..72571622816662.1071222-UTR-L-elsbetiae_contig6066:6978..7257Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 6979..7257 -
1691683721.4792373-UTR-L-elsbetiae_contig6066:6978..72571691683721.4792373-UTR-L-elsbetiae_contig6066:6978..7257Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 6979..7257 -
1622816662.1179461-UTR-L-elsbetiae_contig6066:7277..72871622816662.1179461-UTR-L-elsbetiae_contig6066:7277..7287Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 7278..7287 -
1691683721.4899216-UTR-L-elsbetiae_contig6066:7277..72871691683721.4899216-UTR-L-elsbetiae_contig6066:7277..7287Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 7278..7287 -
1622816662.1634996-UTR-L-elsbetiae_contig6066:8468..85161622816662.1634996-UTR-L-elsbetiae_contig6066:8468..8516Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 8469..8516 -
1691683721.530586-UTR-L-elsbetiae_contig6066:8468..85161691683721.530586-UTR-L-elsbetiae_contig6066:8468..8516Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 8469..8516 -
1622816662.1787717-UTR-L-elsbetiae_contig6066:8953..92901622816662.1787717-UTR-L-elsbetiae_contig6066:8953..9290Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 8954..9290 -
1691683721.5426407-UTR-L-elsbetiae_contig6066:8953..92901691683721.5426407-UTR-L-elsbetiae_contig6066:8953..9290Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6066 8954..9290 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816662.132156-CDS-L-elsbetiae_contig6066:7287..74591622816662.132156-CDS-L-elsbetiae_contig6066:7287..7459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6066 7288..7459 -
1691683721.5010748-CDS-L-elsbetiae_contig6066:7287..74591691683721.5010748-CDS-L-elsbetiae_contig6066:7287..7459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6066 7288..7459 -
1622816662.143324-CDS-L-elsbetiae_contig6066:7983..81611622816662.143324-CDS-L-elsbetiae_contig6066:7983..8161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6066 7984..8161 -
1691683721.5115416-CDS-L-elsbetiae_contig6066:7983..81611691683721.5115416-CDS-L-elsbetiae_contig6066:7983..8161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6066 7984..8161 -
1622816662.1535692-CDS-L-elsbetiae_contig6066:8191..84681622816662.1535692-CDS-L-elsbetiae_contig6066:8191..8468Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6066 8192..8468 -
1691683721.520166-CDS-L-elsbetiae_contig6066:8191..84681691683721.520166-CDS-L-elsbetiae_contig6066:8191..8468Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6066 8192..8468 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6066.14603.1

>prot_L-elsbetiae_contig6066.14603.1 ID=prot_L-elsbetiae_contig6066.14603.1|Name=mRNA_L-elsbetiae_contig6066.14603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
MRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVR
VLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPT
TVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPP
DDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTL
ERLTAGWP*
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mRNA from alignment at L-elsbetiae_contig6066:5771..9290-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6066.14603.1 ID=mRNA_L-elsbetiae_contig6066.14603.1|Name=mRNA_L-elsbetiae_contig6066.14603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3520bp|location=Sequence derived from alignment at L-elsbetiae_contig6066:5771..9290- (Laminarionema elsbetiae ELsaHSoW15)
GGGTGGAGCCCCCTGTCAACGGCAACCCCATCGGAGACCATTCCAAAGAA CTGCAGGGTCCACGGCAGCGTCAACGAGAAACCCAAGGCGGCACCCCCTC AGCAACAGGAGAGCATGGCGCCTTCTCCGGGCGCAAGCGGCAGGTTCACG GGGGCGCCACCGTCTCTCCCTCCCGAGCAAGCAAGCGAAGAAACCGACGG CGCGGAGGTGCTAGCGCTCCCGTGGAGACGGTTTGACCAAGACCTGGGGG GAGGAAGCGGAGAGGGATTTCAGATCTGCGGGAGGCGGATGGTAATCGGT TTCCAACTCTAGCGAGGGGACCGGACTGTTCACATGGGTGAGCGCGAGAA AGGGAGAAAGAAGGAGAGGAGTGAGAGAGGGAGCCTCCGTTCCTATGCAA TGTGCTCTCTTGGACGAGGGACGGACGCGTGTACACACGTTTACAGGCCC TACGGCCCTACCGTGCGTGTAAGACCGGTGCGCTGTGGTCGTATATACAA TGCGAGACTCTCACCCAGCGGCGTGCAGATGTATCCCACGCGAAACTGCG ATTTTGTGGGTGCATTCGCAAAGGGGCGACAATCTTGCCTTTTTTTCTAT GTACGATGTAGCGTGCGTTCATCTGTCCCAACCTACCCTCGGCGGCGAAG CTGCATCTCGACGATATGTGCTGGAAGAACAGTAACATGAAAGCTACGAA TTGACGCAAAATCCAACAGAGGCGCCTTTCACGCCGCCCCGCCCCTTCGT TCTCTATTTCGCATCTCGTGCCAGGACGGCTCCGTGTTGCTTACGAAATA TCTCGAGCACCACGCCGTTGCAATGCGGCGAGACTTCGATAATCAGCGGT CTCGGTGCCAGACCCGCCCGACGCCCACTACATTTGAGGGCGCCGAAAGT CATGGTGGCGTCATCAATCCTACAGGTGGTAAAACCAACAGCCTTAGCAA GGAAACACCTGCACTTGTTCGCGTCCTAGAGCTCGGCTGCGGTACGGGTC TCGCAGGCCTTGCGGCGGCGTTTTCGTTTCGGAGACGAGAGAGTGGAGAC AACGACAGTGAAAGCCAGGCCGCTTTCCCGTGCCGCTATCGACCCAGCAG TACTTGCGAAGGAGATGAAAAAGGGTGAGGTGAATACCCTTCGTCTCCGA CAACAGTGGAAGACGGTGTAGAGGTCGTGTTGACGGATCTTGAGTACGCA CTGGACAACGCTCGAGCAAACGTTCATCGCAATGCGTCATCGCTCAAAGC CGTCGGCAGCACGGTGAACGCGATGGAGCTCGACTGGTGCCGTCCGCCGC CGGACGAGTTCGTCGGTGAGGCAGTAACTCTATCGTTTATAGATTCCGGC TAGTGGCAAGAGCAATACATCCCAGCCTACGCAGAAATAGGGCACCTGGC GAAAATTCATGGGGATAGAGAGCAACCCAGAAGTATGAGGGGCGGAATAC GCTTGTCGAAATGGAATGTAACGGTCTTCGCGCTCGTGTGTCGGTGAGTC ATTTTCCCCGAAGCGCACGGCGACATTTACTTGTGGGGTGTAGGGACTCC AAGGCATCGCCCTTTCGGCGAAGTGTGCTTTGTATCTTGTTGGCTTTTCT GTTTTGCGCATTTGAGGCAAGGAGATGACGAAGGTTGTTGCCACTCCCAA ATCGAGCACGGCCGTAGCAACCCTTCATGAATGAAAAGTGGTTAAGCAGT AGGAAGGAGTGGCGCGTATGTGGAAGACGCCGCTTTGCGCGCAGACCTCT CAATGATGACCGATTTTACTATATTTTGGGGAAAATCGCACTCGAATGCT GACGTTGGACACCCTGACTGGACGCTTGAAGTTTGTTCCAAAACTGCCGC TCTCCAAAACGTCCAAACCCTCTCCCCCCGTTCGTCGGCTGTGCGGGCGG CGACTCGTTCGACCTAATCCTGGCCGCCGATGTGGTCTGGTTGGATGAGC TAGTCGAGCCTCTTGTGCGCACGCTCGAGCGCCTCACCGCAGGCTGGCCT TGATGCAGTGGGGGTGACGGAAGACAACAAGAGAATCGGCAAGCGGGACC GGCTATGCCGTCAGCGCCGTCAATAGTAGCCCAGGGGCTAGGGTTGGCCG GAGAGAGTGTGGCCACCGCGCACGCGGACGGCTTCACGCAGAAATGTCCA GGTGCTGTCGTCGCAAGTCCACCACGGGCTTCGCCTCGGCCTCAGAGGCC GAGAGGCGGGCAGCGCGTGTTGTTGGCGTACCAGTGGAGGAGCCAACGAA CGGGGAACGCATTGCTGGAGGAGCTCGAGAAGGCTTTTCATGTCCGGGAG ATCCAGCCGAAGGTGCGTCGCAGGCAGCGAAGTGGTGGTTGCCGTGTGTT TTTTTATGTTTCGTCAACTGAGGCAGGAGAACAACTGCTCACTTGAAAGC CACTTTCGGATCGATGCCTTGCTTTGAGGAAGGGCGCTGCCGCAGATTGA GGAGGGTGTTTTGTTTTGTTTTTTAGATTGCTGGCAAAGCGTTTCCGCTA TTATTTCGTGGCACACTGAATTTCTCTGAATGAAAATGAGATTTACATGA CATCTCCCATCTCCAAGCTGTGTAGTCTTTATCCTGTCACAGCTCGCGCT CGAAAGTCGGATTTCCGGAGTTTTCTCCCTCCATTGCTCTGTTGATAGAC ACGTTCGAACGTCATTAGACTCCCATAGAGTCACAATCAGGCAAAATGTT GTCGTTTCGGAATATGATAAACCCGCTTGACTTATAAACCTCGGGCGTCG TTCTGTTTATGTTTTATATTGGTGGCAGGAATGCCACCGGGAATATTTGC CGTCGAGCAATCTCTGCTTGTTTGACATTGTGCGGCGATAAAGAAACCGA GGGGCGCTCTGCGGTGGCACCGATGTAAGGTGGCTGGCTAAGTCGTCGAT TGAAGGCATTGTGTTCATGGGGATATTTATCATTCTGCGGAATTTAACGG TAGTTCGATTTGTCTTAAAATGTACGTTCAGTGGCCGCGGGGGGGCAAAA GGTATTTTTCATTCTGCGCATGTGTGCGATAGGCCTGCGCAGTGCATGGG GGGTGGAGGCTAAATATAGACGTGCTTCGAGGCTTGAAGTTCCCGATTGC AAGAGCTGAGCATATAGACTGTGGGGATCCGACTAGAAAGTAGGGGTCGG CATTGCGCGTGTCGACCGGCGTTTATGTTCGTTACGGCTTAGCTTTGCCC TCAATCGCAGGCTAGACAAGTGTTGAACAATCACAAGTAGTAAAGCTGCT TCGAAGTCGACGACACGATGGCTGCTGACGCCGCCACACCCACGTTGAAC ACCCTTGTTGAAGAAAGCGTCACGAGGTCTGGAAACGTTGAGACATGATG GATTGCGAAAGAAGAATTCGAATGGTTCGGATTAGTACGGACAAATGAAG GTACTGGATAGAGAGGTCGGGACGGGTTTTAATGTAAAGACAACAACAGC AACGACAACAACAAAGAAGAAATTGGAATGCGCGCACTGAGGCCCATGAT TATCGAAGGTTGATTGTTTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6066:5771..9290-

>mRNA_L-elsbetiae_contig6066.14603.1 ID=mRNA_L-elsbetiae_contig6066.14603.1|Name=mRNA_L-elsbetiae_contig6066.14603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig6066:5771..9290- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGCGAGACTTCGATAATCAGCGGTCTCGGTGCCAGACCCGCCCGAC
GCCCACTACATTTGAGGGCGCCGAAAGTCATGGTGGCGTCATCAATCCTA
CAGGTGGTAAAACCAACAGCCTTAGCAAGGAAACACCTGCACTTGTTCGC
GTCCTAGAGCTCGGCTGCGGTACGGGTCTCGCAGGCCTTGCGGCGGCGTT
TTCGTTTCGGAGACGAGAGAGTGGAGACAACGACAGTGAAAGCCAGGCCG
CTTTCCCGTGCCGCTATCGACCCAGCAATGCGGCGAGACTTCGATAATCA
GCGGTCTCGGTGCCAGACCCGCCCGACGCCCACTACATTTGAGGGCGCCG
AAAGTCATGGTGGCGTCATCAATCCTACAGGTGGTAAAACCAACAGCCTT
AGCAAGGAAACACCTGCACTTGTTCGCGTCCTAGAGCTCGGCTGCGGTAC
GGGTCTCGCAGGCCTTGCGGCGGCGTTTTCGTTTCGGAGACGAGAGAGTG
GAGACAACGACAGTGAAAGCCAGGCCGCTTTCCCGTGCCGCTATCGACCC
AGCAGTGAATACCCTTCGTCTCCGACAACAGTGGAAGACGGTGTAGAGGT
CGTGTTGACGGATCTTGAGTACGCACTGGACAACGCTCGAGCAAACGTTC
ATCGCAATGCGTCATCGCTCAAAGCCGTCGGCAGCACGGTGAACGCGATG
GAGCTCGACTGGTGCCGTCCGCCGCCGGACGAGTGAATACCCTTCGTCTC
CGACAACAGTGGAAGACGGTGTAGAGGTCGTGTTGACGGATCTTGAGTAC
GCACTGGACAACGCTCGAGCAAACGTTCATCGCAATGCGTCATCGCTCAA
AGCCGTCGGCAGCACGGTGAACGCGATGGAGCTCGACTGGTGCCGTCCGC
CGCCGGACGATTTGTTCCAAAACTGCCGCTCTCCAAAACGTCCAAACCCT
CTCCCCCCGTTCGTCGGCTGTGCGGGCGGCGACTCGTTCGACCTAATCCT
GGCCGCCGATGTGGTCTGGTTGGATGAGCTAGTCGAGCCTCTTGTGCGCA
CGCTCGAGCGCCTCACCGCAGGCTGGCCTTGATTTGTTCCAAAACTGCCG
CTCTCCAAAACGTCCAAACCCTCTCCCCCCGTTCGTCGGCTGTGCGGGCG
GCGACTCGTTCGACCTAATCCTGGCCGCCGATGTGGTCTGGTTGGATGAG
CTAGTCGAGCCTCTTGTGCGCACGCTCGAGCGCCTCACCGCAGGCTGGCC
TTGA
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