mRNA_L-elsbetiae_contig6066.14603.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: D8LDR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR8_ECTSI) HSP 1 Score: 207 bits (528), Expect = 6.250e-55 Identity = 134/273 (49.08%), Postives = 157/273 (57.51%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETP-------------------------ALVRVLELGCGTGLAGLAAAFSFRRRESG---DNDSESQ---AAFPCRYRPSSEYPSSPTTVEDG-----VEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWP 1009 VSNSSEGTGLFTWDG+VLL KYLEH AVAMRRDF Q+ T+P+ EGA HG + G + + A +RVLELGCGTGLAGLAAAF+F RR SG D++SE PCR R E + + V VVLTDLEYAL NARAN N+SSL+AVG+ V+++ELDWCRP P +L ++FDLILAADVVWLD+LV PLVRTLERLTAGWP Sbjct: 236 VSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFCEQQPCHSTQPSYRHPEGA-GHGSSVTVAAGDSADVXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAPIRVLELGCGTGLAGLAAAFAFGRRHSGTSGDDNSEVNHPPPPSPCRRRNPLEGENDEGVAQCASPPAQVAVVLTDLEYALTNARANTFLNSSSLEAVGAEVSSIELDWCRPLPRELSDK-------------------EAFDLILAADVVWLDDLVTPLVRTLERLTAGWP 488
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A6H5LL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL33_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.700e-18 Identity = 66/127 (51.97%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGV-------INPTGGK------TNSLSKETP----------ALVRVLELGCGTGLAGLAAAFSFRRRESG 610 VSNSSEGTGLFTWDG+VLL KYLEH AVAMRRDF Q+ T+P+ EGA V +N G TNS A +RVLELG GTGLAGLAAAF+F RR SG Sbjct: 275 VSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFREQQPCLSTQPSCLHPEGAGDGSSVTVVDSADVNINNGSCSGCRSTNSXXXXXXXXXXXXXXRTAPIRVLELGSGTGLAGLAAAFAFGRRHSG 401
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A6H5L4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A1_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.380e-17 Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 1128 QKCPGAVVASPPRASPRPQRPRGGQRVLLAYQWRSQRTGNALLEELEKAFHVREIQPKECHREYLPSSNLCLFDIVRR 1361 QKC G A+ R+ R RP G+RVLLAYQWRS+RTG ALLEEL F VREI P+ECH +YLPS+NLCL + VRR Sbjct: 89 QKCEGGGRAA--RSVGR-SRPSAGRRVLLAYQWRSERTGRALLEELGACFRVREIPPEECHPDYLPSTNLCLLEAVRR 163
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: W4GN74_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GN74_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.230e-15 Identity = 69/232 (29.74%), Postives = 93/232 (40.09%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994 V N+ +GTGL WDGSV+L KYLEH + ++ D+ R + RVLELG GTGL GLAAA V V LTDL Y LDN ANV NASS+ A ++V+ ELDW + P L D+ D+++ +D+VW++ L++ LV T+ L Sbjct: 122 VGNTGKGTGLTIWDGSVVLAKYLEHATSSFVQNEDSVRGK--------------------------------------RVLELGAGTGLVGLAAA-----------------------------------VCGASHVTLTDLAYTLDNLSANVRANASSIAA--TSVDVAELDWFKAAPLSLT---------------------DNVDVVVGSDIVWVESLIDALVATIASL 257
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A8K1CNV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV0_PYTOL) HSP 1 Score: 85.1 bits (209), Expect = 2.790e-14 Identity = 71/232 (30.60%), Postives = 90/232 (38.79%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994 V NS GTGL TWDGS++L KYLEH F + HG RVLE+G GTGL G++A +V+LTDL Y +DN NV + + + V +ELDW +P DL GD FDLILA+DVVW++ELV PLV+TL+ L Sbjct: 129 VENSGLGTGLTTWDGSIVLAKYLEHR-----------------------FGNGQLHGK--------------------RVLEVGAGTGLVGISAGLL-----------------------------------GAEQVLLTDLAYTMDNLARNVELTGQHAQQIKARVQPVELDWFQPR-SDL---------------------GD-FDLILASDVVWVEELVRPLVQTLQTL 259
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A448ZF24_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZF24_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.700e-13 Identity = 73/238 (30.67%), Postives = 95/238 (39.92%), Query Frame = 2 Query: 302 SNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNA---SSLKAVGSTVNAMELDWCRPPPDD----LFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994 SNS GTG WDG+V L +L HH R + D R SLS E RVLELG GTGL G+AA + V++TDLEY++ N AN+ N +S + ST++A LDWC P + ++ +P PP D++LAADVVW+D LV PLV TL R+ Sbjct: 174 SNSGLGTGTNLWDGAVALASFLGHHQGTARSNKDKDNDRDP--------------------------SLSVEGK---RVLELGAGTGLVGIAAHLAL----------------------------------GASRVLVTDLEYSMANLEANLSANRCHRTSAERRDSTIDARVLDWCDPSSCETALSIWNESGGAHSHSPPPP----------DVVLAADVVWVDFLVPPLVETLRRV 338
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A5D6YJY0_9STRA (GLTP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJY0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.640e-13 Identity = 74/235 (31.49%), Postives = 90/235 (38.30%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAME---LDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994 V NS +GTGL TWDGSV+L K+LEH R GK RVLE+G GTGLAGL+AA R EVVLTDL Y ++N N ++ + G V A+ LDW PP D VG + D +LAADVVW++EL+ PLVRTL L Sbjct: 158 VGNSGKGTGLTTWDGSVVLAKHLEHARAGELR--------------------------------GK------------RVLEVGAGTGLAGLSAALLGAR-----------------------------------EVVLTDLAYTMENLAGNAAHTLANARHAGVAVGAVHTQVLDWFAPPTD------------------VG-----ALDFVLAADVVWVEELIAPLVRTLATL 290
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A0P1AN60_PLAHL (Putative N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN60_PLAHL) HSP 1 Score: 81.6 bits (200), Expect = 5.360e-13 Identity = 66/236 (27.97%), Postives = 84/236 (35.59%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNA----MELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994 + NS +GTGL TWDGSV+L KYLEH RRD RV+ELG GTGL G+AAA + +V+L+DL Y +DN NV AVG + ELDW PP D D +LA+DVVW++ L+ PLV+T + L Sbjct: 144 IGNSGKGTGLITWDGSVVLAKYLEHER---RRDIAGS-----------------------------------------RVVELGAGTGLVGIAAALLGAK-----------------------------------QVILSDLSYVIDNLAKNVAETKKLADAVGKPIQCDILTQELDWFNPPTDLK-----------------------DIDFVLASDVVWIESLIPPLVKTFDTL 277
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A418B4Q7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B4Q7_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 7.340e-13 Identity = 66/235 (28.09%), Postives = 90/235 (38.30%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERLTAG 1003 V N+ +GTGL WDGSV+L +YLEH ++++ D DN R + RVLELG GTGL GLAA+ C V LTDL YAL+N NV N ++ V+ ELDW P D D+++ +D+VW++ L+EPLV+T+ L G Sbjct: 149 VGNTGKGTGLTIWDGSVVLARYLEHVSLSVGHD-DNVRGK--------------------------------------RVLELGAGTGLVGLAASL-------------------C----------------GASHVTLTDLAYALENLSRNVELNRGAISPAAVAVS--ELDWFAPQSSSFT---------------------DGVDMVVGSDIVWVESLIEPLVQTIAVLLKG 286
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Match: A0A662YK58_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YK58_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 8.860e-13 Identity = 71/236 (30.08%), Postives = 88/236 (37.29%), Query Frame = 2 Query: 299 VSNSSEGTGLFTWDGSVLLTKYLEHHAVAMRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRVLELGCGTGLAGLAAAFSFRRRESGDNDSESQAAFPCRYRPSSEYPSSPTTVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTV----NAMELDWCRPPPDDLFQNCRSPKRPNPLPPFVGCAGGDSFDLILAADVVWLDELVEPLVRTLERL 994 V NS +GTGL TWDGSV+L KYLEH RRD RV+ELG GTGL G++AA R EV+LTDL+Y +DN NV + L G V + LDW PP DDL + D +LA+DVVW++EL+ PLV T + L Sbjct: 167 VGNSGQGTGLTTWDGSVVLAKYLEHQR---RRDIAGS-----------------------------------------RVVELGSGTGLVGISAALLGAR-----------------------------------EVILTDLDYVVDNLAKNVAQTLQLLANEGGKVECKVSTQILDWFSPP-DDL----------------------GNIDFLLASDVVWVEELIPPLVTTFDVL 300 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6066.14603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6066.14603.1 >prot_L-elsbetiae_contig6066.14603.1 ID=prot_L-elsbetiae_contig6066.14603.1|Name=mRNA_L-elsbetiae_contig6066.14603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp MRRDFDNQRSRCQTRPTPTTFEGAESHGGVINPTGGKTNSLSKETPALVRback to top mRNA from alignment at L-elsbetiae_contig6066:5771..9290- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6066.14603.1 ID=mRNA_L-elsbetiae_contig6066.14603.1|Name=mRNA_L-elsbetiae_contig6066.14603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3520bp|location=Sequence derived from alignment at L-elsbetiae_contig6066:5771..9290- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6066:5771..9290- >mRNA_L-elsbetiae_contig6066.14603.1 ID=mRNA_L-elsbetiae_contig6066.14603.1|Name=mRNA_L-elsbetiae_contig6066.14603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig6066:5771..9290- (Laminarionema elsbetiae ELsaHSoW15)back to top |