prot_L-elsbetiae_contig6065.14600.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6065.14600.1
Unique Name	prot_L-elsbetiae_contig6065.14600.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	102

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A6H5KLJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLJ2_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 7.400e-65
Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQ---SIGGPDEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RDFTGAVTLLEFNRRSGED+TLEDTLMWLGYC+FHLGNYQRAI+AYQ   S+GG DEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL
Sbjct:   11 RDFTGAVTLLEFNRRSGEDETLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 115

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: D8LBC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBC6_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 6.260e-62
Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQ---SIGGPDEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYC+FHLGNYQRAI+AYQ   S+GG DEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL
Sbjct:   28 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 132

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A836CHL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.160e-37
Identity = 61/106 (57.55%), Postives = 84/106 (79.25%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSI----GGPDEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RD+TGA+ LLEFNRRSG+DD LED L+W+GYC+FH+G YQRA++AY+ +     G  +V L++ACC+YY+Q +D+AEEAA +GP+  L+ RLL H++HK  DE KL
Sbjct:   40 RDYTGALALLEFNRRSGDDDNLEDMLLWIGYCAFHVGRYQRALEAYEEVVAIGAGGGDVHLYVACCHYYLQSYDQAEEAASRGPKGPLRTRLLLHIAHKQNDERKL 145

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A4P9W5C2_9FUNG (Uncharacterized protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W5C2_9FUNG)

HSP 1 Score: 118 bits (295), Expect = 8.530e-32
Identity = 54/106 (50.94%), Postives = 80/106 (75.47%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSI---GGPDEVT-LFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RD+TGA+TLLEFN+ +G+ D   D ++WLGY +FHLG+Y++A++AYQ       PD +  LFLAC ++++ M+ +A+E A++GP C L+NRLLFH+SHK  DE +L
Sbjct:   39 RDYTGAITLLEFNKATGKYDA--DNMLWLGYSAFHLGDYKKAMEAYQGFLQEANPDPLGHLFLACTFFFLGMYKEADEEAQRGPTCKLQNRLLFHLSHKFNDEKRL 142

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A6P8PLB5_GEOSA (Intraflagellar transport protein 56 n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8PLB5_GEOSA)

HSP 1 Score: 121 bits (303), Expect = 9.370e-32
Identity = 60/107 (56.07%), Postives = 80/107 (74.77%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSIG-----GPDEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RDFTGA+TLLEF R+ GE D  ED+ MW+GYCSFHLG+Y+R+++ Y+SI       PD V + LAC Y+++ M+ +AEEAA K P+  L+NRLLFH++HK  DE KL
Sbjct:   37 RDFTGAITLLEFKRQLGEGD--EDSDMWIGYCSFHLGDYKRSMEEYESISKREVCNPD-VWVNLACTYFFLGMYKEAEEAATKAPKSRLQNRLLFHLAHKFNDEKKL 140

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A482SUH5_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUH5_9ARCH)

HSP 1 Score: 118 bits (295), Expect = 2.300e-31
Identity = 54/106 (50.94%), Postives = 80/106 (75.47%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSIGGPDEVT----LFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RD+TGA+TLLEF R   +D  ++D L+W+GYC+FHLGNY+RA +AY+ +    +V     LF+ACCY++ QM+++AE  A K PE  LK+R+LF+++H++ DENKL
Sbjct:   39 RDYTGALTLLEF-RLKCQDGDVKDLLLWIGYCAFHLGNYRRAEEAYRELLNAHDVGRILHLFIACCYFFQQMYEEAEREADKAPEDPLKSRILFNIAHRVGDENKL 143

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A0L0HE99_SPIPD (Tetratricopeptide repeat protein 26 n=3 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HE99_SPIPD)

HSP 1 Score: 120 bits (301), Expect = 9.020e-30
Identity = 55/106 (51.89%), Postives = 79/106 (74.53%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSIGGPDE----VTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RDFTGA+TLLEFN  +G+ D  +DTL WLGY +FHL +Y++A++ YQ++    +    V L+L CCY+++ M+ +A+E A+KGP C L+NRLLFH+SHK  DE +L
Sbjct:   39 RDFTGAITLLEFNAAAGKQD--QDTLAWLGYAAFHLSDYKKAMETYQAMLQDPKCDPLVHLYLGCCYFFLGMYREADEEAQKGPTCKLQNRLLFHLSHKFNDEKRL 142

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A2R5G680_9STRA (Intraflagellar transport protein 56 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G680_9STRA)

HSP 1 Score: 120 bits (301), Expect = 9.270e-30
Identity = 56/106 (52.83%), Postives = 79/106 (74.53%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSI----GGPDEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RD+TGA+ LLEFN+ +  DD   ++ MWLGYC+ HLG+Y++A++A+Q +        EV L+LA C Y++QM+D+AEE A +GP C L+NRLLFH++HK  DENKL
Sbjct:   40 RDYTGAIALLEFNQHA--DDFDAESCMWLGYCAAHLGDYKKALEAFQDLQRLGDTGKEVHLYLAICMYFLQMYDEAEEEALQGPTCGLQNRLLFHIAHKQNDENKL 143

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: UPI001CC554A2 (intraflagellar transport protein 56 isoform X4 n=2 Tax=Metatheria TaxID=9263 RepID=UPI001CC554A2)

HSP 1 Score: 117 bits (292), Expect = 1.330e-29
Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSI----GGPDEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RDFTGA+TLLEF R  GE D  ED  +W+GYC+FHLG+Y+RA++ Y+S+    G   EV + LAC Y+++ M+ +AE A  K P+  L+NRLLFH++HK  DE KL
Sbjct:   44 RDFTGAITLLEFKRHVGEQD--EDADLWIGYCAFHLGDYKRALEEYESVTKEEGCNPEVWVNLACTYFFLGMYKQAETAGFKAPKSRLQNRLLFHLAHKFNDEKKL 147

[Close]

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Match: A0A7J8HDY6_MOLMO (Intraflagellar transport protein 56 n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8HDY6_MOLMO)

HSP 1 Score: 114 bits (284), Expect = 1.580e-29
Identity = 54/106 (50.94%), Postives = 76/106 (71.70%), Query Frame = 0

Query:    1 RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSIGGPD----EVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKL 102
            RDFTGA+TLLEF R  GE +  EDT +W+GYC+FHLG+Y+RA++ Y++    +    EV + LAC Y+++ M+ +AE A  K P+  L+NRLLFH++HK  DE KL
Sbjct:   37 RDFTGAITLLEFKRHVGEQE--EDTNLWIGYCAFHLGDYKRALEEYENATKEENCNPEVWVNLACTYFFLGMYKQAEAAGFKAPKSRLQNRLLFHLAHKFNDEKKL 140

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6065.14600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KLJ2_9PHAE	7.400e-65	92.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LBC6_ECTSI	6.260e-62	93.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CHL9_9STRA	1.160e-37	57.55	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A4P9W5C2_9FUNG	8.530e-32	50.94	Uncharacterized protein n=1 Tax=Blyttiomyces helic...	[more]
A0A6P8PLB5_GEOSA	9.370e-32	56.07	Intraflagellar transport protein 56 n=1 Tax=Geotry...	[more]
A0A482SUH5_9ARCH	2.300e-31	50.94	Tetratricopeptide repeat protein n=1 Tax=archaeon ...	[more]
A0A0L0HE99_SPIPD	9.020e-30	51.89	Tetratricopeptide repeat protein 26 n=3 Tax=Spizel...	[more]
A0A2R5G680_9STRA	9.270e-30	52.83	Intraflagellar transport protein 56 n=1 Tax=Hondae...	[more]
UPI001CC554A2	1.330e-29	52.83	intraflagellar transport protein 56 isoform X4 n=2...	[more]
A0A7J8HDY6_MOLMO	1.580e-29	50.94	Intraflagellar transport protein 56 n=1 Tax=Moloss...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..100 e-value: 3.5E-9 score: 38.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 9..88
IPR030511	Tetratricopeptide repeat protein 26	PANTHER	PTHR14781	UNCHARACTERIZED	coord: 1..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6065	contig	L-elsbetiae_contig6065:3927..4988 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6065.14600.1	mRNA_L-elsbetiae_contig6065.14600.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6065 3927..4988 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6065.14600.1 ID=prot_L-elsbetiae_contig6065.14600.1|Name=mRNA_L-elsbetiae_contig6065.14600.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
RDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCSFHLGNYQRAIDAYQSIG
GPDEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDEN
KL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR030511	TTC26