prot_L-elsbetiae_contig6054.14592.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6054.14592.1
Unique Nameprot_L-elsbetiae_contig6054.14592.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length429
Homology
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BLAST of mRNA_L-elsbetiae_contig6054.14592.1 vs. uniprot
Match: A0A6H5JTI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI4_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 7.430e-27
Identity = 73/130 (56.15%), Postives = 94/130 (72.31%), Query Frame = 0 
Query:  309 YSSIRVLTPTDGDVLVLDSDFEVTWAVDDGDGSNST-LFHVDLYDCGDDQSCLGANGSVCGA--GEFVV-GLCPEEGCYSTVSTAS----ISLPEVDD-VGPYFKVAVSPDDGSSATGCSSGVFTTTAAA 429
            +SSI+VL P+DG+VL+ +S +EVTWAVD  +GS+S  +FHVDL+DCGD+Q+C   +G   G   GE +V  LCPEEGCYS          ++LP+VDD +GPYFK+AVSPDDGS+  GCS G FT  AAA
Sbjct:  152 FSSIQVLRPSDGEVLISESSYEVTWAVDGEEGSSSPDVFHVDLHDCGDNQACGSGSGXXDGGCVGEGLVQALCPEEGCYSDGGGGGGVTWVTLPKVDDGLGPYFKIAVSPDDGSNDPGCS-GSFTIEAAA 280
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6054.14592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JTI4_9PHAE7.430e-2756.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 284..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..429
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.739

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6054contigL-elsbetiae_contig6054:7665..9918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6054.14592.1mRNA_L-elsbetiae_contig6054.14592.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6054 7428..9918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6054.14592.1 ID=prot_L-elsbetiae_contig6054.14592.1|Name=mRNA_L-elsbetiae_contig6054.14592.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=429bp
MKHPRPLGLAVVCALSVGAAAAQADDAAPRWRWERNRSAGAERLAETAGV
LPRGQQRQRQRESHRERTGEPNHNVRRLVKETATATPTPAHSGATVAPTA
ISTAVAVATASASTSATVTHYSASSSATATFTTTDVGGETEIDSEQGGED
SNEDQAARDNEVESGDTDGEDEDDDTTHGDDDGSESEGGGKSDDGDDGGD
DDGDDGAGDGGDDNGDGRPVDVDDGDDDPGSEGDERVDDDDGGEAGDDGD
GGGGGGDGGDREEDEKKPEDDGGGGDGGDGDEGEEELEEEKKFEEEEELE
ERESHEIRYSSIRVLTPTDGDVLVLDSDFEVTWAVDDGDGSNSTLFHVDL
YDCGDDQSCLGANGSVCGAGEFVVGLCPEEGCYSTVSTASISLPEVDDVG
PYFKVAVSPDDGSSATGCSSGVFTTTAAA
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