prot_L-elsbetiae_contig6047.14587.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6047.14587.1
Unique Nameprot_L-elsbetiae_contig6047.14587.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length347
Homology
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: D7FI14_ECTSI (SF3b1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI14_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 1.600e-145
Identity = 281/351 (80.06%), Postives = 286/351 (81.48%), Query Frame = 0
Query:    1 MANVDEEIKALQKERESGIVAAADAEGDAEKEEGGDDADGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDQKRRWDDG-TPVAARGGXXXXXXXXXETPAAGRAAVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVARRSSRWDQSGG--VTPVAGGVTPGLTPGGVGDTPKAGSKWDDXXXXXXXXXXXXX-PSGRKKSRWDQVSLAFVCP 347
            MANVDEEIKALQKERESGIVA AD E D           GQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRAS+NAPRHLLDGGE        + TIAGMRAGGSGMVNTVIAERESAYQAKGRR+QMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKD KRRWDDG TPVA  GG         ETPA G+  VSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPV RRSSRWDQSGG  VTP+AGGVTPG    GVGDTPKAGSKWDD              PSGRKKSRWDQ   A V P
Sbjct:    1 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVA--GGVADGD----ETPAVGK-IVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPG----GVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTP 340          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 1.430e-127
Identity = 278/413 (67.31%), Postives = 284/413 (68.77%), Query Frame = 0
Query:    1 MANVDEEIKALQKERESGIVAAADAEGDAEKEEGGDDADGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDQKRR--------------------------------------------------------------WDDG-TPVAARGGXXXXXXXXXETPAAGRAAVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVARRSSRWDQSGG--VTPVAGGVTPGLTPGGVGDTPKAGSKWDDXXXXXXXXXXXXX-PSGRKKSRWDQVSLAFVCP 347
            MANVDEEIKALQKERESGIVAAAD E D           GQVALTGAGAYDRDIYGGGGDKFAGVSRTVV XXXXXXXXXXXXXXXXXXXXSHPASRAS+NAPRHLLDGGE        + TIAGMRAGGSGMVNTVIAERESAYQAKGRR+QMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKD   R                                                              WDDG TPVA  GG         ETPA G+  VSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPV RRSSRWDQSGG  VTP+AGG+TPG    GVGDTPKAGSKWDD              PSGRKKSRWDQ   A V P
Sbjct:    1 MANVDEEIKALQKERESGIVAAADGEDDGGDXXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVEXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVIMRKAAKQAEEAASLKRSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDDGGTPVA--GGVADGD----ETPAVGK-IVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGITPG----GVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTP 402          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A835Z3L3_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 7.370e-16
Identity = 59/148 (39.86%), Postives = 83/148 (56.08%), Query Frame = 0
Query:   41 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDQ 188
            +V L   G +D DIYGGG DKFAG S  +V                     SHP++R +I A      GGE        D       +GGSG+VNT I++RE+ Y A+ RR++++SP RG DAF+G+TP RS++DIM  Q L ++K++
Sbjct:   32 KVGLLSVGGFDTDIYGGG-DKFAGFSSAIVDEQEEADGDTEVISHIGAA--SHPSTRMAIPAKALEAAGGEDAS-----DPFAQYRESGGSGLVNTRISDRETDYHAR-RRNRLLSPDRG-DAFSGKTPARSYKDIMINQDLDRQKEE 169          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A7S2D4K5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4K5_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.090e-15
Identity = 70/185 (37.84%), Postives = 90/185 (48.65%), Query Frame = 0
Query:    4 VDEEIKALQKERESGIVAAADAEGDAEKEEGGDDADGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDQ 188
            ++ +I+ LQ+ R +G    A  E D E E G      +V LT  GA+D D+YG   DK                              +HPA+RASINA + LL+ G                    SGMVNT IA+RES YQ KGR+ + ISP RG D F+G TP RS++DIM  Q L KE+ Q
Sbjct:   11 METQIRELQQSRAAG---EAGQEEDNEAEPGE-----RVGLTSKGAFDSDLYGA--DK------------PFHTEIEDIAPDADDEAGNHPATRASINASKGLLEQGTDADTGIDPFAAYKEQ----SGMVNTRIADRESEYQKKGRQGRFISPARG-DVFSGTTPARSYKDIMTAQNLEKEEAQ 168          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A662WMW2_9STRA (SF3b1 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMW2_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.390e-14
Identity = 57/145 (39.31%), Postives = 77/145 (53.10%), Query Frame = 0
Query:   42 VALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK 186
            VALT AGA+D++IYG GGD+FAG S T+                         ASR++    +    GG+        D       A GSG+VNT I +RE++Y+ K R  +M+SP RG DAF G+TP RS++DIM  Q L  E+
Sbjct:   38 VALTAAGAFDQEIYGAGGDRFAGYSATIADEGDDAEEKEGDETA---------ASRSTTTTNKVATQGGDGLIDDSY-DPFAEAREANGSGLVNTRIVDRENSYR-KRRFDRMLSPERG-DAFGGKTPARSYKDIMQGQQLDMER 170          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A8K1FMX0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMX0_PYTOL)

HSP 1 Score: 77.4 bits (189), Expect = 8.610e-12
Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 0
Query:   41 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKD 187
            +V L+  G +D+DIYGGGGDK+AG S  VV                        A++ + N    L+D G         D         GSG+VNT I +RE+ Y+ K R  +M+SP RG D F G+TP RS++D+M  Q L  E++
Sbjct:   10 KVGLSSTGHFDQDIYGGGGDKYAGFSTAVVDEDDDEAAELATLRKGRGF-----AAKGNGNPEDGLIDEGH--------DPFATARAENGSGLVNTRIVDRENDYR-KRRFDRMLSPERG-DTFDGKTPQRSYKDVMQSQRLEAERN 141          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A7S3RUZ3_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RUZ3_EMIHU)

HSP 1 Score: 60.5 bits (145), Expect = 1.160e-6
Identity = 58/178 (32.58%), Postives = 79/178 (44.38%), Query Frame = 0
Query:   95 ASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFA---GQTPTRSFRDIMAEQALAKEKDQ------------------KRRWDDGTPVAARGGXXXXXXXXXETPAAGRAAVSDWDADVATPVRSSRGFGGGETPGRTPGG 251
            A R+S  AP+HLL   E        D  ++          +  IA+RE  Y A  RR +++SP R  D FA   G +  RS+RD+MAE  +A++KD+                  +RRWD   P A   G          + AAG+   + WD DVATP      +    TPGR  GG
Sbjct:   55 AKRSSFTAPKHLL---EAVPQQPEDDDPMS--------QRSNRIADREDEYHA--RRQRVLSPSRA-DPFAKGAGGSSERSYRDVMAEADIARQKDEIRRKLAEQSEEGATGVKKRRRWD--APAAGDAGA---------SAAAGKKQATRWD-DVATPAPVGSKWDSTPTPGRDAGG 206          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A2D4C3T6_PYTIN (Splicing factor 3B subunit 1 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3T6_PYTIN)

HSP 1 Score: 61.6 bits (148), Expect = 1.250e-6
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 0
Query:  128 AGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DQKRRWDDGTPVAARGGXXXXXXXXXETPAAGRAA 221
            A GSG+VNT IA+RE+ Y+ K R  +M+SP RG DAFAG+TP RS+++IM +Q L  E+ D  R+      +A   G         + P+AG AA
Sbjct:   67 ANGSGLVNTRIADRENDYR-KRRFDRMLSPERG-DAFAGETPQRSYKEIMQQQRLDSERRDVIRQIQKKQQLADERGDAASADSATDRPSAGSAA 159          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: A0A7S3ZMT2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMT2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.580e-6
Identity = 51/177 (28.81%), Postives = 73/177 (41.24%), Query Frame = 0
Query:   42 VALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASINAPRHLLDGGEXXXXXXXXDGTIAGMRAGGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKD---------------QKRRWDDGTPVAARGG 203
            +    +G +DRD+YGG      G+SR +V                      HP+++  +  P    DG +        +              N  IAERESAYQAKGR ++ +SP R  D FA  TP R FR+ M    + +E+D               +KRR+DD     A+ G
Sbjct:   23 LGAAASGEFDRDLYGGA----KGLSREIVDEPTQDDDGGGGL---------HPSTQRDLRGPADEDDGEDPFKAHRDRN------------PANIPIAERESAYQAKGRATRELSPERQ-DPFADATPARGFREAMGSNVVDRERDDLLKKIAENEDDKGGKKRRFDDAGDKPAKEG 173          
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Match: UPI000711D3D4 (splicing factor 3b subunit 1 n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711D3D4)

HSP 1 Score: 60.5 bits (145), Expect = 2.710e-6
Identity = 66/177 (37.29%), Postives = 93/177 (52.54%), Query Frame = 0
Query:  129 GGSGMVNTVIAERESAYQAKGRRSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDQKRRWDDGTPVAARGGXXXXXXXXXETPAAGRAAVSDWDA--DVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVARRSSRWDQS------GGVTPVAGGVTPG 297
            GGSG+VNT IA+RES YQ + R  +M+SP R  D +    P R ++++M E+ L +E+ +  +      +  +     X      + A+    VS  D+  D  TP R S     GETP R+    XXXXXX   DQ   +   +TP A+RS RWD++      G  TP +GGVTPG
Sbjct:  101 GGSGLVNTRIADRESDYQRQ-RIKRMLSPERS-DPYKDSEPVRGYKEVMREKLLDEEESRVYK-----QILEKQQEEQXRQSQKRSEASTDKTVSSTDSVWDAPTPTRGSEV---GETPSRSK--WXXXXXXXXXDQG-EKTIGDTPGAKRS-RWDETPVSRAFGTSTPGSGGVTPG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6047.14587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FI14_ECTSI1.600e-14580.06SF3b1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JJ74_9PHAE1.430e-12767.31TOG domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z3L3_9STRA7.370e-1639.86Splicing factor 3B subunit 1 n=1 Tax=Tribonema min... [more]
A0A7S2D4K5_9STRA1.090e-1537.84Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A662WMW2_9STRA1.390e-1439.31SF3b1 domain-containing protein n=2 Tax=Nothophyto... [more]
A0A8K1FMX0_PYTOL8.610e-1236.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3RUZ3_EMIHU1.160e-632.58Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A2D4C3T6_PYTIN1.250e-644.21Splicing factor 3B subunit 1 n=2 Tax=Pythium insid... [more]
A0A7S3ZMT2_9STRA1.580e-628.81Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
UPI000711D3D42.710e-637.29splicing factor 3b subunit 1 n=1 Tax=Blastocystis ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6047contigL-elsbetiae_contig6047:6105..11080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6047.14587.1mRNA_L-elsbetiae_contig6047.14587.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6047 5927..11080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6047.14587.1 ID=prot_L-elsbetiae_contig6047.14587.1|Name=mRNA_L-elsbetiae_contig6047.14587.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
MANVDEEIKALQKERESGIVAAADAEGDAEKEEGGDDADGQVALTGAGAY
DRDIYGGGGDKFAGVSRTVVEEEEPEEDEDEVVTHRGGGGASHPASRASI
NAPRHLLDGGEEREGGGDDDGTIAGMRAGGSGMVNTVIAERESAYQAKGR
RSQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDQKRRWDDGTPVAA
RGGGGGGDGDGDETPAAGRAAVSDWDADVATPVRSSRGFGGGETPGRTPG
GGGETPGRSRWDQTPSRDAQETPVARRSSRWDQSGGVTPVAGGVTPGLTP
GGVGDTPKAGSKWDDETPRAGGFGAGETPSGRKKSRWDQVSLAFVCP
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