mRNA_L-elsbetiae_contig603.14562.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: D8LJ20_ECTSI (Mitochondrial carrier protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ20_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 5.350e-128 Identity = 206/311 (66.24%), Postives = 238/311 (76.53%), Query Frame = 1 Query: 223 SLQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQ----------LSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHLGV-AMSAPAAATANVKREQ 1122 SL+SARPHL A AVAR SI+ GYPLDTIKTRLHLGR+ S+PD+YRGLGSSL GQVPYGMLTFGTYELYKTALL RFP++P+A+TFC AA+LGDMTGSLWLVPSEVVKVQMQGG+H+++ +A +SIF+++G GGFYQGFSGQ+GRDVPFRA+QLTSYELLR +L R + LSSGDAAL+GG+AGAISATFTCPLDV+RTRLMVGG GG A+ W AIKAG L SGLGTRV Y+GTSSAVFFVVYEA+K LGV A S+P AAT+ KR+Q Sbjct: 45 SLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLKTWRRRQHTGVATERGDDSGGVPVGRARGGVATAAAGDDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAETWAAAIKAGGLLSGLGTRVFYIGTSSAVFFVVYEAIKVRLGVVAASSPPAATSKAKRQQ 355
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S1BAX9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAX9_9STRA) HSP 1 Score: 221 bits (564), Expect = 8.230e-62 Identity = 134/289 (46.37%), Postives = 165/289 (57.09%), Query Frame = 1 Query: 235 ARPHLAAGAVARFFSISVGYPLDTIKTRLHLGR--------SFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGS--GGGAKNWRGAIKAGS----LFSGLGTRVLYVGTSSAVFFVVYEAVK 1059 AR HLAA AVAR SI V YP+DT+KTR+ +G F + + +Y+GL SLVGQVPYG+LTFG+YE+YK A L R P P A+ + AAILGD TGS WL PSEVVK Q+QGG+HSS A I+ R GFGGFYQG+ G L RDVPFR QLTSYE+ + + + +LSS DAA+ G VAG SA T PLD ++T LM G+ N I LFSG+ RV Y+ S A+FF+VYE V+ Sbjct: 103 ARKHLAAAAVARAVSIFVMYPVDTVKTRIQMGEPILGGVGTKFSIAAA-GMYKGLDGSLVGQVPYGVLTFGSYEVYKQAFLKRLPAAPPALLYAFAAILGDTTGSFWLCPSEVVKQQIQGGMHSSTLAAARDIYSRQGFGGFYQGYFGGLARDVPFRVAQLTSYEVAKSVYLRMKTRKRRETEPEGER--------------KVELSSIDAAICGAVAGTFSAGITAPLDRIKTLLMTDGAKYSNSVANCASTIFKNEGVTGLFSGIVPRVAYIAPSVALFFIVYERVQ 376
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S2SIM3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIM3_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.210e-59 Identity = 126/288 (43.75%), Postives = 170/288 (59.03%), Query Frame = 1 Query: 226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGG-------AKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068 ++ AR HLAA AVAR SI YP+DT+KTR+ + + + L LY G+G SLVGQVPYG+LTFG+YE+YK LL +FP+V + +A+LGD+TGS WL PSEVVK +MQ G++S+ +A I K+ GFGGFY+G+ G L RDVPFR QLTSYE+ +K+ + + +LS G++A VG +AG+ SA T PLD ++T LM + G AK WR AG GL RV+Y+ S +FF+ YE V+ L Sbjct: 56 IKDARRHLAAAAVARATSIFTMYPMDTMKTRIQMEQPNAL-RLKGLYSGVGGSLVGQVPYGVLTFGSYEVYKNTLLEKFPDVRPVFLYAISAVLGDVTGSGWLCPSEVVKQKMQAGMYSTTGEAIREIIKKKGFGGFYEGYFGGLARDVPFRVAQLTSYEVSKKIFLQMKRKKQQQNEGESSSIE------------NLRLSPGESAAVGAMAGSFSAAITSPLDRIKTLLMTDSAAYGGSVASCAAKIWREEGIAG-FCQGLVPRVIYIAPSVMIFFIAYEQVQQRL 329
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S2K4Y9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4Y9_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.750e-56 Identity = 118/266 (44.36%), Postives = 156/266 (58.65%), Query Frame = 1 Query: 238 RPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVP-SLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGS--GGGAKNWRGAIK----AGSLFSGLGTRVLYV 1014 R HLAA A AR SI YP+DT+KTR+ +G +F+ + +G+ SLVGQVPYG+LTFG+YE+YK LL +FP V + AAILGD+TGS W+ PSEV+K QMQ G++ + A SI+ ++G GGFYQG+ G L RDVPFR QLTSYE+ +K+ N R +LS+ D+A+VG VAG SA T PLD ++T LM GS GG +I G LF+G+ RV+Y+ Sbjct: 26 RGHLAAAAAARCTSIFTMYPIDTLKTRMQMGNTFKESVQKGGIMKGVSGSLVGQVPYGVLTFGSYEVYKEMLLKKFPNVRPVFIYAMAAILGDVTGSGWVCPSEVIKQQMQAGMYPTTGDAIRSIWSKSGLGGFYQGYMGGLARDVPFRVAQLTSYEVAKKVFLNYRKRQDESVK---------------------ELSAVDSAVVGAVAGTFSAAITAPLDKIKTLLMTEGSKYGGSVMQCASSIVQAEGVGGLFAGVVPRVVYI 270
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S0C337_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C337_9STRA) HSP 1 Score: 199 bits (506), Expect = 9.140e-54 Identity = 117/284 (41.20%), Postives = 159/284 (55.99%), Query Frame = 1 Query: 226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKA------GSLFSGLGTRVLYVGTSSAVFFVVYEAVK 1059 L+ +R +L A AVAR SI YP+DTIKTR+ +G+ + +Y+G+G SL GQVPYG+LTFG+YE+YK LL +FPE +V + AA+LGD+TGS WL PSEVVK Q+QGG+++S +A +I+ G GGFYQG+ G L RDVPFR QLTS+E+ + + LS+ ++A VG V G SA T PLD ++T LM + G A K +F G+ RV Y+ S +FF YE V+ Sbjct: 91 LKESRKYLVAAAVARSVSIFGMYPVDTIKTRMQMGQPMGLRD--GIYKGVGGSLFGQVPYGVLTFGSYEIYKKKLLEKFPETSPSVLYAFAAVLGDITGSGWLCPSEVVKQQLQGGMYTSTREAVSAIWSTKGIGGFYQGYIGGLARDVPFRVCQLTSFEVTKNSYLRLKRKRSGMSEDA-----------------ELTLSAAESAAVGAVCGTFSAAVTTPLDRIKTLLMTDSANYGGTVISCATKIIKDEGISGMFKGIVPRVAYIAPSVVIFFTAYEQVQ 355
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S1GKZ5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKZ5_CYCTE) HSP 1 Score: 196 bits (497), Expect = 3.980e-53 Identity = 118/291 (40.55%), Postives = 161/291 (55.33%), Query Frame = 1 Query: 226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKM---LGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGG-------AKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068 ++ AR HL A VAR SI YP+DTIKTR+ + + + L LY G+ SL GQVPYG+LTFG+YE+YK AL +FP + + + AAILGD+TGS WL PSEVVK QMQ G+ ++ +A +I+++ G G YQG+ G + RDVPFR QLTSYEL + + + RR +LS+ DAA G ++G SA T PLD ++T LM + G +K W AG +GL RV Y+ S +FF+ YE V+ + Sbjct: 28 IKEARRHLTAAGVARSVSIFAMYPIDTIKTRMQMDQPNPL-RLNGLYNGVAGSLFGQVPYGVLTFGSYEMYKKALTDKFPSIRPVLVYALAAILGDLTGSFWLCPSEVVKQQMQAGMFATTGEAIRAIWQKQGLAGLYQGYLGGVARDVPFRVAQLTSYELTKSLYLRIKKRRLPQQKGKKAVAP---------------KLELSAFDAAACGALSGTFSAAITTPLDRIKTLLMTNSAAYGGSVLSCASKIWSDEGVAG-FTAGLLPRVTYIAPSVVIFFIAYEQVQQRM 301
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A5J4YTC7_PORPP (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTC7_PORPP) HSP 1 Score: 196 bits (498), Expect = 1.730e-52 Identity = 120/313 (38.34%), Postives = 170/313 (54.31%), Query Frame = 1 Query: 226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHL---GRSFRVPSLPD------LYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKA----------GSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHLGVAMSA--PAAAT 1101 ++ AR HLAAG VAR S+ V +P+D+IKTRL G + ++ ++ G+G SL GQ+PYGMLTFG YE YK L +FP +P + A LGD+TGSLWL P+E +K +Q G+H S+ +A +K G GFYQG+SGQ+GRDVPFR +QL+ YE ++ M + + D ++G +AG+IS+ T PLDV++TRLM GG A+ ++ A+ G L G+ RV+Y+ S A+FF VYEA + +A P+AAT Sbjct: 43 VRDARDHLAAGGVARGVSVLVMHPVDSIKTRLQAAAPGAGAPIDAVKAFLASGRVFAGVGISLFGQIPYGMLTFGAYEAYKEVLAQKFPAMPSELRVMLGACLGDLTGSLWLCPAERIKQTLQSGVHGSVLEAVRKTYKNGGLPGFYQGYSGQIGRDVPFRIIQLSVYEKIKAMYARAYLKER-------------------------EAVTTDNLIIGALAGSISSVLTAPLDVIKTRLMTD-QGGSARVYKNALDCVVKIVRAEGPGVLARGVVPRVIYITPSVAIFFAVYEATLRFIRNRRAAADPSAAT 329
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A1Z5K5K0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5K0_FISSO) HSP 1 Score: 194 bits (494), Expect = 3.100e-52 Identity = 117/293 (39.93%), Postives = 165/293 (56.31%), Query Frame = 1 Query: 226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRS--FRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKM---LGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGG-------AKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068 ++ +R L A A AR SI YP+DT+KTRL + ++ FR L LY+G+ SL+GQVPYG+LTFG+YE+YK ALL +FP + + +A+LGD+TGS WL PSEV+K Q Q G++ S ++A + I ++ G G YQG+ G + RDVPFR QLTSYE+ + + +RR QL + ++A+ G +AG+ SA T PLD +T LM + G +K WR AG G+ RV Y+ S A+FF+VYE V+ L Sbjct: 71 IRDSRRDLLAAAAARCSSIFSMYPVDTLKTRLQMEQANPFR---LEGLYKGVAGSLIGQVPYGVLTFGSYEMYKKALLNKFPNTKPVLLYAFSAVLGDLTGSGWLCPSEVIKQQTQAGMYKSTAEAFMGILRKKGIKGLYQGYFGGIARDVPFRVAQLTSYEVTKSFYLRIKSRRAKSASKSVKGKSTNE------------KIQLDAAESAICGAIAGSFSAAITAPLDRFKTLLMTDSAAYGGTVLSCASKIWRDEGIAG-FAKGVVPRVTYIAPSVAIFFIVYEQVRQRL 347
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: B8CE79_THAPS (Mitochondrial carrier protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE79_THAPS) HSP 1 Score: 187 bits (476), Expect = 6.610e-51 Identity = 112/265 (42.26%), Postives = 153/265 (57.74%), Query Frame = 1 Query: 292 YPLDTIKTRLHL--GRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGS---GGGAKNWRGAIKA----GSLFSGLGTRVLYVGTSSAVFFVVYEAVK 1059 YP+DTIKTR+ + G ++RV L Y G+ SLVGQVPYG+LTFG+YE+YK +LL RFP V + +AILGD+TGS WL PSEV+K Q+Q GI+ ++ +A I+K++G GFYQGF+G L RDVPFR QLT++E+ + + + S LS +AA+ G AG+ SA T PLD ++T +M + GG I G LF+G+G RV Y+ S +FFV YE V+ Sbjct: 2 YPIDTIKTRMQMRQGNAWRVKGL---YSGVMGSLVGQVPYGVLTFGSYEIYKQSLLTRFPNVKPTFIYALSAILGDITGSGWLCPSEVMKQQLQAGIYGNMGEAVRGIWKKSGLRGFYQGFTGGLARDVPFRVAQLTTFEVTKSIYLRAKRSNNKDND-------------------SIALSPLEAAICGAAAGSFSAAITNPLDRIKTLMMTDTTNAYGGSVVACASKILRDDGIGGLFAGVGPRVGYIAPSVCIFFVTYELVQ 244
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: M2Y040_GALSU (Mitochondrial carrier (BOU / S-adenosylmethionine carrier) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y040_GALSU) HSP 1 Score: 189 bits (481), Expect = 1.550e-50 Identity = 126/302 (41.72%), Postives = 162/302 (53.64%), Query Frame = 1 Query: 226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVP----------SLPD-LYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKAG----------SLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068 L AR HL +GAVAR S+ YP+DTIKTRL L S V S P LY G+ S+L+GQVPYGMLTFG+YE+YK+ L G + AAI+GD+TGSLWL PSEVVK ++Q G +S+ A IF G GFYQG+ GQ+ RD+PFRA+QL SYE LR + LS+ + ++G V+G+++A T PLDVL+TRLM G + A + + GLG RV Y+G S A+FFVVYE +K L Sbjct: 56 LYRARIHLLSGAVARGVSVFAMYPIDTIKTRLQLETSRGVANYWHSLRKALSKPKYLYWGVVSTLIGQVPYGMLTFGSYEIYKSWLTGSL-RASSRLVIVLAAIMGDLTGSLWLCPSEVVKSRLQAGQYSNTLDAIRKIFMTQGLKGFYQGYVGQIARDIPFRAIQLLSYEELRWRYRQWKKLSSIE-----------------------DLSNIENLVIGLVSGSVTAAVTTPLDVLKTRLMTQPIGVSTIAYSSAWDCARQLVQHEGLQAFWKGLGPRVFYIGPSGAIFFVVYEGMKRML 333 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig603.14562.1 >prot_L-elsbetiae_contig603.14562.1 ID=prot_L-elsbetiae_contig603.14562.1|Name=mRNA_L-elsbetiae_contig603.14562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp MVRPSTSSPASHLYFFHPPLLLLITLGSLVMSSTSKVDVCSSAAPDSVWAback to top mRNA from alignment at L-elsbetiae_contig603:4374..9131+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig603.14562.1 ID=mRNA_L-elsbetiae_contig603.14562.1|Name=mRNA_L-elsbetiae_contig603.14562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4758bp|location=Sequence derived from alignment at L-elsbetiae_contig603:4374..9131+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig603:4374..9131+ >mRNA_L-elsbetiae_contig603.14562.1 ID=mRNA_L-elsbetiae_contig603.14562.1|Name=mRNA_L-elsbetiae_contig603.14562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2106bp|location=Sequence derived from alignment at L-elsbetiae_contig603:4374..9131+ (Laminarionema elsbetiae ELsaHSoW15)back to top |