prot_L-elsbetiae_contig6022.14555.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6022.14555.1
Unique Nameprot_L-elsbetiae_contig6022.14555.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length83
Homology
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BLAST of mRNA_L-elsbetiae_contig6022.14555.1 vs. uniprot
Match: D7G2U2_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U2_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.220e-16
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 0 
Query:   33 LPPLLKAFSSLLRSLATIDWLAAALTMLTRWAHSRGAQTVAGQQAASRWGA 83
            LPPLLKA S LLR LA  +WLA ALT+LTRWAHSRGAQT AGQQAASRWGA
Sbjct:   57 LPPLLKAMSGLLRCLAATEWLAGALTLLTRWAHSRGAQTAAGQQAASRWGA 107
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BLAST of mRNA_L-elsbetiae_contig6022.14555.1 vs. uniprot
Match: A0A6H5LD86_9PHAE (DUF913 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD86_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 4.180e-16
Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0 
Query:   33 LPPLLKAFSSLLRSLATIDWLAAALTMLTRWAHSRGAQTVAGQQAASRWGA 83
            LPPLLKA S LLR L   +WLA ALT+LTRWAHSRGAQT AGQQAASRWGA
Sbjct:  727 LPPLLKAMSGLLRCLTATEWLAGALTLLTRWAHSRGAQTAAGQQAASRWGA 777
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6022.14555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2U2_ECTSI1.220e-1682.35UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LD86_9PHAE4.180e-1680.39DUF913 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6022contigL-elsbetiae_contig6022:11271..11519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6022.14555.1mRNA_L-elsbetiae_contig6022.14555.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6022 11258..11519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6022.14555.1 ID=prot_L-elsbetiae_contig6022.14555.1|Name=mRNA_L-elsbetiae_contig6022.14555.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp
METETAAVADGGEGTKGSSEASPATTTTIVEGLPPLLKAFSSLLRSLATI
DWLAAALTMLTRWAHSRGAQTVAGQQAASRWGA
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