prot_L-elsbetiae_contig6021.14553.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6021.14553.1
Unique Nameprot_L-elsbetiae_contig6021.14553.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 6.420e-84
Identity = 147/195 (75.38%), Postives = 157/195 (80.51%), Query Frame = 0
Query:    1 MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASATMTSVLYVDMNDPAPIGKAPLAGMINPAPAQSAPQSGLPPSVAAPQVLARGGSDTKLLEEQDGAVQVQINGTSGSSGAKXXXX--KARGGAV 193
            MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEI+QGIK ALKDVPN+DLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLE TRVVQ ASATMTSVLYVDMN+PAPIGK PLAGMIN A  +   QSGLP  VAAP+ L   G++   +EE DG   +   G SG S  +      K RGG V
Sbjct:  266 MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMTSVLYVDMNNPAPIGKVPLAGMINSAQNKGVAQSGLPKVVAAPKDLNPKGAEGASIEE-DGPRPINGTGVSGGSSVQKSRRVKKPRGGTV 459          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.910e-29
Identity = 60/98 (61.22%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    1 MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVV 98
            +F DTMVTNMDRITHR+FE+SF LR+ D   + E+I  IK AL+ +P VD+LSPFRVH   F    L +   CYFATKS DE+LYLQQ+AL+E TRVV
Sbjct:  245 VFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVV 342          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.100e-29
Identity = 60/98 (61.22%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    1 MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVV 98
            +F DTMVTNMDRITHR+FE+SF LR+ D   + E+I  IK AL+ +P VD+LSPFRVH   F    L +   CYFATKS DE+LYLQQ+AL+E TRVV
Sbjct:  435 VFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVV 532          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.560e-24
Identity = 55/103 (53.40%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    2 FSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASAT 104
            F +TMVTNMDRITHRKFES F ++     +V  ++  IK AL+  P +DLLSPFR +L+     GL+ +V+CYFATKS DEFL LQQ   LE  R V+S   T
Sbjct:  318 FVNTMVTNMDRITHRKFESEFHIQLDSFAQVEGLLDDIKIALQGFPKLDLLSPFRANLIAVESDGLRFSVLCYFATKSLDEFLMLQQKVFLEVGRCVESRGLT 420          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.790e-19
Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    2 FSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLS-PFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASATM 105
            F  T VTNM+RITHRKFE+   LRY D   +++++  IK  L+ +P +D ++ PFR   V      L I V CYF+TKS DEFL LQQ A LE  + V S +A++
Sbjct:  176 FVQTAVTNMERITHRKFEAIVPLRYQDHAVMSDVVTKIKEGLRKIPKLDTMTQPFRCSFVKVGSYSLDIEVTCYFSTKSIDEFLPLQQAANLEIIKAVYSCNASL 280          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: A0A1N6F138_9GAMM (MscS family membrane protein n=1 Tax=Sulfurivirga caldicuralii TaxID=364032 RepID=A0A1N6F138_9GAMM)

HSP 1 Score: 60.8 bits (146), Expect = 1.520e-7
Identity = 32/105 (30.48%), Postives = 58/105 (55.24%), Query Frame = 0
Query:    1 MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASATM 105
            +F++ +V N  R++HR+    F +RY D  KVA+I   I+  L++ P++D      V+   FA+S L+  V C+  T  + E+  +++  LL+   +V +  A M
Sbjct:  258 LFTNIVVENPSRMSHRRIYEKFGVRYGDQDKVAKITADIRQMLQNHPDIDQTQTIIVNFNTFADSSLECFVYCFTRTTVWVEYHQVKEAVLLQIADIVVAHGAEM 362          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: A0A1Q3W7R8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Amoebophilus sp. 36-38 TaxID=1895716 RepID=A0A1Q3W7R8_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 2.010e-7
Identity = 27/103 (26.21%), Postives = 56/103 (54.37%), Query Frame = 0
Query:    1 MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASA 103
            +FS  ++ N  R+T+R+ + +  +RYADAP +A+I++GI   L+  P++D       +  +F    +K+ +  +  T  + E+  +QQ   L+  +++    A
Sbjct:  248 VFSSIIIINASRMTNRRIKDTINIRYADAPILAKILEGINNMLQAHPDLDKTRRLAANFTEFGPFSIKLTIYAFTYTTEWQEYRDIQQRLFLDVIKIITDHGA 350          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: M1UW96_CYAM1 (Similar to small conductance mechanosensitive ion channel n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UW96_CYAM1)

HSP 1 Score: 58.2 bits (139), Expect = 1.390e-6
Identity = 33/98 (33.67%), Postives = 49/98 (50.00%), Query Frame = 0
Query:    7 VTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLL-SPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASA 103
            +TN  RIT+R+    F LRY D  K+  I++ ++  L +VP +        V   +FAE  L I + C         FL +QQ  L+E  R+V+S  A
Sbjct:  349 LTNNSRITNRRINLRFGLRYQDIDKIGRIVERVREMLAEVPEIAAYRESISVFFTEFAEYSLPIQLSCIVNVTDGRRFLEIQQQVLIELNRIVKSELA 446          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: A0A6F8PV04_9GAMM (Mechanosensitive ion channel protein MscS n=1 Tax=Thiosulfatimonas sediminis TaxID=2675054 RepID=A0A6F8PV04_9GAMM)

HSP 1 Score: 57.4 bits (137), Expect = 2.360e-6
Identity = 32/118 (27.12%), Postives = 65/118 (55.08%), Query Frame = 0
Query:    1 MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASATM---TSVLYVDMND 115
            +F++  + N  R+++R+ + +  +RYADA K+A+I+Q ++A L++ P +D      V+   F  S L   +  +  T  +  F  ++Q  LL+   +V+S  A M   T  L++++ +
Sbjct:  254 IFANIAIENPSRMSNRRIKETMGIRYADADKMAKIVQDVRAMLQNHPEIDTEETLIVNFNGFNHSSLDFFIYTFTKTTQWVLFHEIKQDVLLKVMAIVESNGAQMAFPTRTLHLEVEN 371          
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Match: UPI0004025EFF (mechanosensitive ion channel family protein n=1 Tax=Psychromonas aquimarina TaxID=444919 RepID=UPI0004025EFF)

HSP 1 Score: 56.2 bits (134), Expect = 6.730e-6
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 0
Query:    7 VTNMDRITHRKFESSFQLRYADAPKVAE-IIQGIKAALKDVPN-VDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQSASATM-----TSVLYVDMND 115
            +TN  +    +F + F LR+    +  + II   +  +   P  VD  SP RVHLV++ E  L I VV Y  T+S DEFL LQ++ L+E   +V+   A +     TS L +D ++
Sbjct:  446 ITNYSQRDMYQFRTKFCLRFETTQRQLKLIIDDFRHYIASHPRTVD--SPQRVHLVEYGEYSLNIEVVAYLNTRSLDEFLDLQEILLMELGEIVKQHGAQLALPSSTSYLAMDSDE 559          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6021.14553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G8R0_ECTSI6.420e-8475.38Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A4D9D8J2_9STRA2.910e-2961.22Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBI9_9STRA6.100e-2961.22Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A6U0TNP3_9STRA2.560e-2453.40Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0SR49_9STRA1.790e-1946.67Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A1N6F138_9GAMM1.520e-730.48MscS family membrane protein n=1 Tax=Sulfurivirga ... [more]
A0A1Q3W7R8_9BACT2.010e-726.21Uncharacterized protein n=1 Tax=Candidatus Amoebop... [more]
M1UW96_CYAM11.390e-633.67Similar to small conductance mechanosensitive ion ... [more]
A0A6F8PV04_9GAMM2.360e-627.12Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
UPI0004025EFF6.730e-634.48mechanosensitive ion channel family protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006685Mechanosensitive ion channel MscSPFAMPF00924MS_channelcoord: 2..99
e-value: 4.4E-7
score: 29.6
NoneNo IPR availablePANTHERPTHR43634:SF2LOW CONDUCTANCE MECHANOSENSITIVE CHANNEL YNAIcoord: 1..105
NoneNo IPR availablePANTHERPTHR43634FAMILY NOT NAMEDcoord: 1..105
IPR011066Mechanosensitive ion channel MscS, C-terminalSUPERFAMILY82689Mechanosensitive channel protein MscS (YggB), C-terminal domaincoord: 16..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6021contigL-elsbetiae_contig6021:8076..9112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6021.14553.1mRNA_L-elsbetiae_contig6021.14553.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6021 7984..9640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6021.14553.1 ID=prot_L-elsbetiae_contig6021.14553.1|Name=mRNA_L-elsbetiae_contig6021.14553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEIIQGIKAALKDVPNVD
LLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLETTRVVQS
ASATMTSVLYVDMNDPAPIGKAPLAGMINPAPAQSAPQSGLPPSVAAPQV
LARGGSDTKLLEEQDGAVQVQINGTSGSSGAKKKKKKARGGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006685MscS_channel
IPR011066MscC_channel_C