mRNA_L-elsbetiae_contig600.14526.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 5.280e-136 Identity = 219/282 (77.66%), Postives = 246/282 (87.23%), Query Frame = 2 Query: 53 EHEAAISLQRAWGQRRAHGFYKELKQGRVCRKQREEMRAGLQVDCEACASAGEKSADLKCRNLKKAWKDANELLFKGMARIQMSDRGDNWNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRSASEYLKTGVGLCVPPMCLLDYKGFRMVAQAHLPLGPTSLKMGSNDAGLTVLNRCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGE 898 +H AA++LQRAW +R A+ F K+LKQ ++CR R+EMRAGL VDCEAC+SAG+KSAD+K RN KKAWKD +ELLFKGMAR+QMSDRGDNWN+RWQEALSLPN + M+ Y+ SLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSV+PKRLGG+AGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELR ASEYL TGVGLC+PPMCLLDYKGFRM+AQAHLPLG TSLKMG+ND G TVLN C LD+RTA AA+ALGLR HI G + WV + E Sbjct: 11 DHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHI--GPRDWVGVQEEE 290
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: A0A835YKN4_9STRA (CLU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA) HSP 1 Score: 235 bits (600), Expect = 2.090e-66 Identity = 130/254 (51.18%), Postives = 161/254 (63.39%), Query Frame = 2 Query: 281 GMARIQMSDRGDNWNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRSASEYLKTGV-GLCVPPMCLLDYKGFRMVAQAHLPLGPTSLKMGSNDAGLTVLN-RCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDP 1036 G+ R+++ D GDNWN +QEA +LP ++ME+ Y+ L VY DF AV YGRTIISE+FLH Y++S+RP+ +GG AGGKK+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELR S Y GV GL PMC+LDYKGFRMV A LPLG +L GS+D G+ V+ + R EAA L LR H G V+ + ADVE H G D +Y+LDLAR+ PPEDP Sbjct: 19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRGHSYYAHAGVAGLHFSPMCILDYKGFRMVCAAQLPLGAATLISGSSDGGINVVGVGDAEVARVLEEAAARLRLRPHPCRGTTVY------------------------SGADVEVHKGLDGNLYMLDLARSMPPEDP 248
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 238 bits (607), Expect = 1.220e-61 Identity = 149/349 (42.69%), Postives = 193/349 (55.30%), Query Frame = 2 Query: 245 KAWKDANELLFKGMARIQMSDRGDNWNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRSASEYLKTGV-GLCVPPMCLLDYKGFRMVAQAHLPLGPTSLKMGSNDAGLTVLNRCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDPNATPHLSGILSVSANVLVRKGGKKAK----DATVTRAHASLKHYDILYKNGILEKEVPVRLLRDK----RLFMYYRLLRPEFVR 1264 ++W+ EL+F + G NWNE +Q AL LP ++ + + L V DF TAVTYG+TIISEYFL KS+R K LGGVAGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LR A+ YL T + GL CL+DYKGFRM AQA LP+ SL+ GS++ G TV N +L ++ AA+ L LR H V + +++A D+EGH+G YLLD AR FPPE P HLS ILS V V G K TV +L I+Y+ + + + DK +Y+R+LRPEFV+ Sbjct: 224 RSWERFRELVFPDDMEQAYRETG-NWNELFQSALDLPEETPDQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND------------------------KDMYSACDIEGHVGEGDSHYLLDFARTFPPESPKKVEHLSDILSDMTPVYVHIGDPPEKGIILSVTVPLDMHNLARKYIMYQVQLDSSNEVIEVCGDKVSDRHQSVYWRMLRPEFVK 547
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 205 bits (521), Expect = 4.100e-56 Identity = 118/242 (48.76%), Postives = 148/242 (61.16%), Query Frame = 2 Query: 317 NWNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRP-KRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRSASEYLKTGV-GLCVPPMCLLDYKGFRMVAQAHLPLGPTSLKMGSNDAGLTVLNRCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDP 1036 NWNE +Q AL LP D+ + + + V DF AVTYG+TIISEYFL KS++P + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LR A+ YL + GL CL+DYKGFRM AQA LP+ +L+ GS+DAG TV N L ++ A+ L LR H WV D E +++A D+EGH+G YLLD AR+FPPE P Sbjct: 10 NWNELFQSALDLPEDTPDQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTH-------WVN--DKE---------------MYSACDIEGHVGEGGSHYLLDFARSFPPESP 227
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: A0A835ZAL9_9STRA (CLU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.040e-46 Identity = 103/220 (46.82%), Postives = 128/220 (58.18%), Query Frame = 2 Query: 383 RLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRSASEYLKTGV-GLCVPPMCLLDYKGFRMVAQAHLPL-GPTSLKMGSNDAGLTVLNRCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDP 1036 + +L A+ DF+ AVTYGRTIISEYFL E KSV P +GG+AGG+K+L RGILFKLADGS+GPY GSDEAA KA ++L+ A +K + GL L+DYKGFRM AQA LPL +L+ GS DAG TV++ L + A L L+ H G +L DVEGH GTD +Y++D AR FPPE P Sbjct: 19 KYQALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGAVHLVKCSIPGLFCSLQALIDYKGFRMHAQAQLPLCSRATLRCGSCDAGATVVDGDGALRHKLRLVAAQLNLKAHRGRGGA-----------------------ELQLGCDVEGHRGTDGNLYVIDAARVFPPESP 215
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: D7G5H0_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H0_ECTSI) HSP 1 Score: 170 bits (431), Expect = 1.950e-40 Identity = 99/253 (39.13%), Postives = 146/253 (57.71%), Query Frame = 2 Query: 2678 PLSPDALTPFSRGDPEAKARDRDVTLATQFLLTVVVPATAKLLCAMPPSRLSVANLAHELHEHGVNVRHIGLLRAFVTPPTHETVVAAPVAGGTFAGETSAEILRDGALVEVVVRTLKLVLRSFQRSWMKSEQSSSEQGMHLLVAQFLNLVTGHHERADAFWREDVTIGVCQRFGAVALTESERAGLWTVFSKRPDLLLSIVKELVKVTGVRFVENVEQELRSETAASFIVGFNFGLKDIREIEAVVTRMAFL 3436 PLSPDALT F++G + R++++ AT +L VP + L ++P +L ELH HGVNVRH+G +R + + E+L+D L E++ RTLK +LR FQR+WMK+E+S+SEQGM +LV +FLNLVTG H + FW+++V GV QRFG V+LT SER + + S+ P +L V +L ++ GV E+ + +++ VGF F + DI EI+ +V M L Sbjct: 171 PLSPDALTFFTKGSTDRAERNQEIHDATAAMLEAAVPNVVEKLTSLPQDVQKTLHLDVELHRHGVNVRHLGRVRYLLMEQN----------------KPENELLKDMMLTEMIARTLKNILRCFQRTWMKAERSTSEQGMRMLVVRFLNLVTGAHVNSATFWKKNVLTGVLQRFGLVSLTTSERRDVQKI-SRNPCVLQDCVFKLTEMQGVELTEDAKAHFYADSP----VGFEFMVSDIHEIKPIVRYMHIL 402
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: A0A7R9UF47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA) HSP 1 Score: 162 bits (409), Expect = 5.320e-40 Identity = 119/317 (37.54%), Postives = 162/317 (51.10%), Query Frame = 2 Query: 257 DANELLFKGMARIQMSDRGDNWNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRSASEYLKTGVG-LCVPPMCLLDYKGFRMVAQAHLPL-------GPTSLKMGSNDAGLTVLNRCRT----------------------LDR---RTAEAARALGLREHI------------VGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDPNATPHLSGILSV 1072 D +E FK + +WNER+Q L LP+ SD E+R+RL+ L A Y+DFV TA TYG +ISE FL+E +K++ + + G+AGG+KY +RGI FKLA G + PYGG AA+KA GHEL+ A+ Y + V L +P L+DY+G+R++AQ LP+ P +LK+GS A V + + L R R A +A + E I + QV+ T RK VK + AA DVEGH G D Y++D ARAFPPE PN + SV Sbjct: 9 DGSEQEFKAVEPSVGLIHEPDWNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGATHYSRCNVTELNIPMHVLIDYRGYRLLAQTKLPIKPGKSLENPGTLKVGSAKACEVVFSVEQEEEPTAPPIAATKPGRYPQPYPLLPREPLRRAGSALLMPANERIFALMEAASNELNIAPHQVFCQTT----------RKPVK---VPAAFDVEGHEGMDGLFYVVDFARAFPPEAPNLAEQMHESASV 311
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: A0A7R9UB16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB16_9STRA) HSP 1 Score: 162 bits (410), Expect = 4.890e-38 Identity = 97/251 (38.65%), Postives = 143/251 (56.97%), Query Frame = 2 Query: 293 IQMSDRGDNWNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKR-LGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRSASEYLKTG--VGLCVPPMCLLDYKGFRMVAQAHLPLGPTSLKMGSNDAGLTVLNRCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDP 1036 + +S G +W R++EAL LP+ ++ E + ++ ++ DF A Y R IISE+ L K++RP +GG AGG+KY+ + ILFK A +G +GG+DE A+K AGHELR + YL+ +G+ VP C++D+ G R++A+A P+G +L GS+D G+TV N L + A+ A L L EH + ++LHAA DVEGH+GTD +LLD AR +PPE P Sbjct: 21 LPLSGGGTDWCGRFREALELPSRNEEELLVKFEAMASLARDFTCQAEIYARIIISEHHLPLSEKTLRPNETVGGFAGGQKYVCQNILFKFAVDDRGLFGGNDEPASKFAGHELRGLNWYLRYAQDLGILVPLTCVVDFMGMRILAKAVAPVGHDTLVYGSDDGGVTVQNANEELAEKMAQVALRLNLAEH------------------------QCQDKQLHAACDVEGHLGTDGSFWLLDTARCWPPEAP 247
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: A0A151ZG68_9MYCE (Clu domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZG68_9MYCE) HSP 1 Score: 166 bits (420), Expect = 2.000e-37 Identity = 101/243 (41.56%), Postives = 144/243 (59.26%), Query Frame = 2 Query: 320 WNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKRLGGVAGGKKYLWRGILFKLADGSQ--GPYGGSDEAAAKAAGHELRSASEYLKTGV-GLCVPPMCLLDYKGFRMVAQAHLPLGPTSLKMGSNDAGLTVLNRCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDPN 1039 WN +Q+ + + D +EK RLSSL+ DFV+ A TYGR IISE+FL +++++P +GG+AGG+KY+ +GILFK A ++ G YG +DE A K A HEL + +L GV GL VP M +DY+GFR+VA + LP+ SL GS+DAG TV + A +A+ + L+ H+V + G+ + LH D+EGH+G+D+R YLLD AR PPE P+ Sbjct: 315 WNSEFQKLIEM--DDCLEKFERLSSLE---HDFVYAAETYGRIIISEHFLPHNVRTIKPVTVGGIAGGEKYIVQGILFKFAVENETFGLYG-NDENAMKTAAHELNGCTSFLNVGVKGLHVPLMAYIDYRGFRLVAMSLLPISKKSLVYGSSDAGQTVHTSNTLFNHLFASSAKIVNLKSHLVQD-------SSGDF------------KSLHGPIDIEGHIGSDNRFYLLDFARLSPPEPPS 532
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Match: L8GQC5_ACACA (Clu domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQC5_ACACA) HSP 1 Score: 165 bits (417), Expect = 5.660e-37 Identity = 106/256 (41.41%), Postives = 139/256 (54.30%), Query Frame = 2 Query: 320 WNERWQEALSLPNDSDMEKRYRLSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVRPKRLGGVAGGKKYLWRGILFKLA-DGSQGPY------GG---SDEAAAKAAGHELRSASEYLKTGV-GLCVPPMCLLDYKGFRMVAQAHLPLGPTSLKMGSNDAGLTVLNRCRTLDRRTAEAARALGLREHIVGGWQVWVTYTDGETGKKKWRRKNVKRQKLHAAADVEGHMGTDSRMYLLDLARAFPPEDPNATPHL 1054 WNE WQ L L + R R + L + DFV TA YG IISE FL + K+++P +GG+AGG+KY+ RGI FKLA D G Y GG SDE A KA+GHEL+S + + L P MC +DY+GFR+V + LP+ ++L GSND GLTVL + L R+ +A + L L+ HIVG +V L+ D+EGH G D R Y++DLAR FP E P A+ L Sbjct: 434 WNEEWQTVLGLS-----DTRQRHAELARLSRDFVDTASKYGLIIISELFLPDAKKTIQPAAVGGIAGGQKYIVRGIFFKLAFDFKLGKYNSVWMYGGEKRSDEFAIKASGHELKSLIMMHRACIPDLHCPLMCTVDYRGFRLVCCSVLPISSSTLCYGSNDGGLTVLKKEAELSRKVEQACKWLHLKRHIVGNKEV----------------------ALYGPGDLEGHKGKDGRFYVVDLARLFPAEAPRASESL 662 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig600.14526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig600.14526.1 >prot_L-elsbetiae_contig600.14526.1 ID=prot_L-elsbetiae_contig600.14526.1|Name=mRNA_L-elsbetiae_contig600.14526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1151bp MAGASQKLAEVGLEHAREHEAAISLQRAWGQRRAHGFYKELKQGRVCRKQback to top mRNA from alignment at L-elsbetiae_contig600:20198..34334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig600.14526.1 ID=mRNA_L-elsbetiae_contig600.14526.1|Name=mRNA_L-elsbetiae_contig600.14526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=14137bp|location=Sequence derived from alignment at L-elsbetiae_contig600:20198..34334- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig600:20198..34334- >mRNA_L-elsbetiae_contig600.14526.1 ID=mRNA_L-elsbetiae_contig600.14526.1|Name=mRNA_L-elsbetiae_contig600.14526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6906bp|location=Sequence derived from alignment at L-elsbetiae_contig600:20198..34334- (Laminarionema elsbetiae ELsaHSoW15)back to top |