prot_L-elsbetiae_contig60.14518.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig60.14518.1
Unique Nameprot_L-elsbetiae_contig60.14518.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length397
Homology
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BLAST of mRNA_L-elsbetiae_contig60.14518.1 vs. uniprot
Match: A0A6H5KD18_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD18_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.060e-96
Identity = 197/355 (55.49%), Postives = 227/355 (63.94%), Query Frame = 0 
Query:   49 AEAAGLWGLGSKNAAQRGVSRQSAISDDDSMDEVFAKLQQEQFWAEVEHAGMQVLEEEVAEKKSKEIFVQVAKACSIGAQMTLIMGGGALLFRLLPVLLGHELEDEEEVDAASTYLLQADHSRGRAQQALPAXXXXXXXXXXXXXXXTGGHEELEEDVAVRLEGQAECCGEAGGSGAADVGELAEGGDGAALMKSGGSAGAVVAAEHGEGE--------------------------EEEEVGDGEVVMDTPRRAALRKARRLSRPFLRAMAPPLALLLVARLALGKLMVERIDPTLELLFGDDIIDLYSVNRKVVNKVDMPFPKDAEDVPGRKKMKGRSVQRLPRPEGEEEXXG 377
            AEAAG WGLG   A  RG    S   DDD M EVFAK Q+EQFW +VE+AGM+VLEEEVAEKK+KEIF QVA+ACS+GAQMTLIMGGGALLFRLLPVLLGH+L+D+E  DA + YLLQ D  R + Q +L A                       ED AVRL G                 E  EG DG A++         +AA  GEG                           E EEVGD +VV++T  R +LRKARRLSRPFL+AMAPPLALLLVARLALG ++  RIDPTLELLFGDD++DLYS N+KV+NKVDMPF KDA+DVPGRKKMKG+ VQR PRP+GEE   G
Sbjct:   68 AEAAGSWGLGGGRAG-RGFPVGSDGPDDDDMAEVFAKFQEEQFWEDVEYAGMEVLEEEVAEKKTKEIFAQVARACSVGAQMTLIMGGGALLFRLLPVLLGHDLDDDEGDDANTPYLLQLDDHRPQ-QASLDAARGRRQPLLTSVPN---------EDAAVRLHG-----------------EETEG-DGTAVVVG-------LAAAEGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEVGDVDVVVETRLRVSLRKARRLSRPFLKAMAPPLALLLVARLALGTVLARRIDPTLELLFGDDVMDLYSTNKKVINKVDMPFAKDAQDVPGRKKMKGKGVQRQPRPDGEEGRGG 386
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig60.14518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD18_9PHAE1.060e-9655.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 47..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 38..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 308..396
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 289..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig60contigL-elsbetiae_contig60:8765..13605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig60.14518.1mRNA_L-elsbetiae_contig60.14518.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig60 8699..14080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig60.14518.1 ID=prot_L-elsbetiae_contig60.14518.1|Name=mRNA_L-elsbetiae_contig60.14518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=397bp
MRSTTKERFKANSAVGMPCSLRRERSLRSATSTWSTKGLLLLVCFLSTAE
AAGLWGLGSKNAAQRGVSRQSAISDDDSMDEVFAKLQQEQFWAEVEHAGM
QVLEEEVAEKKSKEIFVQVAKACSIGAQMTLIMGGGALLFRLLPVLLGHE
LEDEEEVDAASTYLLQADHSRGRAQQALPAAAAGGGAGGGRQRLLTGGHE
ELEEDVAVRLEGQAECCGEAGGSGAADVGELAEGGDGAALMKSGGSAGAV
VAAEHGEGEEEEEVGDGEVVMDTPRRAALRKARRLSRPFLRAMAPPLALL
LVARLALGKLMVERIDPTLELLFGDDIIDLYSVNRKVVNKVDMPFPKDAE
DVPGRKKMKGRSVQRLPRPEGEEEEEGRDRENEEGESLLYISVRRL*
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