mRNA_L-elsbetiae_contig101.144.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig101.144.1
Unique NamemRNA_L-elsbetiae_contig101.144.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: B5LWE6_9PHYC (Sulfhydryl oxidase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE6_9PHYC)

HSP 1 Score: 134 bits (338), Expect = 7.980e-38
Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = 1
Query:   13 SGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEAN-YKLFFIAVGSTLPCHLCRESYSEFLRNNPVRTSSREELTRWLWEIHNEVNLKLGRTYESADFESVKQSYEKFRAKCPTNSSATGC 399
            +G+  + WGP GWK+LHSVAHGFP +P              E N Y +FF  VGS LPC LCR SY+EF+   PV  ++R++LTRWLW+IHN VN KLG  Y+ + F+ V Q YE +RA C    + TGC
Sbjct:   10 NGLATSEWGPAGWKFLHSVAHGFPTTP-----------SVEEVNDYTIFFETVGSVLPCRLCRASYNEFIGRLPVEAANRDQLTRWLWKIHNMVNEKLGVVYKKSGFDEVSQKYESYRASC----TKTGC 124          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: Q6XLY8_9PHYC (Sulfhydryl oxidase n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLY8_9PHYC)

HSP 1 Score: 116 bits (291), Expect = 9.910e-31
Identity = 54/119 (45.38%), Postives = 70/119 (58.82%), Query Frame = 1
Query:   10 SSGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRNNPVRTSSREELTRWLWEIHNEVNLKLGRTYESADFESVKQSYEKFRA 366
            ++ +  T+WGP GWK+LH VAHG PD P   +             Y  FF ++   LPC LCR SYS +L  NP+R +++++L RWLWEIHN VN KLG TY   DF +V   YE   A
Sbjct:    2 TTNVSTTLWGPHGWKFLHYVAHGCPDHPSHEEIQ----------KYVAFFTSLQDVLPCTLCRNSYSSYLITNPIRANTKKDLCRWLWEIHNMVNAKLGVTYRETDFGTVYARYEAAAA 110          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A6C0BE47_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BE47_9ZZZZ)

HSP 1 Score: 106 bits (264), Expect = 2.250e-25
Identity = 53/142 (37.32%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    1 MQNSSGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRNNPVRT------SSREELTRWLWEIHNEVNLKLGRTYESADFESVKQSYEKFRAKCPTNSSATGCTVP 408
            + + +G++ ++WGP  W+++HSVA G+P SP E            + NYK FFI +G  LPC  CR S+ +F+  N           SRE LT+W + +HN +N KLG  Y    +E +   YE +RAKC  + +A GC +P
Sbjct:   34 VDSGNGLITSIWGPHAWEFIHSVAFGYPISPSEEQ----------KKNYKDFFIKMGDILPCGYCRTSFKQFITENQDTVIDDNVMKSRENLTKWTFNLHNAINNKLGHNYGET-YEEMCFKYESYRAKC--SKTANGCVMP 162          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A2E3C071_9PROT (Thiol oxidase n=1 Tax=Magnetococcales bacterium TaxID=2026759 RepID=A0A2E3C071_9PROT)

HSP 1 Score: 103 bits (257), Expect = 2.290e-24
Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 1
Query:   10 SSGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRNNPVRTS-----SREELTRWLWEIHNEVNLKLGRTYESADFESVKQSYEKFRAKCPTNSSATGCTVP 408
            ++G++  +WGP GWK+LHSV+ G+P            P    +  Y+ FF +VG  LPC  CRESY +F++    +       +R+ LTRWL+ IH  VN KL  TY    ++ V   YE +RAKC +   A GC +P
Sbjct:    6 NNGLITKIWGPSGWKFLHSVSFGYPIK----------PTNEQKNEYRNFFKSVGDILPCVYCRESYKKFIQEGCTKLDENALENRDSLTRWLYNIHEAVNEKLEVTY-GVTYQDVVNKYESYRAKC-SKQKAKGCLMP 131          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A1V0SBX0_9VIRU (Sulfhydryl oxidase n=1 Tax=Catovirus CTV1 TaxID=1977631 RepID=A0A1V0SBX0_9VIRU)

HSP 1 Score: 103 bits (256), Expect = 2.640e-24
Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 1
Query:   10 SSGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRNNPVRTSS-----REELTRWLWEIHNEVNLKLGRTYESADFESVKQSYEKFRAKCPTNSSATGCTVP 408
            ++G++  +WGP  WK LH +  GFP +P + +          +  YK+FF ++   LPC  CR+SY +F+ + P + +      R+ LT+WL+ +H  VN KLG  YE   +E+V ++YE FRAKC    S  GC +P
Sbjct:    8 NNGLITKIWGPHLWKSLHCITFGFPLNPSDEE----------KKQYKIFFESLAFVLPCKYCRDSYHQFINSEPTKITDEVLKDRKSLTKWLYNLHQRVNNKLGVDYE-VPYENVVETYESFRAKCSPKIS--GCVMP 132          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A6C0HM60_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HM60_9ZZZZ)

HSP 1 Score: 101 bits (251), Expect = 7.610e-24
Identity = 55/144 (38.19%), Postives = 81/144 (56.25%), Query Frame = 1
Query:   13 SGMMVTMWGPPGWKYLHSVAHGFPD--SPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRN-NPV-RTSSREELTRWLWEIHNEVNLKLGRTY-ESADFESVKQSYEKFRAKCP-------TNSSATGCTVP 408
            +GMM  +WGP GW +LH VA G+P+   P   + L        + +Y  FF  +G   PC  CR SY +F+   +P+    SR E+++WL++IHN+VN KLG    E   FE V ++YE+FRAKC        +++   GC +P
Sbjct:   22 NGMMTKVWGPAGWLFLHCVAAGYPNVIDPSNPEHLE------KQNDYYRFFYYLGKVFPCKYCRNSYQQFITELSPISHMGSRAEISKWLYDIHNKVNDKLGVPLCERPSFEEVDKTYEQFRAKCTPLTDKERSDNKGKGCIIP 159          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A6C0EYJ6_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EYJ6_9ZZZZ)

HSP 1 Score: 100 bits (248), Expect = 2.520e-23
Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 1
Query:   13 SGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFL-RNNPV-RTSSREELTRWLWEIHNEVNLKLG-RTYESADFESVKQSYEKFRAKCP--------TNSSAT-GCTVP 408
            +G+M  +WGP GW +LH V+ G+P      +  H +     + +Y  FF  +G  +PC  CR SY EF  +++P+ +  SR+E T+WL++IHN VN KLG    E   FE V++ Y+ FRA C         TNSS+  GC +P
Sbjct:   22 NGLMTRLWGPSGWMFLHCVSFGYPYKIDPTNQEHIDK----QNDYYRFFYYLGKVMPCKYCRNSYMEFFTKSSPMSQLGSRKEFTKWLYDIHNMVNDKLGVPKCEIPTFEEVEEKYQSFRASCKPLTEAQRTTNSSSVKGCIIP 161          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A6C0AYJ6_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AYJ6_9ZZZZ)

HSP 1 Score: 100 bits (250), Expect = 3.140e-23
Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 1
Query:    1 MQNSSGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRN-----NPVRTSSREELTRWLWEIHNEVNLKLGRTYESADFESVKQSYEKFRAKCPTNSSAT----GCTVP 408
            + + +GM   +WGP GW +LH +A  +P  P +            +  Y  FF ++G+ LPC  CRESY +F+R      N      R+  ++WL++IHN++N KLG       F+ V + YE FR+KC T S  T    GCT P
Sbjct:   12 LYSKNGMQTRVWGPAGWVFLHCIAQNYPQEPTQEQ----------KEQYLTFFTSIGNVLPCRYCRESYQDFIRQPGTMLNYSVMKDRKTFSKWLFDIHNKINKKLG-INNCVTFKEVTEKYESFRSKC-TKSKQTEPIKGCTNP 144          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A6C0IA48_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IA48_9ZZZZ)

HSP 1 Score: 96.3 bits (238), Expect = 1.490e-21
Identity = 53/140 (37.86%), Postives = 70/140 (50.00%), Query Frame = 1
Query:    7 NSSGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRNNPVRTS-----SREELTRWLWEIHNEVNLKLGRTYESADFESVKQSYEKFRAKCP-TNSSATGCTVP 408
            + +GM   +WGP GW +LHSVA  +P            P      NY +FF  +G+ LPC  CRESY EF+             +R  L +WL+ IHN+VN KLG T + +   +V   YE FR+KC  T     GC  P
Sbjct:    9 DDTGMQTRVWGPAGWLFLHSVAQNYP----------WKPTSEQIKNYLIFFKYLGNVLPCRYCRESYQEFVSQKDTLLDENVLKNRYTLVKWLYNIHNKVNNKLGITCKDS-LRNVWTKYESFRSKCTKTQPKVKGCLDP 137          
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Match: A0A2E4HKW1_9BACT (Thiol oxidase n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A2E4HKW1_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 8.120e-21
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1
Query:   19 MMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYKLFFIAVGSTLPCHLCRESYSEFLRNNPVRTSSREELTRWLWEIHNEVN 294
            M   +WGP  WK+LH++   +PD+P + D LH          YK FF  + + LPC +CR  YS+ ++  P+R  S++ELT+WL++IHN+VN
Sbjct:    1 MKPNIWGPSAWKFLHTITLNYPDNPTKEDKLH----------YKTFFNTLENVLPCDVCRLHYSKNIKELPIRLDSKDELTKWLFDIHNKVN 82          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B5LWE6_9PHYC7.980e-3849.23Sulfhydryl oxidase n=1 Tax=Feldmannia species viru... [more]
Q6XLY8_9PHYC9.910e-3145.38Sulfhydryl oxidase n=1 Tax=Feldmannia irregularis ... [more]
A0A6C0BE47_9ZZZZ2.250e-2537.32Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A2E3C071_9PROT2.290e-2438.41Thiol oxidase n=1 Tax=Magnetococcales bacterium Ta... [more]
A0A1V0SBX0_9VIRU2.640e-2436.96Sulfhydryl oxidase n=1 Tax=Catovirus CTV1 TaxID=19... [more]
A0A6C0HM60_9ZZZZ7.610e-2438.19Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0EYJ6_9ZZZZ2.520e-2338.89Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0AYJ6_9ZZZZ3.140e-2335.86Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0IA48_9ZZZZ1.490e-2137.86Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A2E4HKW1_9BACT8.120e-2141.30Thiol oxidase n=1 Tax=Nitrospinae bacterium TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig101contigL-elsbetiae_contig101:27418..27825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score132.9
Seed ortholog evalue1.1e-28
Seed eggNOG ortholog654926.Q8QNC1_ESV1K
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Erv1 / Alr family
EggNOG OGs4QB94@10239,4QVJI@35237
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionEsV-1-161 thiol oxidoreductase
Ec32 orthologEc-06_005300.1
Exons1
Model size408
Cds size408
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815241.585823-CDS-L-elsbetiae_contig101:27417..278251622815241.585823-CDS-L-elsbetiae_contig101:27417..27825Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig101 27418..27825 -
1691682790.8005238-CDS-L-elsbetiae_contig101:27417..278251691682790.8005238-CDS-L-elsbetiae_contig101:27417..27825Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig101 27418..27825 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig101.144.1prot_L-elsbetiae_contig101.144.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig101 27418..27825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig101.144.1

>prot_L-elsbetiae_contig101.144.1 ID=prot_L-elsbetiae_contig101.144.1|Name=mRNA_L-elsbetiae_contig101.144.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MQNSSGMMVTMWGPPGWKYLHSVAHGFPDSPREYDALHGNPLGTTEANYK
LFFIAVGSTLPCHLCRESYSEFLRNNPVRTSSREELTRWLWEIHNEVNLK
LGRTYESADFESVKQSYEKFRAKCPTNSSATGCTVP
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mRNA from alignment at L-elsbetiae_contig101:27418..27825-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig101.144.1 ID=mRNA_L-elsbetiae_contig101.144.1|Name=mRNA_L-elsbetiae_contig101.144.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=408bp|location=Sequence derived from alignment at L-elsbetiae_contig101:27418..27825- (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGAATAGTAGTGGGATGATGGTGACCATGTGGGGTCCACCCGGGTG GAAGTATTTGCACAGCGTCGCGCACGGATTCCCTGATTCGCCCCGAGAAT ACGACGCACTGCATGGGAATCCACTTGGAACCACTGAGGCAAACTACAAA TTGTTTTTCATCGCAGTAGGGAGTACTCTTCCCTGTCACCTATGTAGAGA ATCCTATTCGGAATTCCTTCGAAACAACCCTGTTCGTACGAGTAGCAGAG AAGAGCTCACCCGATGGCTTTGGGAAATCCACAACGAAGTCAACCTGAAA CTGGGTCGCACATACGAGTCAGCTGATTTCGAATCTGTAAAGCAGTCGTA CGAAAAGTTTCGAGCAAAGTGCCCAACGAATTCTTCGGCGACAGGATGCA CGGTTCCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig101:27418..27825-

>mRNA_L-elsbetiae_contig101.144.1 ID=mRNA_L-elsbetiae_contig101.144.1|Name=mRNA_L-elsbetiae_contig101.144.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig101:27418..27825- (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGAATAGTAGTGGGATGATGGTGACCATGTGGGGTCCACCCGGGTG
GAAGTATTTGCACAGCGTCGCGCACGGATTCCCTGATTCGCCCCGAGAAT
ACGACGCACTGCATGGGAATCCACTTGGAACCACTGAGGCAAACTACAAA
TTGTTTTTCATCGCAGTAGGGAGTACTCTTCCCTGTCACCTATGTAGAGA
ATCCTATTCGGAATTCCTTCGAAACAACCCTGTTCGTACGAGTAGCAGAG
AAGAGCTCACCCGATGGCTTTGGGAAATCCACAACGAAGTCAACCTGAAA
CTGGGTCGCACATACGAGTCAGCTGATTTCGAATCTGTAAAGCAGTCGTA
CGAAAAGTTTCGAGCAAAGTGCCCAACGAATTCTTCGGCGACAGGATGCA
CGGTTCCGATGCAGAATAGTAGTGGGATGATGGTGACCATGTGGGGTCCA
CCCGGGTGGAAGTATTTGCACAGCGTCGCGCACGGATTCCCTGATTCGCC
CCGAGAATACGACGCACTGCATGGGAATCCACTTGGAACCACTGAGGCAA
ACTACAAATTGTTTTTCATCGCAGTAGGGAGTACTCTTCCCTGTCACCTA
TGTAGAGAATCCTATTCGGAATTCCTTCGAAACAACCCTGTTCGTACGAG
TAGCAGAGAAGAGCTCACCCGATGGCTTTGGGAAATCCACAACGAAGTCA
ACCTGAAACTGGGTCGCACATACGAGTCAGCTGATTTCGAATCTGTAAAG
CAGTCGTACGAAAAGTTTCGAGCAAAGTGCCCAACGAATTCTTCGGCGAC
AGGATGCACGGTTCCG
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