mRNA_L-elsbetiae_contig599.14498.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: D7G861_ECTSI (ADP-ribosylation factor GTPase-activating protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G861_ECTSI) HSP 1 Score: 874 bits (2259), Expect = 1.000e-297 Identity = 707/1264 (55.93%), Postives = 751/1264 (59.41%), Query Frame = 1 Query: 73 MDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVRRMELGGNGQLRAWFKKCHTENSALEMKYRTKAATLYRDNLRAAADXXXXXXXXXXXXXXXXXXVTARSPERAPVSGKGKGKGRIFVAAERAAADNLARENAEAXXXXXXXXXXXXXXXXXXXXGEHDGT-GTAAVSPISASTVDNRTKRPSSERTHGAPSAAVGSATSGAL--SGMEEQARRCGKDEEYEVVFGPGGMGFTLMKDAVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGARLHDYDQLMLLLPRAPRPLRLLFEGAGAALAAPPSSYSTKPAKLGANGGRNLDGNSSDFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEIARNRHSGQENSGSKEQVSSAPALRTAAVADSTVPPRSPPARGNQTSGDEGAEPLQDRQRLVTDVVAEPEGVVTIGNXXXXXXXXXXXXXXXXXXXXXXXXXNEQDDQATTAGPDKRSGDGDGDSGDHTTGGSPEQDGHDVCDAKVGGGAPSAAYDDATPEAAARTIPAEEAPREDGDKQDGMSGKVAPAERTANSTVVVATAAMGEEEEIGAGPKGSVVGEHATASVEGRAAKPPREGTKEEEVGQEGRGEGDDGRKSKSXXXXXXXXXXXXXXXXXXXXXXKSSGASPSNGKPEPAIGVLSVGSKVTVQDKKKGSKWRKGLLRRMHGDESWTVRYSGGMEERRVAASRVRSRYAEE-SPTAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNG---DGWRQPAQAPLAWAPADGTKGRQEEFRAPGELGDDFFGGSDSSGNGSDSSGAAVSALTAYAGLDSTAAATSVPRAFVPSAPAAPAPTYAAGYAAPRRMEGFGGGGRS------VARGMGPGAPPSLTGGTAQQPMRPREHTVVFPEGGMGLTLTKELDGGCSVTKLVPGGVAHSRGVALGQRVCAVNGQPSGTYEQTMAIISGSSRPISITFVMPTDGSGSG-GSRLSGAGGGPPLVQQSWADVGLAATIGAMDAANAVAVEWGLGASTPGVLDEVQAS-VGSIPPPPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDMPTMSTKKALSDTPGLEVGEFDVRFGEGELGMRLEERGSFDASSVVVRVTEDAGQAMSLGVREGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRFRAP 3819 MDCG PETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSL MDRWDAGQVRRMELGGNGQL+AWF KC TENSALEMKYRTKAATLYR+NLR AAD A + AP G KGRIF AAERAAA +LA+E A XXXXXXXXXXXXXXXXX E G +AA P++A R PS+ H AA G AT+ A SGMEE ARRCG++EEYEVVFGPGGMGFTLMKDAVSRALVTRLAPGGMAFRLGVRTGDYLVGVDG RLHDYDQLMLLLPR PRPLRLLFEGAGAALAA P PA G F+S V A Q + S V D PP P G VA PE V + Q+D+ P S +G D V G A +AA + EE G G VA E V V A E E A +A+VEG A+ RE V G XXXXXXXXXXXXXXXXXXXXXX SSG GK E +G GSKV VQDKKK SKWRKGLLRR HGD SWTVRYSGGMEERRVA R+R R E SP XXXXXXXXXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXXX +GW A AP AWA AD + R E+FRAPGEL DDFF +D SG+ S AVSAL Y D AA APRRMEGFGGGGR VA G G G AQQP++ R HTVVFP GGMGLTLTKE+ GGCSVTK+VPGGVA SRGVALGQRVCAVNGQPSGTYE TMA+I GS RPISITFVMP+ G GSG G R SG GGGPP+VQ +WADVGLAATIGAMDAANAVAVEWGLGA+TPGVL +S G IPP PQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDM TMSTKKALSD PG EVGEFDVRFGEGELGMRLEERGSF ASSVVV++TE GQA+SLGVREGC VVGINGEKYLSHAHTVATLKHA+RPV VRFR P Sbjct: 1 MDCGAPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLAMDRWDAGQVRRMELGGNGQLQAWFTKCQTENSALEMKYRTKAATLYRENLRVAADEDLASGGGQ----------AAGELQGAP----GSRKGRIFAAAERAAASSLAQEEAXXXXXXXXXXXXXXXXXXXRREAERAGALSSAAQVPVAA-----RHDPPSA---HAGAGAAPGGATAAATVGSGMEEYARRCGREEEYEVVFGPGGMGFTLMKDAVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRRLHDYDQLMLLLPRTPRPLRLLFEGAGAALAASP------PAAPG-------------FASAPTA---------------------------------------VGEATAAAPDQRDGDSSXXXXXXXXXXXGGVRDGEEPPC--PVVG----------------------VALPEAVAEPSD-------------------------RAQEDKPRQKEPAVVSEEGQ------------------PSDNAVNGAAVAAA-----------AVVVEE----------GDIGAVATVEE-----VAVEARAKQESRETHAAANSF---SSPSAAVEGEEAERTRES-----VAHNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSG-----GKAEQGLGE---GSKVAVQDKKKSSKWRKGLLRRRHGDGSWTVRYSGGMEERRVAVDRMRLRVPERTSPPPXXXXXXXXXXXXXSTHVTAATGTSGERVEGRRRSRKAXXXXEEKISPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNGWEAAASAPGAWAAADTAQDRHEDFRAPGELRDDFFADNDGSGSSSRGDEEAVSALAGYGRQDPGAAXXXXXXXXX---------XXXXXXXAPRRMEGFGGGGRGWRGEGEVASGGG-----GSVGKAAQQPVKSRGHTVVFPAGGMGLTLTKEMSGGCSVTKVVPGGVADSRGVALGQRVCAVNGQPSGTYEHTMAVIGGSPRPISITFVMPSTGGGSGNGGRFSGVGGGPPVVQHTWADVGLAATIGAMDAANAVAVEWGLGANTPGVLAGAHSSGAGDIPPAPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDMATMSTKKALSDAPGEEVGEFDVRFGEGELGMRLEERGSFKASSVVVKITE-GGQAVSLGVREGCKVVGINGEKYLSHAHTVATLKHARRPVVVRFRLP 1060
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: W7TXK3_9STRA (Adp-ribosylation factor gtpase-activating (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXK3_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.850e-30 Identity = 106/293 (36.18%), Postives = 144/293 (49.15%), Query Frame = 1 Query: 2959 REHTVVFPEGGMGLTLTKELDGGCSVTKLVPGGVAHSRGVALGQRVCAVNGQPSGTYEQTMAIISGSSRPISITFVMPTDGSGSGGSRLSGAGGGPPLVQQSWADVGLAATIGAMDAANAVAVEWGLGASTPGVLDEVQASVGSIPPPPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDMPTMSTKKALSDTPGLEVGEFDVRFGEGELGMRLEE------RGSFDASSVVVRVTEDAGQAMSLGVREGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRFRAP 3819 RE++VVF EG MGLTL+K G VT + P G A GV +G + +++ Q Y+ MA + RP+ + F +G GS GA GGP W G + + + A G G S +V S+ P A+P+ +A +S ++ + + +TK L++ P + GEFD F EG LGMRLEE G V++VT G A S GVR+GC VVG+NGE+++SHAHTVATLKH KRPV VRFR P Sbjct: 173 REYSVVFGEGPMGLTLSKVEGGRALVTSVAPAGQAVLGGVRVGDALVSLDHQAMALYDLVMARLPSLPRPLVVGFRRRMEGMGS----TEGAVGGPRAPGPRWLGSGAS-----LSGSGGKAFAGGFGKSL-----QVLTRHASLGP-----------GAAAVPS-LASASSSSFTSGGSYPLGGGSGL---TTKVPLTEDP--DAGEFDACFAEGPLGMRLEEMPLTSREGGLKYVCQVLQVTS-GGAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 433
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: A0A7R9U3N9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3N9_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.070e-30 Identity = 98/322 (30.43%), Postives = 137/322 (42.55%), Query Frame = 1 Query: 40 KVQRLEGNSVCMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVRRMELGGNGQLRAWFKKCHTENSALEMKYRTKAATLYRDNLRAAADXXXXXXXXXXXXXXXXXXVTARSPERAPVSGKGKGKGRIFVAAERAAADNLARENAEAXXXXXXXXXXXXXXXXXXXXGEHDGTGTAAVSPISASTVDNRTKRPSSERTHGAPSAAVGSATSGALSGMEEQARRCGKDEEYEV--VFGPGGMGFTLMKDAVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGARLHDYDQLMLLLPRAPRPLRLLF 999 +V+RL+GN C+DCG +TSW + G L+C++CAGRHRSLG H++ +++LTMD W A Q +RM LGGN LR++ E LE KY T A YR+ LR A+ V+ + VS + R F E AAA AA+G A A + G+D +V FG G MG L + RA V+ + P G A G+R GD++ GV+G R+ DYD++M L+ R RP+ + F Sbjct: 1 EVKRLKGNERCVDCGAADTSWASVSMGSLICLQCAGRHRSLGVHVSFVRNLTMDNWTAAQAKRMHLGGNALLRSFLTTHQLETLPLESKYTTPQAKFYRERLREEAERQ----------------VSQHGLQALDVSPSTR---RRFRTMESAAA------------------------------------------------------------------AALGDAPEAASRSVTAPGGSSGRDGVQDVWCSFGEGRMGLRLTRAKNMRATVSMITPNGNADVQGLRVGDFVCGVNGKRVGDYDEVMELVQRLKRPVSITF 237
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: A0A4D9D4X6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4X6_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.380e-27 Identity = 106/294 (36.05%), Postives = 136/294 (46.26%), Query Frame = 1 Query: 2959 REHTVVFPEGGMGLTLTKELDGGCSVTKLVPGGVAHSRGVALGQRVCAVNGQPSGTYEQTMAIISGSSRPISITFVMPTDGSGSGGSRLSGAGGGPPLVQQSWADVGLAATIGAMDAANAVAVEWGLGASTPGVLDEVQASVGSIPPPP-QGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDMPTMSTKKALSDTPGLEVGEFDVRFGEGELGMRLEE------RGSFDASSVVVRVTEDAGQAMSLGVREGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRFRAP 3819 RE++VVF EG MGLTL+K G VT + P G A GV +G + +++ Q Y+ MA + RP+ + F +G GS A GGP W G +++ + A G G S + G+ P P G GG G ++TK L+ PG GEFD F EG LGMRLEE G V++VT G A S GVR+GC VVG+NGE+++SHAHTVATLKH KRPV VRFR P Sbjct: 749 REYSVVFGEGPMGLTLSKVEGGRALVTSVAPAGQAVLGGVRVGDALVSLDHQAMALYDLVMARLPSLPRPLVVGFRRRMEGMGS----TERAVGGPRAPGPRWLGSGASSS-----GSGGKAFAGGFGKSLQVLTRHASLGPGTAAAPSLXXXXXXXXXXXXXXPLG--GGSG-------------------LTTKVPLTQDPG--TGEFDAWFAEGPLGMRLEEMPLTSREGGLKYVCQVLQVTS-GGAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 1009
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: A0A7S2XZL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL0_9STRA) HSP 1 Score: 110 bits (274), Expect = 4.470e-24 Identity = 71/141 (50.35%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 3439 MAIPTGVAGGFGNSLAKHRTFAVDVSPD--------------MPTMSTKKALSDTPGLEVGEFDVRFGEGELGMRLEER--GSFDASSVVVRVTEDAGQAMSLGVREGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRFR 3813 MA P VAGGFG +L + + +PD M M+TKK L GLE GE DV FG G LG+RLEER G SVV VTE AGQA GV G T++G+NGE++LSHAHTV+TLKH KRP++VR R Sbjct: 22 MAAPPAVAGGFGKTLNVD-SGDNEANPDSMENAEGSSGGAASMTGMTTKKELGS--GLEDGEVDVTFGPGPLGLRLEERPGGGGAMISVVTSVTE-AGQADKQGVEVGSTIIGLNGEQFLSHAHTVSTLKHGKRPISVRLR 158
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: W7TG24_9STRA (Adp-ribosylation factor gtpase-activating n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG24_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.270e-24 Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 13 GPFPKAAMKKVQRLEGNSVCMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVRRMELGGNGQLRAWFKKCHTENSALEMKYRTKAATLYRDNLRAAAD 360 GPFP + +++ GN+ C DCG +T W TYGIL+C++C+G HRSLG ++ ++SL++D W QV M LG N Q++ +F++ N+ + ++Y++KAA +YR L A + Sbjct: 11 GPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVE 126
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: K8ZBQ6_NANGC (Arf-GAP domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBQ6_NANGC) HSP 1 Score: 108 bits (271), Expect = 1.420e-23 Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 13 GPFPKAAMKKVQRLEGNSVCMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVRRMELGGNGQLRAWFKKCHTENSALEMKYRTKAATLYRDNLRAAAD 360 GPFP + +++ GN+ C DCG +T W TYGIL+C++C+G HRSLG ++ ++SL++D W QV M LG N Q++ +F++ N+ + ++Y++KAA +YR L A + Sbjct: 11 GPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVE 126
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: A0A8J2SXS4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXS4_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.840e-23 Identity = 96/352 (27.27%), Postives = 140/352 (39.77%), Query Frame = 1 Query: 16 PFPKAAMKKVQRLEGNSVCMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVRRMELGGNGQLRAWFKKCHTENSALEMKYRTKAATLYRDNLRAAADXXXXXXXXXXXXXXXXXXVTARSPERAPVSGKGKGKGRIFVAAERAAADNLARENAEAXXXXXXXXXXXXXXXXXXXXGEHDGTGTAAVSPISASTVDNRTKRPSSERTHGAPSAAVGSATSGALSGMEEQARRCGKDEEYEVVFGPGGMGFTLMKDAVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGARLHDYDQLMLLLPRAPRPLRLLFEGAGAALAAPPSSYSTKPAKLGAN 1071 P P A++K++ + GN +C+DC E W +G L C++CAGRHR LG ++V +SLTMD W + M LGGN QLR +F+ ENS +E+ YRTK A+ YR+ L+A T P + D AR+ D + PS +G++ + AL P G+ + + S ALVT++ G A GVR GDY+V ++G DYD+++ L RAPRPLRL G +A + + + A GA+ Sbjct: 18 PLPPNAIEKIRCVPGNDLCLDCRAAEPDWADVQHGSLHCIQCAGRHRGLGVKVSVTRSLTMDNWTEANLLAMLLGGNKQLRTFFETHTIENSDIEVLYRTKQASYYREQLQAQVAKMALQRRKSKSPPPISMPATPEPPPKPD--------------------DGFARD------------------------------------------FDVALRTPS-----------LGASLTRALP--------------------PPGVTSPIQGNG-SMALVTKVVTNGPAHSAGVRVGDYVVALNGRPATDYDEVVALFARAPRPLRLTVRRFGGDASAAGADEAARDAMRGAS 275
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: A0A7S2V5A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A2_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.910e-23 Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 31 AMKKVQRLEGNSVCMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVRRMELGGNGQLRAWFKKCHTENSALEMKYRTKAATLYRDNLRAAAD 360 A K+++++ GN+ C+DC P W TYG +C+ C+G+HRSLG H++ ++S+TMD W Q+R M+ GGN +LR WF++ + ++ AL KY AA LY+D L A + Sbjct: 9 AAKELRQIPGNTTCVDCKAPHPQWASVTYGSFICLDCSGQHRSLGVHMSFVRSVTMDSWSDKQIRMMQCGGNDKLRDWFRQHNIDSLALVPKYHEPAAELYKDRLLAEVE 118
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Match: A0A7R9A6L9_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A6L9_9CRUS) HSP 1 Score: 112 bits (281), Expect = 1.090e-22 Identity = 47/117 (40.17%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 16 PFPKAAMKKVQRLEGNSVCMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVRRMELGGNGQLRAWF--KKCHTENSALEMKYRTKAATLYRDNLRAAAD 360 P +A + +++ +GN++C +CG W TYGIL+C+ C G+HRSLG HL+ ++S+TMD+W ++++M++GGN Q R + + + +S ++ KY TKAA+LYRD + A A+ Sbjct: 4 PQTQATLNELRMHKGNNICFECGACNPQWASITYGILICLDCCGKHRSLGVHLSFVRSITMDKWKEAELKKMKVGGNQQAREFLMSQPDYNHSSPIQQKYNTKAASLYRDKISALAE 120 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig599.14498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig599.14498.1 >prot_L-elsbetiae_contig599.14498.1 ID=prot_L-elsbetiae_contig599.14498.1|Name=mRNA_L-elsbetiae_contig599.14498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1286bp MWEPGPFPKAAMKKVQRLEGNSVCMDCGQPETSWGGPTYGILLCVKCAGRback to top mRNA from alignment at L-elsbetiae_contig599:6570..17938- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig599.14498.1 ID=mRNA_L-elsbetiae_contig599.14498.1|Name=mRNA_L-elsbetiae_contig599.14498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11369bp|location=Sequence derived from alignment at L-elsbetiae_contig599:6570..17938- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig599:6570..17938- >mRNA_L-elsbetiae_contig599.14498.1 ID=mRNA_L-elsbetiae_contig599.14498.1|Name=mRNA_L-elsbetiae_contig599.14498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7716bp|location=Sequence derived from alignment at L-elsbetiae_contig599:6570..17938- (Laminarionema elsbetiae ELsaHSoW15)back to top |