mRNA_L-elsbetiae_contig599.14497.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig599.14497.1
Unique Name	mRNA_L-elsbetiae_contig599.14497.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: D7FT56_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT56_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.420e-63
Identity = 154/286 (53.85%), Postives = 172/286 (60.14%), Query Frame = 3

Query:  255 SAGSLSSALLLRPAH-TPFLAAKRKGLVGLPLGIARQEEERTPADQPVAIEMVASTGRERSKAAQQAYHERKREALSAWSEERQGRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLE---GGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFL 1100
            SAG  S AL   P   TPFL  +R                R P     A   +   G +    A Q+Y+ER+REA+ AW+EER+GRDLCERCRRAR+MCLCSSLP  AMPTSTRFVILQHPAETKKRVTGTVPLVLHCL+NC R+VMR DY E +LRK LGV+            A  RSPE  SE S E      T  PLLLFPCPGAE+LEDIAA+  Q   S+ P  XXXXXXXXXXX                          L+DGTWSQAKQILSRYP L
Sbjct:   47 SAGRNSDALFCCPTTLTPFLTVRR----------------RKPRRAACAAREI---GNDAPSQAVQSYYERRREAMGAWTEERRGRDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRYDYSEQDLRKALGVEV-----------AIYRSPERVSEISSERENSASTGIPLLLFPCPGAEYLEDIAASRDQPAPSAQPFPXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXLVDGTWSQAKQILSRYPSL 295

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: UPI0014027552 (DTW domain-containing protein 2 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014027552)

HSP 1 Score: 71.6 bits (174), Expect = 4.200e-10
Identity = 70/215 (32.56%), Postives = 91/215 (42.33%), Query Frame = 3

Query:  507 RDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLS--NCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAP----------ATSPSTSA-----PLPPSPSGPM----VVLIDGTWSQAKQILSR 1088
            R  C RC R +K+CLC  LP   +  STR  I+QHPAE + RV  TVPL+  CLS  +C  +V R  + ED   ++  V                RSP                L+L+P PGA  L D+  A+    AS+                  A P          A  P+T A     P P S +G +    +VLIDGTW QAK +  R
Sbjct:   66 RATCSRCGRPQKVCLCPFLPAHPLEVSTRLYIVQHPAE-ESRVLRTVPLLAACLSAHSCTVLVGRR-FPEDRFPELAQVC---------------RSPNT--------------LVLYPGPGAVDLYDLVGASSTTCASAARESSGILLGTGDDSPAAAKPGRADALAPCGAVDPTTLADAPRVPTPASVNGAVPLFTLVLIDGTWRQAKDMFER 249

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A7S3RJQ7_EMIHU (tRNA-uridine aminocarboxypropyltransferase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RJQ7_EMIHU)

HSP 1 Score: 68.9 bits (167), Expect = 1.600e-9
Identity = 68/200 (34.00%), Postives = 90/200 (45.00%), Query Frame = 3

Query:  507 RDLCERCRR-ARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFLS 1103
            R +C RCRR AR+ C+C+ LPP  +   TR +ILQHP E++K +   VPL+  C                 LR+   V A    + G    A G  P    +RS+  G    PLLLFP  GA  L D AA   Q  ASS               + ++A   S      L        +VLIDGTWSQA+ ++   P L+
Sbjct:   50 RSVCRRCRRPARQHCVCAELPPAPIAVQTRVLILQHPRESRKAMCS-VPLIPLC-----------------LREAEVVQAPMPFEAGSCFTAEGLEP---LQRSIREGY--EPLLLFPGEGAVPL-DAAAGWPQPRASS---------------KQSSATRRSRERRRKL--------LVLIDGTWSQARAMMRHSPSLA 202

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: R1BXS1_EMIHU (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BXS1_EMIHU)

HSP 1 Score: 68.9 bits (167), Expect = 6.150e-9
Identity = 68/200 (34.00%), Postives = 90/200 (45.00%), Query Frame = 3

Query:  507 RDLCERCRR-ARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFLS 1103
            R +C RCRR AR+ C+C+ LPP  +   TR +ILQHP E++K +   VPL+  C                 LR+   V A    + G    A G  P    +RS+  G    PLLLFP  GA  L D AA   Q  ASS               + ++A   S      L        +VLIDGTWSQA+ ++   P L+
Sbjct:   28 RSVCRRCRRPARQHCVCAELPPAPIAVQTRVLILQHPRESRKAMCS-VPLIPLC-----------------LREAEVVQAPMPFEAGSCFTAEGLEP---LQRSIREGY--EPLLLFPGEGAVPL-DAAAGWPQPRASS---------------KQSSATRRSRERRRKL--------LVLIDGTWSQARAMMRHSPSLA 180

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A7S4KQU0_GUITH (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KQU0_GUITH)

HSP 1 Score: 62.8 bits (151), Expect = 3.500e-7
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 3

Query:  513 LCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 674
            LC RC R  ++C+CSSLP   + +  + +ILQHP E KK+  GTVP+V  CL N
Sbjct:  106 LCHRCLRPARVCICSSLPEEPIESKLKIMILQHPKERKKKTYGTVPIVQLCLKN 159

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A6P7V939_IXOSC (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Ixodes TaxID=6944 RepID=A0A6P7V939_IXOSC)

HSP 1 Score: 60.8 bits (146), Expect = 7.850e-7
Identity = 53/198 (26.77%), Postives = 74/198 (37.37%), Query Frame = 3

Query:  507 RDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFL 1100
            R LC +CRR   +C CSSLP   +P S++  ILQHP E K+ +  T P++   L +   +V+R      E    L       D+G   GD                      L+L+P P AE LED+     +                                         G  +VL+DGTWSQA+ +    P L
Sbjct:   24 RALCNKCRRPPAVCWCSSLPETPVPVSSKVFILQHPGEVKRNLR-TAPMLEAALDSEHCVVLRGRRFSRERHGALNAML-DGDEGPSLGDT---------------------LVLYPGPNAEPLEDLPTVRERG---------------------------------------RGYNLVLLDGTWSQARSLFHNSPHL 159

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A8J4F002_9CHLO (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F002_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 2.190e-6
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 3

Query:  504 GRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 674
            GR  C+RC+R R++CLC+ LP R M    R +ILQHP E KKR+  TVPL+  CL +
Sbjct:   63 GRPTCDRCKRPRRVCLCTVLPVRPMRLLGRILILQHPHELKKRL-ATVPLLKCCLDD 118

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A8J4FVT4_9CHLO (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FVT4_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 2.200e-6
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 3

Query:  504 GRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 674
            GR  C+RC+R R++CLC+ LP R M    R +ILQHP E KKR+  TVPL+  CL +
Sbjct:   54 GRPTCDRCKRPRRVCLCTVLPVRPMRLLGRILILQHPHELKKRL-ATVPLLKCCLDD 109

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A8J4EYZ0_9CHLO (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EYZ0_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 2.390e-6
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 3

Query:  504 GRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 674
            GR  C+RC+R R++CLC+ LP R M    R +ILQHP E KKR+  TVPL+  CL +
Sbjct:   63 GRPTCDRCKRPRRVCLCTVLPVRPMRLLGRILILQHPHELKKRL-ATVPLLKCCLDD 118

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BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: UPI001551B50F (DTW domain-containing protein 2 isoform X4 n=1 Tax=Trachemys scripta elegans TaxID=31138 RepID=UPI001551B50F)

HSP 1 Score: 58.5 bits (140), Expect = 3.400e-6
Identity = 56/191 (29.32%), Postives = 76/191 (39.79%), Query Frame = 3

Query:  516 CERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCL--SNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQIL 1082
            C RC R +K+CLC   P   +  ST   I+QHPAE + RV  TVPL+  CL    C+ ++ R  +GED   K                    R PE+++         S  L+L+P   A  LE++A                                 SPST            +++IDGTWSQAK I 
Sbjct:   46 CGRCSRPQKVCLCPFFPVHPLKVSTCLYIIQHPAE-ESRVLRTVPLLAACLPGDKCKVLIGRR-FGEDRKTKSSLCSC--------------RYPELAAVCR-----NSSTLILYPGAEAANLEELALIF-----------------------------PSPST------------IIIIDGTWSQAKDIF 174

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
D7FT56_ECTSI	1.420e-63	53.85	tRNA-uridine aminocarboxypropyltransferase n=2 Tax...	[more]
UPI0014027552	4.200e-10	32.56	DTW domain-containing protein 2 n=1 Tax=Petromyzon...	[more]
A0A7S3RJQ7_EMIHU	1.600e-9	34.00	tRNA-uridine aminocarboxypropyltransferase (Fragme...	[more]
R1BXS1_EMIHU	6.150e-9	34.00	tRNA-uridine aminocarboxypropyltransferase n=2 Tax...	[more]
A0A7S4KQU0_GUITH	3.500e-7	50.00	tRNA-uridine aminocarboxypropyltransferase n=1 Tax...	[more]
A0A6P7V939_IXOSC	7.850e-7	26.77	tRNA-uridine aminocarboxypropyltransferase n=3 Tax...	[more]
A0A8J4F002_9CHLO	2.190e-6	52.63	tRNA-uridine aminocarboxypropyltransferase n=1 Tax...	[more]
A0A8J4FVT4_9CHLO	2.200e-6	52.63	tRNA-uridine aminocarboxypropyltransferase n=3 Tax...	[more]
A0A8J4EYZ0_9CHLO	2.390e-6	52.63	tRNA-uridine aminocarboxypropyltransferase n=3 Tax...	[more]
UPI001551B50F	3.400e-6	29.32	DTW domain-containing protein 2 isoform X4 n=1 Tax...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig599	contig	L-elsbetiae_contig599:1292..4467 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	221.5
Seed ortholog evalue	6.7e-55
Seed eggNOG ortholog	2880.D7FT56
Hectar predicted targeting category	other localisation
EggNOG free text desc.	DTW
EggNOG OGs	COG3148@1,KOG4382@2759
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-19_003520.1
Exons	4
Model size	1202
Cds size	1116
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig599.14497.1	prot_L-elsbetiae_contig599.14497.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig599 1378..4467 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816649.7879333-UTR-L-elsbetiae_contig599:1291..1377	1622816649.7879333-UTR-L-elsbetiae_contig599:1291..1377	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig599 1292..1377 +
1691683711.9222057-UTR-L-elsbetiae_contig599:1291..1377	1691683711.9222057-UTR-L-elsbetiae_contig599:1291..1377	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig599 1292..1377 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816649.8023973-CDS-L-elsbetiae_contig599:1377..1833	1622816649.8023973-CDS-L-elsbetiae_contig599:1377..1833	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 1378..1833 +
1691683711.93223-CDS-L-elsbetiae_contig599:1377..1833	1691683711.93223-CDS-L-elsbetiae_contig599:1377..1833	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 1378..1833 +
1622816649.815727-CDS-L-elsbetiae_contig599:2530..2616	1622816649.815727-CDS-L-elsbetiae_contig599:2530..2616	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 2531..2616 +
1691683711.942135-CDS-L-elsbetiae_contig599:2530..2616	1691683711.942135-CDS-L-elsbetiae_contig599:2530..2616	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 2531..2616 +
1622816649.828358-CDS-L-elsbetiae_contig599:3141..3394	1622816649.828358-CDS-L-elsbetiae_contig599:3141..3394	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 3142..3394 +
1691683711.9530954-CDS-L-elsbetiae_contig599:3141..3394	1691683711.9530954-CDS-L-elsbetiae_contig599:3141..3394	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 3142..3394 +
1622816649.8394532-CDS-L-elsbetiae_contig599:4146..4467	1622816649.8394532-CDS-L-elsbetiae_contig599:4146..4467	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 4147..4467 +
1691683711.9640107-CDS-L-elsbetiae_contig599:4146..4467	1691683711.9640107-CDS-L-elsbetiae_contig599:4146..4467	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig599 4147..4467 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig599:1292..4467+
coding sequence from alignment at L-elsbetiae_contig599:1292..4467+

protein sequence of mRNA_L-elsbetiae_contig599.14497.1

>prot_L-elsbetiae_contig599.14497.1 ID=prot_L-elsbetiae_contig599.14497.1|Name=mRNA_L-elsbetiae_contig599.14497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=372bp
MSPAGSMCSRRAAAADRKKTITRVVLLQSVILAGTTMTGSGSVTGSGGGS
VACKGWSAGSLSSALLLRPAHTPFLAAKRKGLVGLPLGIARQEEERTPAD
QPVAIEMVASTGRERSKAAQQAYHERKREALSAWSEERQGRDLCERCRRA
RKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRI
VMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTS
RPLLLFPCPGAEFLEDIAAATRQHFASSTPPPPPPPPPPPPPPRPTAAPA
TSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFLSPQKPSVAGPGG
RGLKFSSLGGAPDAGAPSAFPG

mRNA from alignment at L-elsbetiae_contig599:1292..4467+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig599.14497.1 ID=mRNA_L-elsbetiae_contig599.14497.1|Name=mRNA_L-elsbetiae_contig599.14497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3176bp|location=Sequence derived from alignment at L-elsbetiae_contig599:1292..4467+ (Laminarionema elsbetiae ELsaHSoW15)
GGGTTACCATCAGTCCAAGAGCACAGAGAGCCCAGACACCACGCGAGAGA
CACCACAAACCGGTTTAGCACACAGGCGCGAGTCCGATGTCTCCCGCAGG
ATCGATGTGTAGCAGAAGAGCGGCCGCTGCAGATCGCAAGAAGACCATAA
CACGTGTAGTTTTGCTGCAGAGTGTCATCCTCGCCGGGACGACGATGACC
GGCAGCGGAAGCGTCACCGGCAGCGGCGGCGGCAGCGTGGCGTGCAAAGG
TTGGTCAGCAGGAAGCCTCAGCTCCGCCCTCTTGCTCCGACCAGCGCACA
CGCCCTTCCTGGCTGCGAAACGAAAGGGCTTGGTGGGCCTCCCTCTTGGC
ATCGCACGGCAGGAGGAGGAGAGAACACCAGCCGATCAGCCGGTTGCAAT
CGAGATGGTTGCTTCCACCGGGCGTGAGCGATCGAAGGCAGCCCAGCAGG
CATACCACGAGAGGAAGAGAGAGGCGCTAAGTGCGTGGAGCGAGGAAAGG
CAAGGGAGAGACCTGTGTGAGAGGTGCCGAAGGGCCCGAAAGGTGCGACA
ATAACTTGCTGTCGCCACGCCCCCCTCCCCGGCTCCCAGAGAGCAAGAAA
ACAAGAAAACGCGGAGGTTTACTCGTGCACTAAACTGCTGTTGTAGACGC
ATGTGTTGCAGCACGAGCCCGGATGTTTGTTTTTCATCTCGCTCTCAGCG
AGGTGCAGCAGCAGAGCACGGGAGAAGGGCTGCTTCCGAAATGTCTCGTC
GTGCACCGAGGTTGCAGTGTGGGGCTTCGACGGTTCGAAGGTAAGAGGTG
TGTGTGGCAAGATCGACTCTGGTACTCGTCGCTGAACACGGCGCCTGTGC
TCTGCTTCTCCATCAAATCATGCTTGGAGCCGGGACCTACACTGCAGTGA
ATGGTTCAAACGTCAAAAGGAAATAACTAATTGGTACTACATAGATATAA
TCTGCGCGTTTTTTCCACCTTGAAGAAAATTAATTTTTTGTCCATATTTA
GCCCCCGACCGCACGTCTTTATTGTAGCGTTGCCCGCCGCCTACTAGCTG
CACCAGAGATTCAGTCGGTCGGATCGCCGACCGAACAATTCTGCGAGAAC
CAAGGCGCGCTTTCAAGTCGGCGTCCGCTAACAGCGCGCCCCGCTGCCCT
CTGCTTGTTCAAACCCTTTGTCGCGCCCCCACTGCTGTCCCTCTTCCTCC
TGGCGATCCGATTTTTATATTGGGTTGGATGAATCGAAGATGTGCCTGTG
TTCTTCGCTGCCGCCGCGAGCCATGCCGACGTCCACCCGATTCGTCATTT
TGCAGCACCCGGCGGAGACCAAGAAGTAAGCTGGCATGCTTTATTTAGTT
TTGTTTGTGTTGTTCGTGCTGTTCTGTTGCTGCTGTTGTGCTACTGCTGT
GTGTTGTCCCTCCCTCTCCCCTCCCTCAGATATGAGGCTCCCTCAGATAT
GAGGGATGTATGTACCAAGCGCATCAATCACCCCGTCGGTCCTTCGCTGC
TAGTATACCCCCCGCAGATATTTGCCTTATTTTTATTTTATTTTAGTTGG
AGGCATGCAAACTACGGCGGCGGTTTCGACAAAAACACTGCCCACGATCC
CTTGTGCCCCTTTTCGAACGTGTCGCCAAGGAAGGGAGGAGGGGGGGAGG
AGACAACTGGCTCCGTTTTTTATCTTGTTTTACAAAGCGCGCAGAAGCAG
CAGTCAGGGGTCCCCACGGACCGGATGTATCTACTACATAACGTGTAGTC
TACCGTAAGTTTTTCTGACCTCGCAGTGCCAAGCAACACCCCTCCCTGCC
GCGTGCTCTCTCTTTCTCGTCTGTTTCGGAATCTACACCTAAATATGTAG
GCGCGTCACGGGAACGGTTCCGCTGGTCCTCCACTGCCTCAGCAACTGCC
GCCGCATCGTCATGCGCTCCGACTACGGCGAGGACGAGCTGAGAAAAGTC
CTGGGCGTCGACGCCGGCAGCGCCGATGACGGCGGCCAGGCGGGCGACGC
GAGGGGACGCTCTCCAGAAGTTTCTTCGGAACGTTCTTTGGAGGGAGGCG
TTACGAGCAGGCCGCTCCTGCTCTTCCCCTGTCCGGGCGCGGAGTTCCTA
GAGGTGGGACATCCGTGCCAAAGCCCGACATCAGCAAAAAGTAGGCTGTT
TCGTGGTCGTTTTCTCTTTTCTAGCGTCTCTGAAACAATACGGAGTGATG
GTCCTCGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTTTGTTTTGCTTCGGCCCCGTATCGAAGTGTGTTGCCCTCTGTTGTGT
TTTTGTTGTTGTAGTTCTTGGCAAAATGTCGATGCGGGGAATCTCGTGCA
TGTCTGCCGTTGCTTTCTCCTGGCGGGGCTAATGGTTTTGGTCACCGCTG
TCAATTGGGGTGTCCTTAGTCACGTGGGGAGGTACCTATGAAAAAACAGG
AGCGACCGAGCCTCGTCATGCTTGTTGAAGTAGGCGGAATGCATTGGAAG
AGGGCGTAAGAAATCGCACAGTGCTGGCATCATCGCATAAAGTCGCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCTGCCCC
CCCCCCGCACCCATAACTCCACCCTCCCCCTCCCCCCCCACCCCCACCAC
CCACCCNNNNNNNNNNTTGTGAGTGTGCGCGGATGGTTTGAAGTGGGCGC
AAAAAATCCCCCTCCGGGCGGCCATCCGCACAAAGCCCCCCCCCCCCCCC
CCCCCCCCTTTTTCTCCTGGCATTTTTCACACAAAGTTACCAAGTTGAAC
AAGTTTATCCCACTCTCCCACCAAACAAACAACAACGCATCACGCCCGCC
AGCAGGACATCGCCGCCGCCACAAGACAACATTTCGCCTCATCGACACCA
CCACCACCACCACCGCCGCCGCCGCCGCCGCCGCCGCCTCGACCAACAGC
GGCGCCGGCGACAAGTCCGTCGACATCAGCGCCGTTGCCACCGTCTCCAT
CAGGACCGATGGTCGTCCTCATCGACGGGACATGGTCACAAGCGAAGCAG
ATACTGTCGAGGTACCCCTTCCTCAGCCCCCAGAAGCCGTCCGTCGCCGG
TCCGGGGGGGAGGGGGCTGAAGTTTTCTTCTCTCGGCGGCGCCCCCGACG
CCGGCGCTCCATCTGCATTCCCGGGA

Coding sequence (CDS) from alignment at L-elsbetiae_contig599:1292..4467+

>mRNA_L-elsbetiae_contig599.14497.1 ID=mRNA_L-elsbetiae_contig599.14497.1|Name=mRNA_L-elsbetiae_contig599.14497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2232bp|location=Sequence derived from alignment at L-elsbetiae_contig599:1292..4467+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTCCCGCAGGATCGATGTGTAGCAGAAGAGCGGCCGCTGCAGATCG
CAAGAAGACCATAACACGTGTAGTTTTGCTGCAGAGTGTCATCCTCGCCG
GGACGACGATGACCGGCAGCGGAAGCGTCACCGGCAGCGGCGGCGGCAGC
GTGGCGTGCAAAGGTTGGTCAGCAGGAAGCCTCAGCTCCGCCCTCTTGCT
CCGACCAGCGCACACGCCCTTCCTGGCTGCGAAACGAAAGGGCTTGGTGG
GCCTCCCTCTTGGCATCGCACGGCAGGAGGAGGAGAGAACACCAGCCGAT
CAGCCGGTTGCAATCGAGATGGTTGCTTCCACCGGGCGTGAGCGATCGAA
GGCAGCCCAGCAGGCATACCACGAGAGGAAGAGAGAGGCGCTAAGTGCGT
GGAGCGAGGAAAGGCAAGGGAGAGACCTGTGTGAGAGGTGCCGAAGGGCC
CGAAAGATGTCTCCCGCAGGATCGATGTGTAGCAGAAGAGCGGCCGCTGC
AGATCGCAAGAAGACCATAACACGTGTAGTTTTGCTGCAGAGTGTCATCC
TCGCCGGGACGACGATGACCGGCAGCGGAAGCGTCACCGGCAGCGGCGGC
GGCAGCGTGGCGTGCAAAGGTTGGTCAGCAGGAAGCCTCAGCTCCGCCCT
CTTGCTCCGACCAGCGCACACGCCCTTCCTGGCTGCGAAACGAAAGGGCT
TGGTGGGCCTCCCTCTTGGCATCGCACGGCAGGAGGAGGAGAGAACACCA
GCCGATCAGCCGGTTGCAATCGAGATGGTTGCTTCCACCGGGCGTGAGCG
ATCGAAGGCAGCCCAGCAGGCATACCACGAGAGGAAGAGAGAGGCGCTAA
GTGCGTGGAGCGAGGAAAGGCAAGGGAGAGACCTGTGTGAGAGGTGCCGA
AGGGCCCGAAAGATGTGCCTGTGTTCTTCGCTGCCGCCGCGAGCCATGCC
GACGTCCACCCGATTCGTCATTTTGCAGCACCCGGCGGAGACCAAGAAAT
GTGCCTGTGTTCTTCGCTGCCGCCGCGAGCCATGCCGACGTCCACCCGAT
TCGTCATTTTGCAGCACCCGGCGGAGACCAAGAAGCGCGTCACGGGAACG
GTTCCGCTGGTCCTCCACTGCCTCAGCAACTGCCGCCGCATCGTCATGCG
CTCCGACTACGGCGAGGACGAGCTGAGAAAAGTCCTGGGCGTCGACGCCG
GCAGCGCCGATGACGGCGGCCAGGCGGGCGACGCGAGGGGACGCTCTCCA
GAAGTTTCTTCGGAACGTTCTTTGGAGGGAGGCGTTACGAGCAGGCCGCT
CCTGCTCTTCCCCTGTCCGGGCGCGGAGTTCCTAGAGGCGCGTCACGGGA
ACGGTTCCGCTGGTCCTCCACTGCCTCAGCAACTGCCGCCGCATCGTCAT
GCGCTCCGACTACGGCGAGGACGAGCTGAGAAAAGTCCTGGGCGTCGACG
CCGGCAGCGCCGATGACGGCGGCCAGGCGGGCGACGCGAGGGGACGCTCT
CCAGAAGTTTCTTCGGAACGTTCTTTGGAGGGAGGCGTTACGAGCAGGCC
GCTCCTGCTCTTCCCCTGTCCGGGCGCGGAGTTCCTAGAGGACATCGCCG
CCGCCACAAGACAACATTTCGCCTCATCGACACCACCACCACCACCACCG
CCGCCGCCGCCGCCGCCGCCGCCTCGACCAACAGCGGCGCCGGCGACAAG
TCCGTCGACATCAGCGCCGTTGCCACCGTCTCCATCAGGACCGATGGTCG
TCCTCATCGACGGGACATGGTCACAAGCGAAGCAGATACTGTCGAGGTAC
CCCTTCCTCAGCCCCCAGAAGCCGTCCGTCGCCGGTCCGGGGGGGAGGGG
GCTGAAGTTTTCTTCTCTCGGCGGCGCCCCCGACGCCGGCGCTCCATCTG
CATTCCCGGGAGACATCGCCGCCGCCACAAGACAACATTTCGCCTCATCG
ACACCACCACCACCACCACCGCCGCCGCCGCCGCCGCCGCCGCCTCGACC
AACAGCGGCGCCGGCGACAAGTCCGTCGACATCAGCGCCGTTGCCACCGT
CTCCATCAGGACCGATGGTCGTCCTCATCGACGGGACATGGTCACAAGCG
AAGCAGATACTGTCGAGGTACCCCTTCCTCAGCCCCCAGAAGCCGTCCGT
CGCCGGTCCGGGGGGGAGGGGGCTGAAGTTTTCTTCTCTCGGCGGCGCCC
CCGACGCCGGCGCTCCATCTGCATTCCCGGGA