prot_L-elsbetiae_contig598.14484.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig598.14484.1
Unique Nameprot_L-elsbetiae_contig598.14484.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length639
Homology
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: D8LK02_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK02_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 7.410e-117
Identity = 456/641 (71.14%), Postives = 475/641 (74.10%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSRW---ESAGAAPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDRKQDHRRRFDKSSGDDGRGSRGRGAERHGXXXXXXXXXXXXXXXXXXTRRQHGRESNXXXXXXXXXXXDNGSRSRXXXXXXXXXXXXXXSPVRRERGARGKAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALGPAAALLDAKEREKAEREKARAGARKRRVMTPEEKMRRLREMEDDGTRNQELKKQRVEEGRNADARXXXXXXXXXXXXXXXXXXXXXRKSKPVFLDKMRGEQVDGMGLEERMKRNRHYQQRGADVHNFMERG 638
            MSLAFLFKKTWHPSTLQNSE+VWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQ++QDQ+AE++E+LMGKKFEMKDKGT+ELK IEETKAPGTLF AAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXX                XXXXXXXXXXXXXXXXX                             R SRW   ++  AA  G                                       RRR D+  GD     R R +ER         XXXXXXXXXXX            XXXXXXXXX       XXXXXXXXXXXXX  P RRERG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  K+LGPAAALLDAKEREK ++EK RA ARKRR MTPEEKMRRL+EMEDDGTRNQELKKQRV+EGR+ADAR   XXXXXXXXXXXXX      KSKP FLDKMRGEQVD MGLEERMKRNRHYQQRGADVHNFM+RG
Sbjct:    1 MSLAFLFKKTWHPSTLQNSEKVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQSAQDQEAESNEFLMGKKFEMKDKGTSELKTIEETKAPGTLFAAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQLQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDKXXXXXXXXXXHTSGRG--------GSXXXXXXXXXXXXXXXXXRDRGGPRVSDSRGDHRRGSERRSDGASGARASRWGDPDTMAAASGGSGRRGGGDAAGDGRD------------------------RRRTDEWRGDRRGDDRPRSSERGSGNARSERXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPARRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KSLGPAAALLDAKEREKKDKEKVRADARKRRTMTPEEKMRRLKEMEDDGTRNQELKKQRVKEGRHADARGRGXXXXXXXXXXXXXADA---KSKPSFLDKMRGEQVDAMGLEERMKRNRHYQQRGADVHNFMDRG 597          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A6A5AJN6_9STRA (Cir_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AJN6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.040e-27
Identity = 74/164 (45.12%), Postives = 110/164 (67.07%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 163
            MSLAFL KK+WH S L N E+VW AEQK A E K++ E         Q++EL E+QA A G      +R+DWMYEGPM  SQ ++  A+EYL+GK++E K +  ++LKK+     PG+L+ A+ A TA+++F R+NEDP++ ++K +   + S++ NPVKM ++
Sbjct:    1 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEDKKLAEWXXXXXXXXQLKELRELQAKASGTKANTTERVDWMYEGPMAASQREKT-AEEYLLGKEYEEKPE-ESDLKKLASH--PGSLYMASGAGTASDSFSRLNEDPMMFIKKQQKATQLSIMKNPVKMKRI 160          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: W4FXB8_9STRA (Cir_N domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXB8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.410e-26
Identity = 74/164 (45.12%), Postives = 110/164 (67.07%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 163
            MSLAFL KK+WH S L N E+VW AEQK A E K++ E         Q++EL E+QA A G      +R+DWMYEGPM  SQ ++  A+EYL+GK++E K +  ++LKK+     PG+L+ A+ A TA+++F R+NEDP++ ++K +   + S++ NPVKM ++
Sbjct:    1 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEDKKLAEWXXXXXXXXQLKELRELQAKASGTKANTTERVDWMYEGPMAASQREKT-AEEYLLGKEYEEKPE-ESDLKKLASQ--PGSLYMASGAGTASDSFSRLNEDPMMFIKKQQKATQLSIMKNPVKMKRI 160          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A1V9Y7G5_9STRA (Pre-mRNA-splicing factor CWC25 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7G5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.790e-25
Identity = 70/164 (42.68%), Postives = 110/164 (67.07%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 163
            MSLAFL KK+WH S L+N E+VW AEQK A E++++ EL K + EE   +EL E+QA   G    + QR+DWMYEGPM  SQ ++  A++YL+GK+++ + +  NELK++ E   PG+L+     +   + F R+NEDP++ +++ +  A+ +V+ NP KM ++
Sbjct:    1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEEQKLLELRKNIEEEXXXKELRELQAKTTGDKVNQTQRVDWMYEGPMAASQAERT-AEDYLLGKEYKPEAE-KNELKQLSER--PGSLYMGNATSKITDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKRL 160          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A067CZM0_SAPPC (Cir_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZM0_SAPPC)

HSP 1 Score: 116 bits (290), Expect = 8.790e-24
Identity = 69/164 (42.07%), Postives = 106/164 (64.63%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGP-ERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 163
            MSLAFL KK+WH S L+N E+VW AEQK A E+ ++ EL K + E      L EMQA    G  ++ QR+DWMYEGPM  SQ ++  A++YL+GK++    +  N+LK++     PG+L+ +A  +  N+ F R+NEDP++ +++ +  A+ +V+ NP KM  +
Sbjct:    1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEXXXXXXLREMQAKMSGGKVDQTQRVDWMYEGPMAASQTERT-AEDYLLGKEYTPAPE-ENQLKQLAAQ--PGSLYMSAAPSAVNDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHL 160          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A1V9YK09_9STRA (Pre-mRNA-splicing factor CWC25-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YK09_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.610e-23
Identity = 68/164 (41.46%), Postives = 106/164 (64.63%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 163
            MSLAFL KK+WH S L+N E+VW AEQK A E+ ++ EL K            E+QA   G   +  QR+DWMYEGPM  SQ  +  A++YL+GK+++ + +  N+LK++  T  PG+L+ +A  +  N++F R+NEDP++ +++ +  A+ +V+ NP KM K+
Sbjct:    1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNXXXXXXXXXXXELQAKTTGKKLDTTQRVDWMYEGPMAASQTAKT-AEDYLLGKEYKPEAE-QNQLKQLSST--PGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQIAVLKNPAKMKKL 160          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A418AJA2_9STRA (Cir_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AJA2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.080e-23
Identity = 72/168 (42.86%), Postives = 102/168 (60.71%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 167
            MSLAFL KK+WH S L N E+VW AEQK A E                   L E+QA A G      +R+DWMYEGPM  SQ ++  A+EYL+GK++E K +  NELKK+     PG+L+  +   TAN+AF R+NEDP+++ +KA    + S++ NP+KM ++  ++
Sbjct:   24 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEXXXXXXXXXXXXXXXXXXXLRELQAKASGTKANTTERVDWMYEGPMAASQREKT-AEEYLLGKEYEEKPED-NELKKLSSQ--PGSLYMQSGPGTANDAFSRLNEDPMMKQQKA---TQLSIMKNPMKMKRIKEKV 184          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A250XL45_9CHLO (Cir_N domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XL45_9CHLO)

HSP 1 Score: 111 bits (278), Expect = 4.060e-22
Identity = 67/167 (40.12%), Postives = 98/167 (58.68%), Query Frame = 0
Query:    3 LAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGT--NELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 167
            LAFL KK WHP+   N E VW  E   AAE K+ EEL KQ+ EE++  E  +M    GH   R  R+DWMY+G M   +D    A+E+LMGK   +   G    E+ K E+T A  +  T A   + NEA+ R+N DPLL ++K + +  +S+ +NP+KM +++ ++
Sbjct:    7 LAFLAKKPWHPARFSNQEEVWKREAAAAAEAKKAEELRKQLEEERKKNEFIQMAEDAGH-LRRGDRLDWMYQGGMAAKEDAAKRAEEHLMGKAASLAAGGVIPQEMSKCEQTSALPSFMTNATPASQNEAWARLNNDPLLMIKKRQADQLKSIRDNPIKMQQIIQEV 172          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: UPI001B7EAB6F (pre-mRNA-splicing factor CWC25 homolog n=2 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7EAB6F)

HSP 1 Score: 109 bits (273), Expect = 5.650e-22
Identity = 68/168 (40.48%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    8 KKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGK--------KFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 167
            KK+WHP TL+N ERVW AEQK  AE K+IEEL K++R+E+   ++++     G   +R +R+DWMY+GP       Q   +EYL+G+        K+E K+ G +     E    PG++FTA  AT+A +   ++ EDPL  +RK   E ++ V+ NPVKM K+   L
Sbjct:    9 KKSWHPQTLKNIERVWKAEQKHEAECKKIEELQKELRDERAREDIQKYAEDSGAIKKRDERLDWMYQGP-----GGQVNREEYLLGRAIDKQITEKYEEKEAGPSS----ETGLLPGSIFTAGGATSALDMAAKIREDPLFTIRKREEEKKREVLTNPVKMKKIKEML 167          
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: F0WBU6_9STRA (Uncharacterized protein AlNc14C53G4137 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBU6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.680e-22
Identity = 64/167 (38.32%), Postives = 103/167 (61.68%), Query Frame = 0
Query:    1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 167
            MSLAFL KK+WH + L+N E+VWIAEQK AAE K+++EL K +           +QAA G      +R++WMYE PM+    Q+   +EYL+GKK + +  G       + ++  G+L  +    +A E+F R+NEDP+L++++ + E  +S++ NPVKM ++  ++
Sbjct:    1 MSLAFLAKKSWHTANLRNVEKVWIAEQKHAAEGKKLDELRKNIEXXXXXXXXXXLQAAHGDKKAAIERVEWMYEAPMEQ---QEKTTEEYLLGKKLKSEASGQ------QLSEGYGSLGNSNVTNSAYESFSRLNEDPMLQIKRQQKEMHKSILKNPVKMKRIKEKV 158          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK02_ECTSI7.410e-11771.14Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6A5AJN6_9STRA2.040e-2745.12Cir_N domain-containing protein n=1 Tax=Aphanomyce... [more]
W4FXB8_9STRA1.410e-2645.12Cir_N domain-containing protein n=6 Tax=Aphanomyce... [more]
A0A1V9Y7G5_9STRA1.790e-2542.68Pre-mRNA-splicing factor CWC25 n=1 Tax=Thraustothe... [more]
A0A067CZM0_SAPPC8.790e-2442.07Cir_N domain-containing protein n=2 Tax=Saprolegni... [more]
A0A1V9YK09_9STRA1.610e-2341.46Pre-mRNA-splicing factor CWC25-like protein n=1 Ta... [more]
A0A418AJA2_9STRA7.080e-2342.86Cir_N domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A250XL45_9CHLO4.060e-2240.12Cir_N domain-containing protein n=1 Tax=Chlamydomo... [more]
UPI001B7EAB6F5.650e-2240.48pre-mRNA-splicing factor CWC25 homolog n=2 Tax=Aci... [more]
F0WBU6_9STRA5.680e-2238.32Uncharacterized protein AlNc14C53G4137 n=1 Tax=Alb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableCOILSCoilCoilcoord: 164..212
NoneNo IPR availableCOILSCoilCoilcoord: 513..533
NoneNo IPR availablePANTHERPTHR16196CELL CYCLE CONTROL PROTEIN CWF25coord: 1..337
coord: 371..637
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 10..46
e-value: 9.8E-12
score: 55.0
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 11..46
e-value: 2.9E-14
score: 52.9
IPR022209Pre-mRNA splicing factorPFAMPF12542CWC25coord: 66..157
e-value: 2.5E-16
score: 60.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig598contigL-elsbetiae_contig598:29728..34741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig598.14484.1mRNA_L-elsbetiae_contig598.14484.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig598 29728..34910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig598.14484.1 ID=prot_L-elsbetiae_contig598.14484.1|Name=mRNA_L-elsbetiae_contig598.14484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=639bp
MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVR
ELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKD
KGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAE
QSVVNNPVKMSKMMHQLQAELDAKAEKKRAKKEAKKAKKEAKKAKKRNKK
EKEKERQRQKHHHTSGRNGGEDRGQDSDDSRRQQRQQHQQHQHQHQQRER
GERGRDGGGGHAGAHNGTSSSAATRGSRWESAGAAPTGAGGGGGGRTGGH
EDGRRDSRRRDEGRDGRREGTDRKQDHRRRFDKSSGDDGRGSRGRGAERH
GGGGSPPRRQEGGGGGGGGTRRQHGRESNGGGRGRGGSRRDNGSRSRSRS
RSRSRSRSRSRSPVRRERGARGKAEERREQPRRKRSRSSSSSSSSSSSGS
SSDGGGSPRKAKPTAAASHGRSSTNAGGTAEEKRYGLVTGGGSGGGGGGG
GGRKALGPAAALLDAKEREKAEREKARAGARKRRVMTPEEKMRRLREMED
DGTRNQELKKQRVEEGRNADARGRGDGAGAGDERPGGGSGGGGRKSKPVF
LDKMRGEQVDGMGLEERMKRNRHYQQRGADVHNFMERG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019339CIR_N_dom
IPR022209CWC25