|
Homology
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: D8LK02_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK02_ECTSI) HSP 1 Score: 371 bits (952), Expect = 1.890e-116 Identity = 456/641 (71.14%), Postives = 475/641 (74.10%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSRW---ESAGAAPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDRKQDHRRRFDKSSGDDGRGSRGRGAERHGXXXXXXXXXXXXXXXXXXTRRQHGRESNXXXXXXXXXXXDNGSRSRXXXXXXXXXXXXXXSPVRRERGARGKAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALGPAAALLDAKEREKAEREKARAGARKRRVMTPEEKMRRLREMEDDGTRNQELKKQRVEEGRNADARXXXXXXXXXXXXXXXXXXXXXRKSKPVFLDKMRGEQVDGMGLEERMKRNRHYQQRGADVHNFMERG 1914
MSLAFLFKKTWHPSTLQNSE+VWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQ++QDQ+AE++E+LMGKKFEMKDKGT+ELK IEETKAPGTLF AAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX XXXXXXXXXXXXXXXXX R SRW ++ AA G RRR D+ GD R R +ER XXXXXXXXXXX XXXXXXXXX XXXXXXXXXXXXX P RRERG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K+LGPAAALLDAKEREK ++EK RA ARKRR MTPEEKMRRL+EMEDDGTRNQELKKQRV+EGR+ADAR XXXXXXXXXXXXX KSKP FLDKMRGEQVD MGLEERMKRNRHYQQRGADVHNFM+RG
Sbjct: 1 MSLAFLFKKTWHPSTLQNSEKVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQSAQDQEAESNEFLMGKKFEMKDKGTSELKTIEETKAPGTLFAAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQLQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDKXXXXXXXXXXHTSGRG--------GSXXXXXXXXXXXXXXXXXRDRGGPRVSDSRGDHRRGSERRSDGASGARASRWGDPDTMAAASGGSGRRGGGDAAGDGRD------------------------RRRTDEWRGDRRGDDRPRSSERGSGNARSERXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPARRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KSLGPAAALLDAKEREKKDKEKVRADARKRRTMTPEEKMRRLKEMEDDGTRNQELKKQRVKEGRHADARGRGXXXXXXXXXXXXXADA---KSKPSFLDKMRGEQVDAMGLEERMKRNRHYQQRGADVHNFMDRG 597
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A6A5AJN6_9STRA (Cir_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AJN6_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.550e-27 Identity = 74/164 (45.12%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 489
MSLAFL KK+WH S L N E+VW AEQK A E K++ E Q++EL E+QA A G +R+DWMYEGPM SQ ++ A+EYL+GK++E K + ++LKK+ PG+L+ A+ A TA+++F R+NEDP++ ++K + + S++ NPVKM ++
Sbjct: 1 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEDKKLAEWXXXXXXXXQLKELRELQAKASGTKANTTERVDWMYEGPMAASQREKT-AEEYLLGKEYEEKPE-ESDLKKLASH--PGSLYMASGAGTASDSFSRLNEDPMMFIKKQQKATQLSIMKNPVKMKRI 160
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: W4FXB8_9STRA (Cir_N domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXB8_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.810e-26 Identity = 74/164 (45.12%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 489
MSLAFL KK+WH S L N E+VW AEQK A E K++ E Q++EL E+QA A G +R+DWMYEGPM SQ ++ A+EYL+GK++E K + ++LKK+ PG+L+ A+ A TA+++F R+NEDP++ ++K + + S++ NPVKM ++
Sbjct: 1 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEDKKLAEWXXXXXXXXQLKELRELQAKASGTKANTTERVDWMYEGPMAASQREKT-AEEYLLGKEYEEKPE-ESDLKKLASQ--PGSLYMASGAGTASDSFSRLNEDPMMFIKKQQKATQLSIMKNPVKMKRI 160
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A1V9Y7G5_9STRA (Pre-mRNA-splicing factor CWC25 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7G5_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.320e-25 Identity = 70/164 (42.68%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 489
MSLAFL KK+WH S L+N E+VW AEQK A E++++ EL K + EE +EL E+QA G + QR+DWMYEGPM SQ ++ A++YL+GK+++ + + NELK++ E PG+L+ + + F R+NEDP++ +++ + A+ +V+ NP KM ++
Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEEQKLLELRKNIEEEXXXKELRELQAKTTGDKVNQTQRVDWMYEGPMAASQAERT-AEDYLLGKEYKPEAE-KNELKQLSER--PGSLYMGNATSKITDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKRL 160
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A067CZM0_SAPPC (Cir_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZM0_SAPPC) HSP 1 Score: 116 bits (290), Expect = 1.100e-23 Identity = 69/164 (42.07%), Postives = 106/164 (64.63%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGP-ERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 489
MSLAFL KK+WH S L+N E+VW AEQK A E+ ++ EL K + E L EMQA G ++ QR+DWMYEGPM SQ ++ A++YL+GK++ + N+LK++ PG+L+ +A + N+ F R+NEDP++ +++ + A+ +V+ NP KM +
Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEXXXXXXLREMQAKMSGGKVDQTQRVDWMYEGPMAASQTERT-AEDYLLGKEYTPAPE-ENQLKQLAAQ--PGSLYMSAAPSAVNDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHL 160
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A1V9YK09_9STRA (Pre-mRNA-splicing factor CWC25-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YK09_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.930e-23 Identity = 68/164 (41.46%), Postives = 106/164 (64.63%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKM 489
MSLAFL KK+WH S L+N E+VW AEQK A E+ ++ EL K E+QA G + QR+DWMYEGPM SQ + A++YL+GK+++ + + N+LK++ T PG+L+ +A + N++F R+NEDP++ +++ + A+ +V+ NP KM K+
Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNXXXXXXXXXXXELQAKTTGKKLDTTQRVDWMYEGPMAASQTAKT-AEDYLLGKEYKPEAE-QNQLKQLSST--PGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQIAVLKNPAKMKKL 160
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A418AJA2_9STRA (Cir_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AJA2_9STRA) HSP 1 Score: 111 bits (277), Expect = 8.420e-23 Identity = 72/168 (42.86%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQA-AGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 501
MSLAFL KK+WH S L N E+VW AEQK A E L E+QA A G +R+DWMYEGPM SQ ++ A+EYL+GK++E K + NELKK+ PG+L+ + TAN+AF R+NEDP+++ +KA + S++ NP+KM ++ ++
Sbjct: 24 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEXXXXXXXXXXXXXXXXXXXLRELQAKASGTKANTTERVDWMYEGPMAASQREKT-AEEYLLGKEYEEKPED-NELKKLSSQ--PGSLYMQSGPGTANDAFSRLNEDPMMKQQKA---TQLSIMKNPMKMKRIKEKV 184
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: A0A250XL45_9CHLO (Cir_N domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XL45_9CHLO) HSP 1 Score: 111 bits (278), Expect = 5.080e-22 Identity = 67/167 (40.12%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 7 LAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGT--NELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 501
LAFL KK WHP+ N E VW E AAE K+ EEL KQ+ EE++ E +M GH R R+DWMY+G M +D A+E+LMGK + G E+ K E+T A + T A + NEA+ R+N DPLL ++K + + +S+ +NP+KM +++ ++
Sbjct: 7 LAFLAKKPWHPARFSNQEEVWKREAAAAAEAKKAEELRKQLEEERKKNEFIQMAEDAGH-LRRGDRLDWMYQGGMAAKEDAAKRAEEHLMGKAASLAAGGVIPQEMSKCEQTSALPSFMTNATPASQNEAWARLNNDPLLMIKKRQADQLKSIRDNPIKMQQIIQEV 172
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: UPI001B7EAB6F (pre-mRNA-splicing factor CWC25 homolog n=2 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7EAB6F) HSP 1 Score: 109 bits (273), Expect = 6.780e-22 Identity = 68/168 (40.48%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 22 KKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGK--------KFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 501
KK+WHP TL+N ERVW AEQK AE K+IEEL K++R+E+ ++++ G +R +R+DWMY+GP Q +EYL+G+ K+E K+ G + E PG++FTA AT+A + ++ EDPL +RK E ++ V+ NPVKM K+ L
Sbjct: 9 KKSWHPQTLKNIERVWKAEQKHEAECKKIEELQKELRDERAREDIQKYAEDSGAIKKRDERLDWMYQGP-----GGQVNREEYLLGRAIDKQITEKYEEKEAGPSS----ETGLLPGSIFTAGGATSALDMAAKIREDPLFTIRKREEEKKREVLTNPVKMKKIKEML 167
BLAST of mRNA_L-elsbetiae_contig598.14484.1 vs. uniprot
Match: F0WBU6_9STRA (Uncharacterized protein AlNc14C53G4137 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBU6_9STRA) HSP 1 Score: 110 bits (274), Expect = 6.880e-22 Identity = 64/167 (38.32%), Postives = 103/167 (61.68%), Query Frame = 1
Query: 1 MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKDKGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSKMMHQL 501
MSLAFL KK+WH + L+N E+VWIAEQK AAE K+++EL K + +QAA G +R++WMYE PM+ Q+ +EYL+GKK + + G + ++ G+L + +A E+F R+NEDP+L++++ + E +S++ NPVKM ++ ++
Sbjct: 1 MSLAFLAKKSWHTANLRNVEKVWIAEQKHAAEGKKLDELRKNIEXXXXXXXXXXLQAAHGDKKAAIERVEWMYEAPMEQ---QEKTTEEYLLGKKLKSEASGQ------QLSEGYGSLGNSNVTNSAYESFSRLNEDPMLQIKRQQKEMHKSILKNPVKMKRIKEKV 158
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 379.4 |
Seed ortholog evalue | 3.3e-102 |
Seed eggNOG ortholog | 2880.D8LK02 |
Preferred name | CWC25 |
KEGG ko | ko:K07203,ko:K12182 |
KEGG Pathway | ko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04144,ko04145,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04144,map04145,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231 |
KEGG Module | M00408 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007049,GO:0007275,GO:0007530,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0018992,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0040021,GO:0040022,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0046483,GO:0048856,GO:0051321,GO:0070013,GO:0071704,GO:0090304,GO:1901360,GO:1990904 |
EggNOG free text desc. | RNA splicing |
EggNOG OGs | KOG3869@1,KOG3869@2759 |
EC | 2.7.11.1 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko04131 |
Ec32 ortholog description | CBF1-interacting co-repressor CIR, N-terminal domain |
Ec32 ortholog | Ec-06_007650.1 |
Exons | 6 |
Model size | 2086 |
Cds size | 1917 |
Stop | 1 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816648.8785117-CDS-L-elsbetiae_contig598:29727..29895 | 1622816648.8785117-CDS-L-elsbetiae_contig598:29727..29895 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 29728..29895 + |
1691683711.3168414-CDS-L-elsbetiae_contig598:29727..29895 | 1691683711.3168414-CDS-L-elsbetiae_contig598:29727..29895 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 29728..29895 + |
1622816648.8926826-CDS-L-elsbetiae_contig598:30655..30772 | 1622816648.8926826-CDS-L-elsbetiae_contig598:30655..30772 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 30656..30772 + |
1691683711.3283746-CDS-L-elsbetiae_contig598:30655..30772 | 1691683711.3283746-CDS-L-elsbetiae_contig598:30655..30772 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 30656..30772 + |
1622816648.904106-CDS-L-elsbetiae_contig598:31704..31847 | 1622816648.904106-CDS-L-elsbetiae_contig598:31704..31847 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 31705..31847 + |
1691683711.3397882-CDS-L-elsbetiae_contig598:31704..31847 | 1691683711.3397882-CDS-L-elsbetiae_contig598:31704..31847 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 31705..31847 + |
1622816648.9165123-CDS-L-elsbetiae_contig598:32227..32378 | 1622816648.9165123-CDS-L-elsbetiae_contig598:32227..32378 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 32228..32378 + |
1691683711.3489-CDS-L-elsbetiae_contig598:32227..32378 | 1691683711.3489-CDS-L-elsbetiae_contig598:32227..32378 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 32228..32378 + |
1622816648.9304373-CDS-L-elsbetiae_contig598:32854..33943 | 1622816648.9304373-CDS-L-elsbetiae_contig598:32854..33943 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 32855..33943 + |
1691683711.3581257-CDS-L-elsbetiae_contig598:32854..33943 | 1691683711.3581257-CDS-L-elsbetiae_contig598:32854..33943 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 32855..33943 + |
1622816648.9406042-CDS-L-elsbetiae_contig598:34492..34741 | 1622816648.9406042-CDS-L-elsbetiae_contig598:34492..34741 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 34493..34741 + |
1691683711.3691018-CDS-L-elsbetiae_contig598:34492..34741 | 1691683711.3691018-CDS-L-elsbetiae_contig598:34492..34741 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig598 34493..34741 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816648.9509215-UTR-L-elsbetiae_contig598:34741..34910 | 1622816648.9509215-UTR-L-elsbetiae_contig598:34741..34910 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig598 34742..34910 + |
1691683711.3784628-UTR-L-elsbetiae_contig598:34741..34910 | 1691683711.3784628-UTR-L-elsbetiae_contig598:34741..34910 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig598 34742..34910 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig598.14484.1 >prot_L-elsbetiae_contig598.14484.1 ID=prot_L-elsbetiae_contig598.14484.1|Name=mRNA_L-elsbetiae_contig598.14484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=639bp
MSLAFLFKKTWHPSTLQNSERVWIAEQKDAAEKKRIEELTKQVREEQQVR ELEEMQAAGGHGPERKQRIDWMYEGPMQTSQDQQAEADEYLMGKKFEMKD KGTNELKKIEETKAPGTLFTAAPATTANEAFRRVNEDPLLRMRKARMEAE QSVVNNPVKMSKMMHQLQAELDAKAEKKRAKKEAKKAKKEAKKAKKRNKK EKEKERQRQKHHHTSGRNGGEDRGQDSDDSRRQQRQQHQQHQHQHQQRER GERGRDGGGGHAGAHNGTSSSAATRGSRWESAGAAPTGAGGGGGGRTGGH EDGRRDSRRRDEGRDGRREGTDRKQDHRRRFDKSSGDDGRGSRGRGAERH GGGGSPPRRQEGGGGGGGGTRRQHGRESNGGGRGRGGSRRDNGSRSRSRS RSRSRSRSRSRSPVRRERGARGKAEERREQPRRKRSRSSSSSSSSSSSGS SSDGGGSPRKAKPTAAASHGRSSTNAGGTAEEKRYGLVTGGGSGGGGGGG GGRKALGPAAALLDAKEREKAEREKARAGARKRRVMTPEEKMRRLREMED DGTRNQELKKQRVEEGRNADARGRGDGAGAGDERPGGGSGGGGRKSKPVF LDKMRGEQVDGMGLEERMKRNRHYQQRGADVHNFMERG* back to topmRNA from alignment at L-elsbetiae_contig598:29728..34910+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig598.14484.1 ID=mRNA_L-elsbetiae_contig598.14484.1|Name=mRNA_L-elsbetiae_contig598.14484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5183bp|location=Sequence derived from alignment at L-elsbetiae_contig598:29728..34910+ (Laminarionema elsbetiae ELsaHSoW15) ATGTCTCTCGCTTTCTTGTTCAAGAAAACATGGCATCCTTCGACCCTCCA
AAACTCGGAAAGGGTCTGGATTGCAGAGCAGAAAGATGCGGCCGAGAAGA
AGAGGATCGAGGAGCTCACCAAGCAGGTCAGGGAGGAGCAGCAAGTGCGG
GAGCTGGAGGAGATGCAGGTGAGTGCGTGAGTGATTGTGAAAAGAGTGTT
GTTTAGCCGTGCGTGTTGGGGATGTACCGTGTATTTGGTCGTTTTGTTGG
CGTTGGGTATCGGCGTTGTTTTGGCCAGGGTGGTCCACATCAGACAGGCG
TGTGCGGGTCCTGGGACAGGCAGTAGAGGCATTCGCGAGTTTGAGGTGAG
CAAACATATCGGATCAAGTATGGAAACGGCTTGAGCAGGGGGTCGGTTTG
GAGTTAGGGTAAGGGCTGGGAGAAGCCTCCGAAATAGCGGTGGGCTTGAG
GTGCGACAGCGTTTTCAATGCAGCTAATGCCAAATAGGTTCGGACAAAAA
ACTCATCTTGGGCGGAACGCCAAAACGACAGCAGGAACATACACCAACAC
GAATGTCCGGTACAGACAGGAGCAGGAGTTGTTGGTGCAGTAGCTGCGCC
TTTCAGCAGCAGCCGTTGGAGTACCGGACGAAGGGTCACTGGAAGTGGTA
CCATGTAGTTCAGAGGTCCGGCTAGTAGACTTCACCTTTTTTCACTACTC
AGTGGAGTTGTACAACAGTGTACAGCAGTCAGGCCACTTGCAAGGCCTGC
TACTGTTGTTGCTGTGGAGACATCGTACATATAAACCGGCTGATCGTACA
TAAATATTGATAGTCTTCTACGTGTATTTATGGCAAATGTACGACTGATT
ATCCTATTTACCTCGTCCGTGTTGCTACCAACGTTCGAACGACCCACCGT
GGCGGCGGCGGCGGGCGCAAACGCACAGGCCGCTGGCGGCCATGGACCAG
AGCGCAAGCAGCGGATCGACTGGATGTACGAGGGCCCCATGCAGACGTCG
CAGGATCAGCAGGCGGAGGCCGACGAGTACCTCATGGGGAAGAAGGTGCG
TGCAAGTTGATGCAGACTGGGCCGCAGTATTTATGAAGATGTGCGTTTTT
GTAAGATGCGTTGTGTTGCTGTCTTTACAATATGTACATATGCATGAAGA
CCGCGCTCTCTTGACATGGTAAGTATCAGCGTAGTATGGAGTACGTGTGT
GCCCCTGAGTATTCCGTGGGGAACCTTGGCTGTTCAGGGTCACAGCAGCT
TGAAACCGTTGATGTGCCAACATCGTAGGATTGGTAAAGTTCCTTCGCAT
CGTTCTTCGCATATACATAGTTTTAACGCGCAGAAGTAGTAGTAGTATGT
TGTCAAGTTAAAGGGCGTGGTTGTGTTGCTCCTCTACAAGACGCGGATCT
ATAAAAACGTAGATATGTATTTCAATACTCGGGGAGAGGGACCATTCTGT
GTGACCACGGGTCATGACTCCGGCAAAATTTCCTCCGTGGCAAGGGGCCT
CTGGTCTGGTGCTGGCAATATATGTGAAGATGAAAAATAAAATAAAAATA
AAACAAAAAATGATACCGACGCCATTCATCCGTTCAGTGTCTCGCTCGCT
CGTGGGGTATCTGAGAAAGAGCCCTCTCCGACTACCGTAGGTGGCACAAG
ATACCACACCCCCTGGACATATTTTCAAAGCTTGATTCCTCCCCAGCAAG
AAGAGTGTCAGTGCCGAAATGGGTGGCGTTGGAAAGATCTTGGAAAGATC
TAGTCGAGCGCTGTCCGAAAAAATGTCGTTTAGTGCTGACACCTTCGTTA
CGGAGTTATGGAGCTCTAAAATTCAGTCCAGGGGGTGTGGTATCTTGTGT
CACCTACGGTACACGAGTGTCAACCGCGTCGTTTTGTTTCTGCCCCCCGT
TTTGTCCTCTAACGCTTCGTCGCAATTTTTTCACGCGAAACGGCAACGGC
TCTTCTAACGGCGGCGAAACCGAGCAGTTCGAGATGAAGGACAAGGGGAC
AAACGAGCTCAAGAAAATCGAGGAGACCAAGGCGCCCGGCACGCTGTTCA
CCGCCGCCCCCGCCACCACGGCAAACGAGGCCTTTCGCCGCGTTAACGAA
GACCCCCTGCTGCGCATGAGGTGTGTGTGCGCGCGTGTAGGCAGGCGGGC
GAGCTAGAGTTTTATCCGTGTATTTAGGTAGGTACTCGAGTACCTCGCAG
AAGAACTTCTCGGTAATTGTTACTTTTGCTTCGTTTTAGCTGCAGTGGAG
GCATGCTCTGTGTGTGAGCATAAGGACGAGCGGGGTCGGGTTTATAGTGA
GTTAGTTGGCTGTTGTGGAGGGGGGGCTTACGCAGAATTGCTGGCACTGT
AGTGTGCCAACTACTCTGTTTTTTTACGAGCCTGCTTTTATATTCTGTGG
CCTCATGTTCGGTGTCAGTCAACCAATAACCGGCCGATAAATTTCTTGGC
GGATACATGTGTGACCGTGTCATCACCACTCCCGACACAATCGCCAACAG
GAAGGCGCGCATGGAGGCAGAGCAGAGCGTGGTGAACAACCCCGTGAAGA
TGAGCAAGATGATGCACCAGCTGCAGGCGGAGCTGGACGCCAAGGCGGAG
AAGAAGCGGGCCAAGAAGGAGGCGAAGAAAGCTAAAAAGGAAGCTAAGAA
GGTTCGGTCGGCCGTCCCTTTGATTTTCCAGCGGCCTGGTTGTTGTTGCT
GCTGCTGCTGCTGGTGTTGTTGTTCGTTGAACGGGTCGAAAAGATGTGCC
TTCGGGTCTGTTGAAACAAAAACACAGGTTTTATCTTGAGGGGCGGAGAC
GCTAAATCTTGAGACTGCTGTGTTTTATTGCCTGGTTGGGCTCGACATGG
CAGTGCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCGCGCCGCCCCCCGCCCCCCCCACCCNNNNNNNNNNGCAGTC
ACTTTTTCGACTGCGGTTTTGCTGTTCGCGCGCTCCCGCCCCGGCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCGGTACCGGTACCTTTTGCGGAA
TGATATGGCATTAGCGCGTCTGCAAAACGACGCTCTTTGTTGTTAATGAA
TTGTGCTTTTGGTGTTGTTTCTTTAAGGCGAAGAAGAGAAACAAGAAGGA
GAAGGAGAAGGAGAGGCAGCGTCAGAAGCACCACCACACGAGCGGCAGGA
ACGGGGGCGAAGACCGTGGACAAGACTCTGACGATAGCCGCCGGCAGCAG
CGGCAGCAGCACCAGCAACACCAGCACCAGCACCAGCAACGCGAGAGAGG
CGAACGGGGGCGAGACGGGGGCGGCGGCCACGCCGGGGCTCACAACGGCA
CTTCTTCTTCTGCGGCGACACGAGGAAGCCGCTGGGAGAGCGCGGGCGCG
GCACCGACGGGCGCGGGCGGCGGCGGCGGCGGCAGGACGGGCGGACACGA
AGACGGACGCAGGGATAGTAGACGCAGAGATGAGGGGCGGGACGGCCGGC
GGGAGGGGACAGACCGGAAGCAGGACCACCGGCGGCGCTTTGACAAGAGC
AGCGGTGATGACGGGAGGGGCTCGAGGGGGCGGGGGGCGGAGCGTCACGG
GGGAGGCGGCTCCCCCCCCCGCCGCCAAGAAGGAGGAGGAGGAGGAGGAG
GAGGAACGCGCCGGCAACACGGGCGCGAAAGCAACGGTGGTGGCCGGGGG
CGTGGTGGCTCGAGGCGGGACAACGGGAGCAGGTCCCGCAGCAGGAGCAG
GAGTAGGAGTAGGAGCAGGAGCAGGAGCAGGTCGCCGGTGCGGCGGGAGA
GGGGCGCCAGGGGGAAGGCGGAGGAGCGGCGGGAGCAACCGCGACGAAAG
CGCTCTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGTGGCAGTAG
CAGCGACGGTGGTGGCAGTCCGCGCAAAGCCAAACCAACGGCCGCTGCTA
GTCACGGCCGCAGCAGCACCAACGCTGGGGGCACCGCCGAGGAGAAGCGG
TATGGGCTGGTGACGGGGGGCGGTAGCGGTGGCGGCGGCGGCGGCGGCGG
CGGCAGAAAGGCTCTTGGGCCGGCCGCGGCGCTGCTGGACGCCAAGGAGC
GGGAGAAAGCGGAGAGGGAGAAGGCTAGGGCGGGTGCGCGGAAGCGGCGC
GTGATGACTCCGGAGGAGAAAATGCGCCGGCTAAGGGAGATGGAGGACGA
CGGTACCCGCAACCAGGTACATGCGTTTATTCATTTCGCGTTTTTTATGT
ATGGATGTTGCAAACAGAGGGCGTTGTGCTTTGCGCACGGCTACATAGCA
CCCACAATGCTAGACGCTGTAGGATACCTGTTTGCACCCCCCCCCCCCCC
TTGGGATTATTCGCGCGCGACGGTGCTCCCGGTTGTCGTTGTGATCGGTG
TGTGCTGGCGACGGGTGCGACACAACCCCGCCGCCATTTCGCGCGAGCCG
CGCTCCTCCCACTATCCAGTGCTTTGTGGATCCATCTGCGGCCTCCTTCA
ACCGCACGCAGATTCACGCGCCCATTTAGCCACCCCTGTAGGGTGGCGAA
GGTTTACCGTCGAGTTCAGGCACACCAGAGGGCGGAATAACCCCACGGCA
CTATAACTATTTGCCGAGCAAGGTGAAAAGCTACGTCACTCAAGTGCACA
CTGCCTGAGAGATGCGCCATACAACAACGAGCGGCACATGTTGGAAGAGG
CAGCCGTTTCAAAACAACGCCTTCCGTCTCGCTCGTGTCTCTTCTTCGCC
TTTGTTGCCCTCCAGGAGCTGAAGAAGCAGCGCGTGGAGGAGGGGAGGAA
CGCGGACGCGAGAGGGAGAGGCGACGGTGCAGGTGCGGGGGACGAGCGCC
CCGGCGGCGGCAGCGGCGGCGGCGGGAGAAAGTCGAAGCCCGTCTTCCTG
GACAAGATGCGGGGCGAGCAGGTCGACGGCATGGGGCTGGAGGAGCGCAT
GAAGCGCAACAGGCACTACCAGCAGCGTGGCGCCGACGTGCACAACTTCA
TGGAGCGGGGTTGATTTGTGTTGTTGTTGGCGAGGGAGCGGGCCGGGGGC
AGGAGGCGGTGGGGTTGAATGGCACAGGGAGAGATAAGAGAGATGAAGCG
AGAGAGAGAGAGAGTGTGTGAGAAAGAGGGAGAGCATATACATCACGGAT
CTGTCTCGAGAGTTGTTTGTGGTTAACATCGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig598:29728..34910+ >mRNA_L-elsbetiae_contig598.14484.1 ID=mRNA_L-elsbetiae_contig598.14484.1|Name=mRNA_L-elsbetiae_contig598.14484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3834bp|location=Sequence derived from alignment at L-elsbetiae_contig598:29728..34910+ (Laminarionema elsbetiae ELsaHSoW15) ATGTCTCTCGCTTTCTTGTTCAAGAAAACATGGCATCCTTCGACCCTCCA AAACTCGGAAAGGGTCTGGATTGCAGAGCAGAAAGATGCGGCCGAGAAGA AGAGGATCGAGGAGCTCACCAAGCAGGTCAGGGAGGAGCAGCAAGTGCGG GAGCTGGAGGAGATGCAGATGTCTCTCGCTTTCTTGTTCAAGAAAACATG GCATCCTTCGACCCTCCAAAACTCGGAAAGGGTCTGGATTGCAGAGCAGA AAGATGCGGCCGAGAAGAAGAGGATCGAGGAGCTCACCAAGCAGGTCAGG GAGGAGCAGCAAGTGCGGGAGCTGGAGGAGATGCAGGCCGCTGGCGGCCA TGGACCAGAGCGCAAGCAGCGGATCGACTGGATGTACGAGGGCCCCATGC AGACGTCGCAGGATCAGCAGGCGGAGGCCGACGAGTACCTCATGGGGAAG AAGGCCGCTGGCGGCCATGGACCAGAGCGCAAGCAGCGGATCGACTGGAT GTACGAGGGCCCCATGCAGACGTCGCAGGATCAGCAGGCGGAGGCCGACG AGTACCTCATGGGGAAGAAGTTCGAGATGAAGGACAAGGGGACAAACGAG CTCAAGAAAATCGAGGAGACCAAGGCGCCCGGCACGCTGTTCACCGCCGC CCCCGCCACCACGGCAAACGAGGCCTTTCGCCGCGTTAACGAAGACCCCC TGCTGCGCATGAGTTCGAGATGAAGGACAAGGGGACAAACGAGCTCAAGA AAATCGAGGAGACCAAGGCGCCCGGCACGCTGTTCACCGCCGCCCCCGCC ACCACGGCAAACGAGGCCTTTCGCCGCGTTAACGAAGACCCCCTGCTGCG CATGAGGAAGGCGCGCATGGAGGCAGAGCAGAGCGTGGTGAACAACCCCG TGAAGATGAGCAAGATGATGCACCAGCTGCAGGCGGAGCTGGACGCCAAG GCGGAGAAGAAGCGGGCCAAGAAGGAGGCGAAGAAAGCTAAAAAGGAAGC TAAGAAGGAAGGCGCGCATGGAGGCAGAGCAGAGCGTGGTGAACAACCCC GTGAAGATGAGCAAGATGATGCACCAGCTGCAGGCGGAGCTGGACGCCAA GGCGGAGAAGAAGCGGGCCAAGAAGGAGGCGAAGAAAGCTAAAAAGGAAG CTAAGAAGGCGAAGAAGAGAAACAAGAAGGAGAAGGAGAAGGAGAGGCAG CGTCAGAAGCACCACCACACGAGCGGCAGGAACGGGGGCGAAGACCGTGG ACAAGACTCTGACGATAGCCGCCGGCAGCAGCGGCAGCAGCACCAGCAAC ACCAGCACCAGCACCAGCAACGCGAGAGAGGCGAACGGGGGCGAGACGGG GGCGGCGGCCACGCCGGGGCTCACAACGGCACTTCTTCTTCTGCGGCGAC ACGAGGAAGCCGCTGGGAGAGCGCGGGCGCGGCACCGACGGGCGCGGGCG GCGGCGGCGGCGGCAGGACGGGCGGACACGAAGACGGACGCAGGGATAGT AGACGCAGAGATGAGGGGCGGGACGGCCGGCGGGAGGGGACAGACCGGAA GCAGGACCACCGGCGGCGCTTTGACAAGAGCAGCGGTGATGACGGGAGGG GCTCGAGGGGGCGGGGGGCGGAGCGTCACGGGGGAGGCGGCTCCCCCCCC CGCCGCCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAACGCGCCGGCAACA CGGGCGCGAAAGCAACGGTGGTGGCCGGGGGCGTGGTGGCTCGAGGCGGG ACAACGGGAGCAGGTCCCGCAGCAGGAGCAGGAGTAGGAGTAGGAGCAGG AGCAGGAGCAGGTCGCCGGTGCGGCGGGAGAGGGGCGCCAGGGGGAAGGC GGAGGAGCGGCGGGAGCAACCGCGACGAAAGCGCTCTCGCAGCAGCAGCA GCAGCAGCAGCAGCAGTAGCAGTGGCAGTAGCAGCGACGGTGGTGGCAGT CCGCGCAAAGCCAAACCAACGGCCGCTGCTAGTCACGGCCGCAGCAGCAC CAACGCTGGGGGCACCGCCGAGGAGAAGCGGTATGGGCTGGTGACGGGGG GCGGTAGCGGTGGCGGCGGCGGCGGCGGCGGCGGCAGAAAGGCTCTTGGG CCGGCCGCGGCGCTGCTGGACGCCAAGGAGCGGGAGAAAGCGGAGAGGGA GAAGGCTAGGGCGGGTGCGCGGAAGCGGCGCGTGATGACTCCGGAGGAGA AAATGCGCCGGCTAAGGGAGATGGAGGACGACGGTACCCGCAACCAGGCG AAGAAGAGAAACAAGAAGGAGAAGGAGAAGGAGAGGCAGCGTCAGAAGCA CCACCACACGAGCGGCAGGAACGGGGGCGAAGACCGTGGACAAGACTCTG ACGATAGCCGCCGGCAGCAGCGGCAGCAGCACCAGCAACACCAGCACCAG CACCAGCAACGCGAGAGAGGCGAACGGGGGCGAGACGGGGGCGGCGGCCA CGCCGGGGCTCACAACGGCACTTCTTCTTCTGCGGCGACACGAGGAAGCC GCTGGGAGAGCGCGGGCGCGGCACCGACGGGCGCGGGCGGCGGCGGCGGC GGCAGGACGGGCGGACACGAAGACGGACGCAGGGATAGTAGACGCAGAGA TGAGGGGCGGGACGGCCGGCGGGAGGGGACAGACCGGAAGCAGGACCACC GGCGGCGCTTTGACAAGAGCAGCGGTGATGACGGGAGGGGCTCGAGGGGG CGGGGGGCGGAGCGTCACGGGGGAGGCGGCTCCCCCCCCCGCCGCCAAGA AGGAGGAGGAGGAGGAGGAGGAGGAACGCGCCGGCAACACGGGCGCGAAA GCAACGGTGGTGGCCGGGGGCGTGGTGGCTCGAGGCGGGACAACGGGAGC AGGTCCCGCAGCAGGAGCAGGAGTAGGAGTAGGAGCAGGAGCAGGAGCAG GTCGCCGGTGCGGCGGGAGAGGGGCGCCAGGGGGAAGGCGGAGGAGCGGC GGGAGCAACCGCGACGAAAGCGCTCTCGCAGCAGCAGCAGCAGCAGCAGC AGCAGTAGCAGTGGCAGTAGCAGCGACGGTGGTGGCAGTCCGCGCAAAGC CAAACCAACGGCCGCTGCTAGTCACGGCCGCAGCAGCACCAACGCTGGGG GCACCGCCGAGGAGAAGCGGTATGGGCTGGTGACGGGGGGCGGTAGCGGT GGCGGCGGCGGCGGCGGCGGCGGCAGAAAGGCTCTTGGGCCGGCCGCGGC GCTGCTGGACGCCAAGGAGCGGGAGAAAGCGGAGAGGGAGAAGGCTAGGG CGGGTGCGCGGAAGCGGCGCGTGATGACTCCGGAGGAGAAAATGCGCCGG CTAAGGGAGATGGAGGACGACGGTACCCGCAACCAGGAGCTGAAGAAGCA GCGCGTGGAGGAGGGGAGGAACGCGGACGCGAGAGGGAGAGGCGACGGTG CAGGTGCGGGGGACGAGCGCCCCGGCGGCGGCAGCGGCGGCGGCGGGAGA AAGTCGAAGCCCGTCTTCCTGGACAAGATGCGGGGCGAGCAGGTCGACGG CATGGGGCTGGAGGAGCGCATGAAGCGCAACAGGCACTACCAGCAGCGTG GCGCCGACGTGCACAACTTCATGGAGCGGGGTTGAGAGCTGAAGAAGCAG CGCGTGGAGGAGGGGAGGAACGCGGACGCGAGAGGGAGAGGCGACGGTGC AGGTGCGGGGGACGAGCGCCCCGGCGGCGGCAGCGGCGGCGGCGGGAGAA AGTCGAAGCCCGTCTTCCTGGACAAGATGCGGGGCGAGCAGGTCGACGGC ATGGGGCTGGAGGAGCGCATGAAGCGCAACAGGCACTACCAGCAGCGTGG CGCCGACGTGCACAACTTCATGGAGCGGGGTTGA back to top
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