mRNA_L-elsbetiae_contig598.14481.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: D8LJZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ9_ECTSI) HSP 1 Score: 229 bits (584), Expect = 5.120e-69 Identity = 129/195 (66.15%), Postives = 145/195 (74.36%), Query Frame = 1 Query: 1 MARLWCVALLAAAVFVVSDAFISPQARWVPTSMSARQARQRSLSERTTARSLTPTTARKAAASDDE----------APESEPAVPEDLDYYDGLLGQQPGADKAAVGGKGEPVSTSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEEDDAKFGKGRW 555 M RL +ALL FVVSDAF+SP+ARW +++ + + RSL+ AR + TT R AA A ++ AVPEDLDYY GL+G+QPGADKA GK E V+TSDYPIPLPSYLLL LATVVSIAFTGSIFEVTGGHPELGY ATY+IGTLSLP FIFLFYAAIKKGKAEVEEDDAKFGKGRW Sbjct: 1 MTRLSIIALLVLVTFVVSDAFVSPKARWASAAINTNRHQARSLTTPVAAR-VRSTTVRTAATXXXXXXXXXXXXXPAEPAKSAVPEDLDYYSGLIGEQPGADKAPASGKEEAVTTSDYPIPLPSYLLLVLATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPTFIFLFYAAIKKGKAEVEEDDAKFGKGRW 194
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A835YHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHG1_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.770e-24 Identity = 53/73 (72.60%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 322 YPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEEDDAKF 540 YPI P+Y LL+L+TVV+IAF GSIFEV G P LGY TY+IG LSLPGFIFLFYAAIKKG+AE EEDD F Sbjct: 61 YPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDF 133
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A7S2XVJ4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ4_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.710e-14 Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 328 IPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEEDD 531 +PLP+YL L ++ VV+IAF G+IFEV+GG P LG+P T+ I S PGF++LFY ++K+G+ E +ED+ Sbjct: 125 LPLPAYLYLVVSCVVAIAFIGTIFEVSGGKPLLGFPLTWAIMVASGPGFLYLFYCSLKRGQIEEKEDN 192
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A7S2P364_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P364_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 4.700e-14 Identity = 43/94 (45.74%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 259 QQPGADKAAVGGKGEPVSTSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEEDDAKF 540 QQP E YPI LPS +LLA + V++I+ GS+FE+ GG P+LG+ T I L LP +FL YAAI KG AE EE D +F Sbjct: 20 QQPAXXXXXXXXXXEEEELQAYPIDLPSPILLATSMVLAISSIGSLFELAGGTPKLGFAVTAAITALGLPISVFLIYAAILKGSAETEEADREF 113
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A2V3IZS2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS2_9FLOR) HSP 1 Score: 76.3 bits (186), Expect = 4.850e-13 Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 325 PIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEED 528 PI PS +LL ++V++IA G +FE+TGGHP G+ T I T+SLP F+FLFYAAIKKG+ E ED Sbjct: 58 PINAPSGVLLLSSSVLAIAAIGCVFELTGGHPTYGFNVTAGILTVSLPSFLFLFYAAIKKGQIEALED 125
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A5J4YIY8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIY8_PORPP) HSP 1 Score: 76.3 bits (186), Expect = 5.240e-13 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 292 GKGEPVSTSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEE 525 G+ V ++ PI LPS +LL ++V++IA GS+FE++ GHP+ G P T I S PGF+F+F+A ++KGKAE E Sbjct: 52 GRARLVMSNGPPINLPSGVLLMFSSVLAIASVGSVFELSSGHPQYGTPVTAAILAASFPGFLFMFWATLQKGKAEESE 129
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A6T6GAQ8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6GAQ8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 6.810e-13 Identity = 36/80 (45.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 313 TSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEEDDAKFGKGR 552 T++YP+ +PS LLLA + ++ I TG +FE+TG +LG+ AT + +S+P +FLFYA+I K AE EEDD ++ +G+ Sbjct: 113 TTEYPLDVPSPLLLASSMILGIIGTGCVFELTGDAEQLGFAATAALTVVSIPTCLFLFYASILKATAETEEDDRRYMEGK 192
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A7S4JDB9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JDB9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.280e-12 Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 319 DYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEEDDAKF 540 +YP+ +PS LLL + +++IA GSIFE++GG+P G T I + LP +FLFYAAI KG AE EEDD F Sbjct: 89 NYPLNVPSPLLLGSSMILAIASIGSIFELSGGNPSNGVGPTAAIAAIGLPTCLFLFYAAIMKGIAETEEDDKAF 162
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: M2XU10_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XU10_GALSU) HSP 1 Score: 75.1 bits (183), Expect = 2.310e-12 Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 313 TSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAE 516 +S P+ +PS +LL ++ V++IAF GSIFE++ GHP+ G T VI SLP F+FLFYAAI+KGK E Sbjct: 77 SSKPPLNVPSGILLGVSCVLAIAFVGSIFELSSGHPQYGRELTSVILVSSLPSFLFLFYAAIQKGKDE 144
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Match: A0A7S0BY63_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY63_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.550e-12 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 325 PIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYPATYVIGTLSLPGFIFLFYAAIKKGKAEVEEDDAKFGKGR 552 P+ +PS LLL + +++IA GS+F++ GG P+LG+P T I T+ ++ FY AI KG +E EEDD KF K R Sbjct: 52 PLNIPSPLLLGSSMILAIAGVGSMFDIAGGSPQLGFPLTESIATVGTTISLYFFYCAILKGISETEEDDEKFNKDR 127 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig598.14481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig598.14481.1 >prot_L-elsbetiae_contig598.14481.1 ID=prot_L-elsbetiae_contig598.14481.1|Name=mRNA_L-elsbetiae_contig598.14481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp MARLWCVALLAAAVFVVSDAFISPQARWVPTSMSARQARQRSLSERTTARback to top mRNA from alignment at L-elsbetiae_contig598:10161..13134- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig598.14481.1 ID=mRNA_L-elsbetiae_contig598.14481.1|Name=mRNA_L-elsbetiae_contig598.14481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2974bp|location=Sequence derived from alignment at L-elsbetiae_contig598:10161..13134- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig598:10161..13134- >mRNA_L-elsbetiae_contig598.14481.1 ID=mRNA_L-elsbetiae_contig598.14481.1|Name=mRNA_L-elsbetiae_contig598.14481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1116bp|location=Sequence derived from alignment at L-elsbetiae_contig598:10161..13134- (Laminarionema elsbetiae ELsaHSoW15)back to top |