prot_L-elsbetiae_contig5974.14471.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5974.14471.1
Unique Nameprot_L-elsbetiae_contig5974.14471.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length773
Homology
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI)

HSP 1 Score: 1478 bits (3827), Expect = 0.000e+0
Identity = 740/763 (96.99%), Postives = 747/763 (97.90%), Query Frame = 0
Query:   11 YFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 773
            Y +G+QHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA           KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSG NVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRG+GDMAVLSAESFERPARENTAGMKHGNYDKLE+DGLVAPGTRVSGTDVLIGKTTPLGGG   +GVTGGPG+RSKKDSSTVMRSHEDGIVDRVML+TNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG
Sbjct:  335 YAKGTQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEEDGLVAPGTRVSGTDVLIGKTTPLGGG--VAGVTGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 1084          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA)

HSP 1 Score: 1190 bits (3079), Expect = 0.000e+0
Identity = 583/765 (76.21%), Postives = 661/765 (86.41%), Query Frame = 0
Query:   11 YFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDL--HDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 773
            Y +G +HS++ GG IR  LPY+RTDVP+VL+FRALG+ NDK ILEHIVYDFSD +MMEKFRPSLEEADVIQ++ +A DFIGKRGSA NVGRNERI YAKGLLQ+E LPHVG    +E KK FFLGY+VHKLLMCSLGRLEEDDRDHYGKKRLDLAG L+AGLFR              Q CLD+G  FV+G AIKS  IT+GL+YSLATGNWGD+KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA           KPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVGC+LSPILEFLEEWA ENL+EI+P  IA+  CTK+FVNGNW+G+HR+PN+LV+TLV QRR LDID EVSVVRDIK RELRLYTDAGR+CRPLFVV+NN+L IRK HI+DL  +   Y WT+LMQ GVVEY+DTEEEETTM+AM+P DL   GGYS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+YASNYQ+RMDTLAHVLHYP KPLV TR+MEHLHFRELPSGVNV+V IM Y+GYNQEDSLIMNQSA+DRGLFRSS+FR++ D+EKAG G+G+MA+LSAE FERP ++  +G + G+YDKL+ DGLV+PGTRVSG+D++IGKTTPL  GG A G+T G    SK+DSST M++HE G +D+VML+TNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMP+S++GI PD+I+NPHAIPSRMTIA LIE L+GK G
Sbjct:  246 YVKGPKHSQIAGGQIRTTLPYVRTDVPIVLIFRALGFVNDKTILEHIVYDFSDAEMMEKFRPSLEEADVIQSRTLALDFIGKRGSAANVGRNERIQYAKGLLQKEVLPHVGTDEASETKKGFFLGYVVHKLLMCSLGRLEEDDRDHYGKKRLDLAGPLVAGLFRTXXXXXXXXXXXXXQKCLDEGRGFVLGVAIKSNTITNGLRYSLATGNWGDQKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGCALSPILEFLEEWATENLEEISPSTIAEKQCTKIFVNGNWIGIHREPNQLVRTLVIQRRCLDIDAEVSVVRDIKERELRLYTDAGRICRPLFVVQNNKLVIRKSHIHDLVSNPEEYNWTSLMQAGVVEYVDTEEEETTMIAMDPSDLAAGGGYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYASNYQVRMDTLAHVLHYPMKPLVCTRSMEHLHFRELPSGVNVVVAIMCYTGYNQEDSLIMNQSAIDRGLFRSSYFRSIVDKEKAGSGVGEMALLSAEQFERPNKDQCSGSRSGSYDKLDADGLVSPGTRVSGSDIIIGKTTPLAQGG-AGGLTAGVNRFSKRDSSTAMKAHESGTIDQVMLTTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPFSVEGITPDLIINPHAIPSRMTIAHLIETLMGKFG 998          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: F0YIN3_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN3_AURAN)

HSP 1 Score: 1062 bits (2746), Expect = 0.000e+0
Identity = 531/758 (70.05%), Postives = 615/758 (81.13%), Query Frame = 0
Query:   22 GGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEN---NRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKT---TPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 773
            G  IR  LPYIR DVPV++VFRALG+  D+ ILEH+VYDFSDT+MME+ RPSL+EA V+QNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG    ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V  YLQ C+D+G  F + +AIKS+ ITDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA           KPRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG   SPILEFLEEW+MENL+EI+P  IA    TK+FVNG+WVGVHRDP+ L  TL   RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL ++       LR+RK HI  L +   GWT L+ +G+VE +DTEEEETTM+AM P DL E+  YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q RMDTL+HVLHYP+KPL TTRAMEHLHFRELPSGVN IV IM Y+GYNQEDSLIMNQ+A+DRGLFRS+F+RT  DQE   RG+G+      E+FERP R+    M+HG+YDK++ DGLVAPG RVSG D+LIGKT   TPLG  G  +         +K+DSST MR +E G+VD+VMLSTNQEG KF KVR R +R+PQIGDKFASRHGQKGTIGMTY QEDMPW+ DG+ PDI+VNPHAIPSRMTI  L+ECL  KVG
Sbjct:  204 GNQIRMTLPYIRVDVPVIIVFRALGFVADRDILEHVVYDFSDTEMMEQLRPSLDEAFVVQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEGRDFNLASAIKSRVITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRIYTDAGRVCRPLLIISKFSRQELRLRKSHIQKLVNGELGWTQLLVKGLVELVDTEEEETTMIAMVPSDLNET--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQRMDTLSHVLHYPQKPLATTRAMEHLHFRELPSGVNAIVAIMCYTGYNQEDSLIMNQAAIDRGLFRSTFYRTYVDQESI-RGLGE---AFHETFERPTRDQCTAMRHGSYDKVDCDGLVAPGLRVSGADILIGKTAPTTPLGMDGNLNHCQ-----FTKQDSSTAMRPNESGLVDQVMLSTNQEGMKFTKVRTRTIRIPQIGDKFASRHGQKGTIGMTYSQEDMPWTRDGVSPDIVVNPHAIPSRMTIGHLVECLQSKVG 939          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: B8C598_THAPS (DNA-directed RNA polymerase subunit beta n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C598_THAPS)

HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0
Identity = 523/769 (68.01%), Postives = 622/769 (80.88%), Query Frame = 0
Query:   12 FQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLH-----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGG--YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 773
            +Q      + G  IR+ LPYIRTD+PVV++FRALGY  D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG     E KK FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LFRKLT++VRK+LQ CLD+G  F +G AIKS  I+DGLKYSLATGNWGDK   +KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQA           KPRQLHN+HWG +CPAETPEGQAVGLVKN+ALMAYI+ G S  P++EFLEE++ ENL +I P +IA+ N  K+FVNGNWVG+HRDP +LV T    RR +DID EVS+VRDI   E+R+YTDAGR+CRPLF+V +  L I+K HI+ L           WT+L+ +G+VEY+DTEEEETTM+AMEPKDL+ + G  YS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVNV+V IM+Y+GYNQEDSLIMNQSA+DRGLFRSS++R  NDQEK+   +G +  L++E FERPA +N  GMK G+Y KL+DDGLV+PGTRVSG DVLIGKT P+        +   P   +K+D ST M+++E+GIVD V++ST +EG++F KVRIRNVR+PQ+GDKFASRHGQKGTIGMTYRQEDMP++ +GIVPDIIVNPHAIPSRMTIAQLIEC+LGKV 
Sbjct:  251 YQKGGKGAIEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQKQEVALDFIGRRGSARDVTKDDRIRYAAGILQKEVLPHVGTEEHCETKKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHISDGLKYSLATGNWGDKGNTSKAGVSQVLNRLTYASSLSHLRRSNTPLARTGKQA-----------KPRQLHNSHWGMVCPAETPEGQAVGLVKNMALMAYITTGTSQVPVMEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKQLVHTFRSLRRMIDIDAEVSIVRDIPESEVRIYTDAGRICRPLFIVTDQELAIKKHHISQLQGVSPDQKKLTWTDLLMEGLVEYVDTEEEETTMIAMEPKDLDMTVGEPYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNVVVAIMIYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYNDQEKSS-SVGSVGALNSEFFERPAFDNCKGMKTGDYGKLDDDGLVSPGTRVSGDDVLIGKTAPM------DAIANTPSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKVRIRNVRIPQVGDKFASRHGQKGTIGMTYRQEDMPFTCEGIVPDIIVNPHAIPSRMTIAQLIECILGKVA 1001          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A1E7ERG7_9STRA (DNA-directed RNA polymerase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7ERG7_9STRA)

HSP 1 Score: 1060 bits (2742), Expect = 0.000e+0
Identity = 526/766 (68.67%), Postives = 618/766 (80.68%), Query Frame = 0
Query:   12 FQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDK-KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLH----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 772
            +Q      + G  IR+ LPYIRTDVPVV++FRALGY  D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA  +LQ+E LPHVG+    E KK FF+GY VHKLL C LGR EEDDRDH+GKKRLDLAG LL GLFR LFRKLT +VR++LQ CLD+G  F +G AIKS  +TDGLKYSLATGNWGDK  +A KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQA           KPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYI+ G +  P++EFLEE++ ENL +I P ++A+ N  K+FVNGNWVGVHRDP  LV T    RR +DID EVS+VRDI  +E+R+YTDAGR+CRPLFVV+  +L I+K+HI  L     +    WT+L+ +G+VEYIDTEEEETTMVAM+P DL     YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVN IVGI+VY+GYNQEDSLIMNQSA+DRGLFRSS++R   DQEKA   +G +  L++E FE+P ++ T GMKHG Y KL++DGLVAPGTRVSG D+LIGKT P+         T  P   +K+D ST M+++E+GIVD V++ST +EG++F KVRIRNVR PQ+GDKFASRHGQKGTIGMTYRQEDMP++++GIVPDIIVNPHAIPSRMTIAQLIECLLGKV
Sbjct:  251 YQKGGRGAIEGNQIRSTLPYIRTDVPVVVIFRALGYVADRDIIEHVVYDLTDGEMMDMFRPSLEEAFVIQRQEVALDFIGRRGSARDVTKDDRIRYASAILQKEVLPHVGVEEHCETKKGFFIGYAVHKLLSCKLGRAEEDDRDHFGKKRLDLAGPLLGGLFRLLFRKLTLDVRRHLQRCLDEGKHFNIGAAIKSNHVTDGLKYSLATGNWGDKGASAPKAGVSQVLNRLTYASSLSHLRRCNTPLARTGKQA-----------KPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPVMEFLEEFSTENLTDILPSVVAEPNTCKIFVNGNWVGVHRDPRALVDTFRSLRRMVDIDAEVSIVRDIAAKEVRIYTDAGRICRPLFVVQEQQLVIKKQHIMQLQGLSGEKKLTWTDLLMEGIVEYIDTEEEETTMVAMDPVDLNADESYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGILVYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYIDQEKAS-SVGTLGTLNSEIFEKPTQDKTRGMKHGEYGKLDEDGLVAPGTRVSGDDILIGKTAPM------DSSTNMPSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKVRIRNVRTPQVGDKFASRHGQKGTIGMTYRQEDMPFTVEGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 998          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: F0YGN2_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGN2_AURAN)

HSP 1 Score: 1059 bits (2739), Expect = 0.000e+0
Identity = 526/766 (68.67%), Postives = 614/766 (80.16%), Query Frame = 0
Query:   22 GGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEN--------------NRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 773
            G  IR  LPY+R DVPV++VFRALG+  D+ ILEH+VYDFSDT+MME+ RPSL+EA VIQNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG    ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V  YLQ C+D G  F + +AIKS+ +TDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA           KPRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG   SPILEFLEEW+MENL+EI+P  IA    TK+FVNG+WVGVHRDP+ L  TL   RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL +VE                 LR+RK H+  L + + GWT L+ +G+VE IDTEEEET M+AM P DL E   YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q RMDTL+HVLHYP+KPL TTRAMEHLHFRELPSGVN IV IM Y+GYNQEDSLIMNQ+A+DRGLFRS+F+RT +D+E   +GI D      E+FERP R+    M+HG+Y+K++ DGLV+PG RVSG+D+L+GKT+P       SG+       SK+DSST MR +E G+VD+VMLSTNQ+G KF KVR R +R+PQIGDKFASRHGQKGTIGMTY QEDMPW+ DG+ PDIIVNPHAIPSRMTI  L+ECL  KVG
Sbjct:  301 GNQIRVTLPYVRVDVPVIVVFRALGFVADRDILEHVVYDFSDTEMMERLRPSLDEAFVIQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDDGRDFNLASAIKSRVVTDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVEAASTVTRVRSQEATFQELRLRKSHVQKLVNGDLGWTQLLVKGLVELIDTEEEETAMIAMIPSDLNEP--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQRMDTLSHVLHYPQKPLATTRAMEHLHFRELPSGVNAIVAIMCYTGYNQEDSLIMNQAAIDRGLFRSTFYRTYSDKEH-NKGIWDSPEYLQETFERPNRDECTAMRHGSYEKIDSDGLVSPGVRVSGSDILVGKTSPSW----HSGLKAERSGPSKRDSSTTMRPNESGLVDQVMLSTNQDGMKFTKVRTRTIRIPQIGDKFASRHGQKGTIGMTYAQEDMPWTRDGVSPDIIVNPHAIPSRMTIGHLVECLQSKVG 1048          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A8J2SZW4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZW4_9STRA)

HSP 1 Score: 1053 bits (2724), Expect = 0.000e+0
Identity = 529/780 (67.82%), Postives = 618/780 (79.23%), Query Frame = 0
Query:   22 GGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENN------------------RLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQ----------EDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 773
            G  IR  LPY+R D+PV++VFRALG+  D+ ILEH+VYDFSDTDMME+ RPSL+EA V+QNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG    ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V  YLQ C+D+   F + +AIKS+ ITDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA           KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAY+SVG   SPILEFLEEW+MENL+EI+P  IA    TK+FVNG+W+GVHRDP  L  TL   RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL +VE++                  +L++RK HI+ L +   GWT L+ +G+VE +DTEEEE TM+AM P DL E   YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q RMDTLAHVLHYP+KPL TTRAMEHLHFRELPSGVN IV IM Y+GYNQ           DSLIMNQ+A+DRGLFRSSF+RT  DQE++    GD A L  E+FERP +++   M+HG+Y+K++ DGLV+PG RVSG D+LIGKT P+  GG  SG+        K+DSST MR +E G+VD+VMLSTNQ+G KF KVR R+VR+PQIGDKFASRHGQKGTIGMTY QEDMPW+ +GI PDIIVNPHAIPSRMTI  L+ECL  KVG
Sbjct:  300 GNQIRMTLPYVRVDIPVIIVFRALGFVADRDILEHVVYDFSDTDMMERLRPSLDEAFVVQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEARDFNLASAIKSRLITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWIGVHRDPCTLEATLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVESDHASTWKDPLNHSSSSPAQKLKLRKPHIHKLVNGELGWTQLLVKGLVELVDTEEEEATMIAMIPSDLNEP--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQRMDTLAHVLHYPQKPLATTRAMEHLHFRELPSGVNAIVAIMCYTGYNQAPSSALSSLKSDSLIMNQAAIDRGLFRSSFYRTYVDQERS-HVTGDAAGLYCETFERPGQDHCVAMRHGSYEKVDCDGLVSPGVRVSGADILIGKTVPVLNGGETSGLV-------KRDSSTAMRPNESGLVDQVMLSTNQDGMKFTKVRTRSVRIPQIGDKFASRHGQKGTIGMTYAQEDMPWTRNGISPDIIVNPHAIPSRMTIGHLVECLQSKVG 1058          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A7S3PZE7_9STRA (DNA-directed RNA polymerase subunit beta n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3PZE7_9STRA)

HSP 1 Score: 1051 bits (2719), Expect = 0.000e+0
Identity = 532/769 (69.18%), Postives = 618/769 (80.36%), Query Frame = 0
Query:   12 FQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDK-KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVV-ENNRLRIRKKHINDLH-----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNR-SKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 772
            +Q      + G  IR+ LPYIRTD+PVV++FRALGY  D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG     EA+K FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LF KLT++VRK+LQ CLD+G  F +G AIKS  ITDGLKYSLATGNWGDK  +A KAGVSQVLNRLTYASALSHLRR NTPL R GKQA           KPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYI+ G + +PILEFLEE++ ENL +I P +IA+ N  K+FVNGNWVG+HRDP  LV T    RR +DID EVS+VRDI   E+R+YTDAGR+CRPLFVV E+  + I+K HI  L           W++L+  G+VEY+DTEEEET M+AMEPKDL +S  YSSTYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVN IV IMVY+GYNQEDSLI+NQSA+DRGLFRSS++R  NDQEKA   +G +  L+AE FE+P  ++  GMKHG Y KL+DDGLV PGTRVSG D+LIGKT PL         T G  +R +K+D ST M+++E+GIVD VM+ST +EG++F KVRIRNVR+PQIGDKFASRHGQKGTIGM YRQEDMP++ +GIVPDIIVNPHAIPSRMTIAQLIECLLGKV
Sbjct:  287 YQKGGKGAIEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQRQDVALDFIGRRGSAKDVTKDDRIRYASGILQKEVLPHVGTEENCEARKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFSKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHITDGLKYSLATGNWGDKGASAPKAGVSQVLNRLTYASALSHLRRCNTPLARTGKQA-----------KPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQAPILEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKTLVDTFRSLRRVVDIDAEVSIVRDIPEAEVRIYTDAGRICRPLFVVTEDQEMAIKKHHILQLQGVLQDQKKLSWSDLLMDGLVEYVDTEEEETAMIAMEPKDLGDS--YSSTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVAIMVYTGYNQEDSLILNQSAIDRGLFRSSYYRCYNDQEKAS-SVGTIGSLTAEKFEKPLFDSCRGMKHGEYGKLDDDGLVQPGTRVSGDDILIGKTAPLD-------STAGMASRFTKRDCSTSMKANENGIVDNVMVSTTKEGYRFTKVRIRNVRIPQIGDKFASRHGQKGTIGMNYRQEDMPFTAEGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 1034          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A7S1FRA3_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRA3_9STRA)

HSP 1 Score: 1048 bits (2709), Expect = 0.000e+0
Identity = 526/768 (68.49%), Postives = 620/768 (80.73%), Query Frame = 0
Query:   13 QGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENN--RLRIRKKHINDLHDPNYG---WTNLMQQGVVEYIDTEEEETTMVAMEPKDLEES---GGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 772
            +G   + + G  IR  LPYIRTDVP+V+VFRALGY  D+ I+EH+VYD +D +MM+ FRPSLEE+ VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG  AG E+KK +FLGY VHKLLMC LGR  EDDRDH+GKKR+DLAG LL GLFR LFRKLT++VR++LQ CL++   F +G AIKS  ITDGLKYSLATGNWGDK ++ KAGVSQVLNRLTYAS LSHLRR+NTPL R GKQA           KPRQLHN+HWG +CPAETPEGQAVGLVKNLALMAYI+ G +  P+LEFLEE++ ENL ++ P +IA+ + +K+FVNGNWVG+HRDP  LV+     RR +DID EVS+VRDI   E+R+YTDAGR+CRPLFVV++   R+ + K  I  L D       W +L+  G+VEYIDTEEEETTM+AMEPKDLEES   GGYSSTYTHCEIHP+MILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVN IVGIM+Y+GYNQEDSLI+NQSA+DRGLFRSS+FR  +DQEK   G G    L++E+FERP  +N  GMKHG Y KL++DGLV PG+RVSG D+LIGKT PL      + V   P   +K+D ST M+S ++GIVD VM+ST +EG++F KVRIRN R+PQIGDKFASRHGQKGTIGMTYRQEDMP+S +GIVPDIIVNPHAIPSRMTIAQLIECLLGKV
Sbjct:  302 RGVDGAGIEGNQIRTTLPYIRTDVPIVVVFRALGYVADRDIIEHVVYDLTDGEMMDIFRPSLEESYVIQRQDVALDFIGRRGSAKDVTKDDRIRYASGILQKEMLPHVGTEAGCESKKGYFLGYAVHKLLMCRLGRANEDDRDHFGKKRIDLAGPLLGGLFRVLFRKLTKDVRRHLQRCLEESRHFNLGAAIKSNHITDGLKYSLATGNWGDKGSSAKAGVSQVLNRLTYASTLSHLRRMNTPLARTGKQA-----------KPRQLHNSHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPVLEFLEEFSTENLTDVLPSVIAEPSVSKIFVNGNWVGIHRDPKSLVKQCRSLRRMVDIDAEVSIVRDINESEVRIYTDAGRICRPLFVVDDREQRMVVTKSDIARLQDEGGNRATWNDLLMNGIVEYIDTEEEETTMIAMEPKDLEESRRGGGYSSTYTHCEIHPAMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGIMIYTGYNQEDSLILNQSAIDRGLFRSSYFRCYSDQEK---GSGASNPLNSETFERPLHDNCRGMKHGEYGKLDEDGLVQPGSRVSGEDILIGKTAPLE----TNSVM--PSRYTKRDCSTPMKSTDNGIVDNVMISTTKEGYRFTKVRIRNTRIPQIGDKFASRHGQKGTIGMTYRQEDMPFSAEGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 1049          
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A024TRP0_9STRA (DNA-directed RNA polymerase subunit beta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRP0_9STRA)

HSP 1 Score: 1043 bits (2696), Expect = 0.000e+0
Identity = 522/769 (67.88%), Postives = 622/769 (80.88%), Query Frame = 0
Query:   11 YFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHD---PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQE--KAGRGIGD-MAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 773
            Y +    S V+G  IRA +PYIR D+PVV++FRALG+  D+ ILEHI YDF+D ++ME+F+PSLEEA VIQ Q VA DFIG+RGSAVNV + +R+ YA+ +LQ+E LPHVG+    E KK +FLGY+VHKLLMCSLGRL EDDRDHYG KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D G  F +  AIKS+ I++GL+YSLATGNWG +KTA+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQA           KPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG   +PILEFLEEW+ ENL+EI   +I     TK+FVNGNWVGVHR+PN LV+TL   RR +DID EVSV+RD+  +ELR+YTDAGRVCRPLF+VENNRL ++K+H+  L +    ++ W NL+ +GVVE IDTEEEE  M+AMEPKDL  +    S YTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY+SN++ RMDT+A++L+YP+KPLVTTRAME+LHFRELPSGVN IV I  Y+GYNQEDSLIMNQSA+DRGLFRS+F+R   DQE  K+  GIG     +++E FE+P R     +KHG+Y KL+ DGLVAPGTRVSG+D++IGKT+PL     +S   G      K+D+ST +R+HE+GI+D VML+TN EGFKF KVR RN+R+PQIGDKFASRHGQKGTIGMTYRQEDMP++I+G+ PDIIVNPHAIPSRMTI  LIECLLGKV 
Sbjct:  239 YAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTHFRWQNLLTEGVVELIDTEEEEVCMIAMEPKDLRNA---RSLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGIGGGSGFMNSEEFEKPTRATCMRLKHGSYHKLDADGLVAPGTRVSGSDIIIGKTSPLP----SSDENGLEARHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVTPDIIVNPHAIPSRMTIGHLIECLLGKVS 987          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ3_ECTSI0.000e+096.99DNA-directed RNA polymerase subunit beta n=1 Tax=E... [more]
A0A835YQ41_9STRA0.000e+076.21DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
F0YIN3_AURAN0.000e+070.05DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
B8C598_THAPS0.000e+068.01DNA-directed RNA polymerase subunit beta n=2 Tax=B... [more]
A0A1E7ERG7_9STRA0.000e+068.67DNA-directed RNA polymerase subunit beta n=6 Tax=B... [more]
F0YGN2_AURAN0.000e+068.67DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A8J2SZW4_9STRA0.000e+067.82DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A7S3PZE7_9STRA0.000e+069.18DNA-directed RNA polymerase subunit beta n=5 Tax=B... [more]
A0A7S1FRA3_9STRA0.000e+068.49DNA-directed RNA polymerase subunit beta n=2 Tax=C... [more]
A0A024TRP0_9STRA0.000e+067.88DNA-directed RNA polymerase subunit beta n=17 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007646RNA polymerase Rpb2, domain 4PFAMPF04566RNA_pol_Rpb2_4coord: 347..408
e-value: 3.2E-22
score: 78.6
IPR007642RNA polymerase Rpb2, domain 2PFAMPF04561RNA_pol_Rpb2_2coord: 19..163
e-value: 8.5E-41
score: 139.7
IPR037034RNA polymerase Rpb2, domain 2 superfamilyGENE3D3.90.1110.10coord: 4..150
e-value: 2.3E-54
score: 185.8
NoneNo IPR availableGENE3D3.90.1100.10coord: 151..372
e-value: 2.8E-38
score: 133.8
NoneNo IPR availablePANTHERPTHR20856:SF7DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2coord: 13..772
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 19..773
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 482..772
e-value: 3.2E-85
score: 286.6
IPR007645RNA polymerase Rpb2, domain 3PFAMPF04565RNA_pol_Rpb2_3coord: 235..310
e-value: 2.0E-22
score: 79.1
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 481..602
e-value: 3.5E-37
score: 130.0
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 676..773
e-value: 1.6E-30
score: 108.4
IPR007647RNA polymerase Rpb2, domain 5PFAMPF04567RNA_pol_Rpb2_5coord: 429..475
e-value: 1.1E-19
score: 70.7
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 13..772
IPR007121RNA polymerase, beta subunit, conserved sitePROSITEPS01166RNA_POL_BETAcoord: 715..727

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5974contigL-elsbetiae_contig5974:365..11724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5974.14471.1mRNA_L-elsbetiae_contig5974.14471.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5974 365..11724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5974.14471.1 ID=prot_L-elsbetiae_contig5974.14471.1|Name=mRNA_L-elsbetiae_contig5974.14471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=773bp
RSPPPRASSSYFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTND
KAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVG
RNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLE
EDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVV
GTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLR
RLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGL
VKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVN
GNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRV
CRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTM
VAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQ
SAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSG
VNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIG
DMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGK
TTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFK
FCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIV
NPHAIPSRMTIAQLIECLLGKVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007646RNA_pol_Rpb2_4
IPR007642RNA_pol_Rpb2_2
IPR037034RNA_pol_Rpb2_2_sf
IPR007120DNA-dir_RNAP_su2_dom
IPR007645RNA_pol_Rpb2_3
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR007647RNA_pol_Rpb2_5
IPR015712DNA-dir_RNA_pol_su2
IPR007121RNA_pol_bsu_CS