prot_L-elsbetiae_contig5973.14470.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5973.14470.1
Unique Nameprot_L-elsbetiae_contig5973.14470.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length113
Homology
BLAST of mRNA_L-elsbetiae_contig5973.14470.1 vs. uniprot
Match: D7G4A3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A3_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 3.510e-60
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0
Query:    5 FGGAEAASQARSRRVDDLLRSGRVQFAGVPVTREASALLKLHQTLVKHFEHLELHDRGLWSTVVLVLRARSDVYEVQVHVGGPVLVIPEKFSARNLVRFLSEVLLS 110
            FGGAEAASQARSRRVDDLLRSGRVQFAGVPV REA+ALL+LHQTLVKHFEH ELHDRGLWSTVVLVLRARSD YEVQVH GGPVLV PEKFS RNLVRFLSEVLLS
Sbjct:  107 FGGAEAASQARSRRVDDLLRSGRVQFAGVPVYREAAALLRLHQTLVKHFEHFELHDRGLWSTVVLVLRARSDSYEVQVHSGGPVLVFPEKFSERNLVRFLSEVLLS 212          
BLAST of mRNA_L-elsbetiae_contig5973.14470.1 vs. uniprot
Match: D7G1D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D8_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 4.610e-58
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 0
Query:    3 RGFGGAEAASQARSRRVDDLLRSGRVQFAGVPVTREASALLKLHQTLVKHFEHLELHDRGLWSTVVLVLRARSDVYEVQVHVGGPVLVIPEKFSARNLVRFLSEVLLS 110
            R FGGAEA+SQARSRRVDDLLRSGRVQFAGVPV+REA+ALL+LHQTLVKHFEHLELHDRGLWSTVVLVLRARS+ YEVQVH GGPVLV PEKFS R+LVRFLSEVLLS
Sbjct:  224 RRFGGAEASSQARSRRVDDLLRSGRVQFAGVPVSREAAALLRLHQTLVKHFEHLELHDRGLWSTVVLVLRARSESYEVQVHSGGPVLVFPEKFSERSLVRFLSEVLLS 331          
BLAST of mRNA_L-elsbetiae_contig5973.14470.1 vs. uniprot
Match: A0A6H5JN32_9PHAE (DUF4460 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN32_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 6.040e-58
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 0
Query:    3 RGFGGAEAASQARSRRVDDLLRSGRVQFAGVPVTREASALLKLHQTLVKHFEHLELHDRGLWSTVVLVLRARSDVYEVQVHVGGPVLVIPEKFSARNLVRFLSEVLLS 110
            R FGGAEAASQARSRRVDDLLRSGRVQFAGVPV+REA+ALL+LH+TLVKHFEHLELHDRGLWSTVVLVLRARS+ YEVQVH GGPVLV PEKFS RNLVRFLSEVLLS
Sbjct:  288 RRFGGAEAASQARSRRVDDLLRSGRVQFAGVPVSREAAALLRLHRTLVKHFEHLELHDRGLWSTVVLVLRARSESYEVQVHSGGPVLVFPEKFSERNLVRFLSEVLLS 395          
BLAST of mRNA_L-elsbetiae_contig5973.14470.1 vs. uniprot
Match: A0A835YNW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.370e-8
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    2 GRGFGGAEAASQARSRRVDDLLRSGRVQFAGVPVTREASALLKLHQTLVKHFEHLELHDRGLWSTVVLVL 71
            G G  G     +AR+RR +D LRSGRV F GV +  +A AL +LH  LV  +E L L D  LW++  +VL
Sbjct:  233 GAGALGGGGIFEARARRANDFLRSGRVLFRGVALAAQARALRRLHALLVDAYEALRLDDDALWASTAVVL 302          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5973.14470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G4A3_ECTSI3.510e-6092.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1D8_ECTSI4.610e-5889.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN32_9PHAE6.040e-5890.74DUF4460 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNW8_9STRA4.370e-845.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5973contigL-elsbetiae_contig5973:6026..7808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5973.14470.1mRNA_L-elsbetiae_contig5973.14470.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5973 6026..9079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5973.14470.1 ID=prot_L-elsbetiae_contig5973.14470.1|Name=mRNA_L-elsbetiae_contig5973.14470.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp
KGRGFGGAEAASQARSRRVDDLLRSGRVQFAGVPVTREASALLKLHQTLV
KHFEHLELHDRGLWSTVVLVLRARSDVYEVQVHVGGPVLVIPEKFSARNL
VRFLSEVLLSCS*
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