prot_L-elsbetiae_contig5973.14469.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5973.14469.1
Unique Nameprot_L-elsbetiae_contig5973.14469.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length148
Homology
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BLAST of mRNA_L-elsbetiae_contig5973.14469.1 vs. uniprot
Match: A0A6H5JN32_9PHAE (DUF4460 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN32_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.640e-24
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 0 
Query:   55 MLPLIKLVHPDMFAQHPPDVASTNSKSLKDLNTLIDAAEALEAVAAGTKPANGS--VRSPAAPPKLDALYTLVFYHHQTCPPRSSDS 139
            M+PLIKLVHPDMF Q+PPDVASTNSKSLKDLNTLIDAAEAL       KPANGS  VRSPA PP +   Y+L F+H +  P  SSD+
Sbjct:    1 MMPLIKLVHPDMFGQYPPDVASTNSKSLKDLNTLIDAAEALXXXXXXAKPANGSGSVRSPAPPPTVAPFYSLTFFHLKQNP-ASSDN 86
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BLAST of mRNA_L-elsbetiae_contig5973.14469.1 vs. uniprot
Match: D7G1D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D8_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.610e-13
Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MRAFLASSRTRGKVSLPKHGLSACGGGGGGCRSS-----EVQRALSSAARAGGV--SVRKRMLPLIKLVHPDMFAQHPPDVASTNSKSLK 83
            MRA L  +R +G  SLP +G   C  G   C+ +      +    +S A +GGV  SVRKRM+PLIKLVHPDMF Q+PPDVASTNSKSLK
Sbjct:    1 MRAVLMRTR-KGAPSLPSNGCR-CSRGRNACKDTPELLLRLPALSTSTAASGGVGISVRKRMMPLIKLVHPDMFGQYPPDVASTNSKSLK 88
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BLAST of mRNA_L-elsbetiae_contig5973.14469.1 vs. uniprot
Match: A0A835YNW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW8_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 8.120e-5
Identity = 33/79 (41.77%), Postives = 44/79 (55.70%), Query Frame = 0 
Query:   55 MLPLIKLVHPDMFAQHPPDVASTNSKSLKDLNTLIDAAEALEAVAAGTKPANGSVRSPAAPPKLDALYTLVFYHHQTCP 133
            M+PLIKLVHPD FAQ    V+ TN  SL+ LN ++D  +      + T  A+  +R      KL   YTLVFY ++  P
Sbjct:    1 MIPLIKLVHPDFFAQEGATVSDTNESSLQKLNEVLDICQHKLIYGSETTKAS-RMRL-----KLAERYTLVFYQYELEP 73
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5973.14469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JN32_9PHAE1.640e-2467.82DUF4460 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G1D8_ECTSI3.610e-1354.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNW8_9STRA8.120e-541.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028031Domain of unknown function DUF4460PFAMPF14687DUF4460coord: 49..94
e-value: 5.8E-8
score: 32.8
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5973contigL-elsbetiae_contig5973:3074..4553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5973.14469.1mRNA_L-elsbetiae_contig5973.14469.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5973 2967..4553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5973.14469.1 ID=prot_L-elsbetiae_contig5973.14469.1|Name=mRNA_L-elsbetiae_contig5973.14469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp
MRAFLASSRTRGKVSLPKHGLSACGGGGGGCRSSEVQRALSSAARAGGVS
VRKRMLPLIKLVHPDMFAQHPPDVASTNSKSLKDLNTLIDAAEALEAVAA
GTKPANGSVRSPAAPPKLDALYTLVFYHHQTCPPRSSDSSGRGRDSAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028031DUF4460