mRNA_L-elsbetiae_contig5965.14459.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5965.14459.1
Unique NamemRNA_L-elsbetiae_contig5965.14459.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: D7FUN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUN7_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 1.420e-115
Identity = 206/247 (83.40%), Postives = 219/247 (88.66%), Query Frame = 2
Query:   20 DERDGVVEVEMSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGA----TGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDG 748
            D+ DG VEVEMSCGWVLIPFLELVE+ EVKKVRYKLLGGTPFAKTDI+EDEVMTRRYGWRAVLKAMKIEG HK SEVEIKILPV+ LSK KQED+FRLPRNVILS TFVSLVRHYR YAAN LAKRSA GMGNVGFGAGSASSEPVLALFPRLA DPALMMALKNQWE E+RK+HVDGRLGATIS+KL GL +GG  XXL G     TGAAREA LL+AFE+AV+RLWPAFCHIDAQ+ RAS G  G
Sbjct: 1712 DDGDGTVEVEMSCGWVLIPFLELVESHEVKKVRYKLLGGTPFAKTDINEDEVMTRRYGWRAVLKAMKIEGLHKGSEVEIKILPVNALSKAKQEDIFRLPRNVILSDTFVSLVRHYREYAANSLAKRSARGMGNVGFGAGSASSEPVLALFPRLAGDPALMMALKNQWETEMRKTHVDGRLGATISNKLAGLAMGGGGXXLGGGLVGVTGAAREARLLSAFEKAVLRLWPAFCHIDAQRGRASGGNIG 1958          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A835YK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK05_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.100e-54
Identity = 142/322 (44.10%), Postives = 181/322 (56.21%), Query Frame = 2
Query:    8 GGRGDE-RDGVVEVEMSCGWVLIPFLELV-EAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGATGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDGAESYEELESRGQRIRQILDSTDSFHSDTPTNALQRGEGGGGWRGGGGDTLSSVSQEGRVMVAFTLKEVAFDVA 967
            GG GD+   G+VE EMSCGW L+P  EL  E +  ++VRY+L GGTPFA+ DI  +EV TRRYGWRA+LKA +++G  K SE+E+K++P+  L    Q D  RLPRNVI++A+   L+R++R   A  LA R+  G G   FG G A S P LALFPRLAADPAL  AL   W  E      +GR G                    GA G  +      AFE  V+R WPA  H+DA    A      AES+E LE+R +R R +    DSF +  P+ +   G GG G  GGGG          ++  AF+ KEVAFDVA
Sbjct: 1128 GGAGDDIPPGLVETEMSCGWALVPLAELAAETEAGRRVRYQLQGGTPFARADIQREEVQTRRYGWRALLKAARLDGVDKRSELELKVIPLRALPPDAQADALRLPRNVIVAASLAPLLRYHREALARALAARA--GGGGAAFGRGGAVSAPALALFPRLAADPALAAALVALWARE------EGRHGG-------------------GAEGGVK------AFEACVLRAWPALVHVDA----APPPRLRAESFEALEARIKRARALALGGDSFQAGVPSQS--HGGGGLGKEGGGG----------QLYAAFSAKEVAFDVA 1400          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A7S3XN37_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN37_HETAK)

HSP 1 Score: 134 bits (337), Expect = 1.280e-30
Identity = 87/288 (30.21%), Postives = 146/288 (50.69%), Query Frame = 2
Query:   20 DERDGVVEVEMSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGN--VGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGATGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDGAESYEELESRGQRIRQILDSTDSFHS-----DTPTNALQRGEG 862
            +E+    +VEMSCGW  +   ++V   +  +++  + GGTPFA   I  +++  RRYGWRA +K  K+ G  K S++E+KI+PV  L+  ++ED++R+P+N++L  + ++LVR YR YA   +   + +   N   G   G+  SEPVLALFP++  D A+ +AL++ WE E++           +      L                    ++  F+  V+RLWPA+  ++ +K          ESYE ++ R   + Q       FH      DT T   ++ +G
Sbjct:  124 NEKADECQVEMSCGWCKVSMAQIVSMSQTGRIQLDIQGGTPFASESIKPNDIRARRYGWRAAVK--KVAGVKKSSQMELKIIPVHKLAAGQKEDIYRMPKNILLPFSSINLVRLYREYAVVKIHDTN-LNQSNPIAGLAYGTKFSEPVLALFPKMINDQAMQLALRHHWEEELKDL-------LPLQKTETNL--------------------MIEKFQAIVLRLWPAYSTVEGRKDSRVP-----ESYESMQKRAMILMQAGKGAIPFHERSEIRDTSTADNKKADG 376          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A7S3XMQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMQ6_HETAK)

HSP 1 Score: 134 bits (337), Expect = 2.970e-29
Identity = 87/288 (30.21%), Postives = 146/288 (50.69%), Query Frame = 2
Query:   20 DERDGVVEVEMSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGN--VGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGATGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDGAESYEELESRGQRIRQILDSTDSFHS-----DTPTNALQRGEG 862
            +E+    +VEMSCGW  +   ++V   +  +++  + GGTPFA   I  +++  RRYGWRA +K  K+ G  K S++E+KI+PV  L+  ++ED++R+P+N++L  + ++LVR YR YA   +   + +   N   G   G+  SEPVLALFP++  D A+ +AL++ WE E++           +      L                    ++  F+  V+RLWPA+  ++ +K          ESYE ++ R   + Q       FH      DT T   ++ +G
Sbjct:  966 NEKADECQVEMSCGWCKVSMAQIVSMSQTGRIQLDIQGGTPFASESIKPNDIRARRYGWRAAVK--KVAGVKKSSQMELKIIPVHKLAAGQKEDIYRMPKNILLPFSSINLVRLYREYAVVKIHDTN-LNQSNPIAGLAYGTKFSEPVLALFPKMINDQAMQLALRHHWEEELKDL-------LPLQKTETNL--------------------MIEKFQAIVLRLWPAYSTVEGRKDSRVP-----ESYESMQKRAMILMQAGKGAIPFHERSEIRDTSTADNKKADG 1218          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A024G811_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G811_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.500e-12
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 2
Query:   44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESE-VEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEV 532
            VEM C W  IP   L+E +    + R KLLGGT F+  +++EDE+M RRYGWRA     +   T   +  V IK LP+  L +  Q+ V+++P  ++L  + +S+   Y  Y  + L++ S            S++  P L + PR+  +   + +    +E+EV
Sbjct: 1032 VEMVCCWTKIPLYLLLERRTSTFRTREKLLGGTVFSPCEVEEDEIMRRRYGWRAFSNVFR--ATRPPTPIVGIKCLPIKNLPEEYQKCVYKMPPLLLLPYSAISITAEYMMYMNSLLSETSVA----------SSACAPALKILPRIIENNLALSSFSRAFESEV 1184          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A024TWH4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWH4_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.890e-10
Identity = 48/169 (28.40%), Postives = 87/169 (51.48%), Query Frame = 2
Query:   44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASS----EPVLALFPRLAADPALMMALKNQWEAEVR 535
            +EM+C W  +P + L+ +  ++ ++   L GGT     ++DEDE+  RRYGWRA+ KA+K    +   ++ IK L +  LS  ++  + +LP  V++  + V +++ Y     + L+               SASS    EP L LFP++  D     A +  +++++R
Sbjct:  156 IEMTCCWAKVPLVNLLSSTVDIIRLEEPLYGGTILNPVELDEDEISRRRYGWRAIAKALK---PYTPPKLSIKSLQIPKLSAQEKLQIAQLPATVVVPYSAVPILQDYMHLMVSVLSNPQ------------SASSVHTCEPALKLFPKILDDHIAYEAFRAVFDSDMR 309          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A6A4ZID5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZID5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.040e-10
Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 2
Query:   44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVR 535
            +EM+C W  +P + L+    ++ ++   L GGT     ++DEDE+  RRYGWRA+ KA+K    +    + IK L +  LS  ++  + +LP  V+   + V +++ Y     + L+        N+   +   + EP L LFP++  D  +  A +  ++ E+R
Sbjct:   49 IEMTCCWAKVPLVNLLSTTVDIIRLEEPLFGGTILNPVELDEDEISRRRYGWRAIAKALK---PYTPPMLSIKSLQIPKLSVQEKLQIAQLPSTVVAPYSAVPMLQEYMLLMMSVLS--------NLQSPSSVHTCEPALKLFPKILDDHIVYEAFRLVFDNEMR 202          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A1V9ZHV0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZHV0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.290e-10
Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 2
Query:   44 VEMSCGWVLIPFLELVEA--QEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKS 541
            VEM+C W  IP  +LV    QEV +    L GGT     ++DEDE++ RR GWRA+ KA K    +   +++IK L +S L    +  +  LP  ++   + V +++ Y A     L K     + N        + EP L LFPR+  +  +    +N +  E+R S
Sbjct:  430 VEMTCCWAKIPLTQLVSKTKQEVIRFDVPLFGGTFLNPVELDEDEILRRRSGWRALAKAFK---QYTPPQLQIKSLQISNLPLQDKLCISELPSTIVAPYSSVPIIQDYMA-----LMKSVISTLDNPSH---VYTCEPALKLFPRILDNDEVYEVFRNAFNEEMRSS 586          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: W4FZG5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZG5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.430e-9
Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 2
Query:   44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVR 535
            +EM+C W  +P + L+    ++ ++   L GGT     ++DEDE+  RRYGWRA+ KA+K    +    + IK L +  LS  ++  + +LP  V+   + V +++ Y     + L+        N+   +   + EP L LFP++  D  +  A +  ++ E+R
Sbjct: 2033 IEMTCCWAKVPLVNLLSTTVDIIRLEEPLFGGTILNPVELDEDEISRRRYGWRAIAKALK---PYTPPMLSIKSLQIPKLSVQEKLQIAQLPSTVVAPYSAVPMLQEYMLLMMSVLS--------NLQSPSSVHTCEPALKLFPKILDDHIVYEAFRLVFDNEMR 2186          
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: F0W0F4_9STRA (Uncharacterized protein AlNc14C4G597 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0F4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.780e-9
Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = 2
Query:   44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVR 535
            VEM C W  IP   L+E +    + R KLLGGT F   ++++DE+M RRYGWRA    ++         V IK  P+  LS   Q+ V+++P  ++L  + +S+   Y  Y  + L+  S          +   +  P L + PR+      + +    +E+E +
Sbjct: 1046 VEMVCCWTKIPLYLLLERRTSTFRTREKLLGGTVFIPCEVEKDEIMRRRYGWRAFSNVLRAPRPPTPM-VGIKCSPIKQLSDEYQKFVYQMPPLLLLPYSAISITAEYMMYMHSLLSDTS--------IASSVVACAPALKILPRIIESNLALTSFCRAFESETK 1201          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUN7_ECTSI1.420e-11583.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YK05_9STRA1.100e-5444.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XN37_HETAK1.280e-3030.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XMQ6_HETAK2.970e-2930.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A024G811_9STRA6.500e-1231.52Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A024TWH4_9STRA1.890e-1028.40Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A4ZID5_9STRA3.040e-1027.88Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1V9ZHV0_9STRA5.290e-1031.55Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
W4FZG5_9STRA2.430e-927.88Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
F0W0F4_9STRA3.780e-929.09Uncharacterized protein AlNc14C4G597 n=1 Tax=Albug... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5965contigL-elsbetiae_contig5965:929..4319 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.0
Seed ortholog evalue2.1e-102
Seed eggNOG ortholog2880.D7FUN7
Preferred nameMLC2
KEGG koko:K02183
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
Hectar predicted targeting categorysignal peptide
GOsGO:0000142,GO:0000910,GO:0000916,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005826,GO:0005856,GO:0005933,GO:0005935,GO:0005938,GO:0006996,GO:0007010,GO:0007049,GO:0008092,GO:0008150,GO:0009987,GO:0015629,GO:0016043,GO:0016459,GO:0016460,GO:0017022,GO:0022402,GO:0030029,GO:0030036,GO:0030427,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031032,GO:0032153,GO:0032155,GO:0032506,GO:0032991,GO:0036213,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044837,GO:0045159,GO:0051301,GO:0061640,GO:0070938,GO:0071840,GO:0071944,GO:0099568,GO:0110085
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0027@2759
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Exons7
Model size1693
Cds size921
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816646.429107-UTR-L-elsbetiae_contig5965:928..16511622816646.429107-UTR-L-elsbetiae_contig5965:928..1651Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5965 929..1651 -
1691683709.438978-UTR-L-elsbetiae_contig5965:928..16511691683709.438978-UTR-L-elsbetiae_contig5965:928..1651Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5965 929..1651 -
1622816646.528446-UTR-L-elsbetiae_contig5965:4270..43191622816646.528446-UTR-L-elsbetiae_contig5965:4270..4319Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5965 4271..4319 -
1691683709.5367243-UTR-L-elsbetiae_contig5965:4270..43191691683709.5367243-UTR-L-elsbetiae_contig5965:4270..4319Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5965 4271..4319 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816646.4406872-CDS-L-elsbetiae_contig5965:1651..16721622816646.4406872-CDS-L-elsbetiae_contig5965:1651..1672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 1652..1672 -
1691683709.452302-CDS-L-elsbetiae_contig5965:1651..16721691683709.452302-CDS-L-elsbetiae_contig5965:1651..1672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 1652..1672 -
1622816646.4511197-CDS-L-elsbetiae_contig5965:1901..21041622816646.4511197-CDS-L-elsbetiae_contig5965:1901..2104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 1902..2104 -
1691683709.4637642-CDS-L-elsbetiae_contig5965:1901..21041691683709.4637642-CDS-L-elsbetiae_contig5965:1901..2104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 1902..2104 -
1622816646.4645407-CDS-L-elsbetiae_contig5965:2301..25451622816646.4645407-CDS-L-elsbetiae_contig5965:2301..2545Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 2302..2545 -
1691683709.4753134-CDS-L-elsbetiae_contig5965:2301..25451691683709.4753134-CDS-L-elsbetiae_contig5965:2301..2545Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 2302..2545 -
1622816646.4768484-CDS-L-elsbetiae_contig5965:3069..32761622816646.4768484-CDS-L-elsbetiae_contig5965:3069..3276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 3070..3276 -
1691683709.485861-CDS-L-elsbetiae_contig5965:3069..32761691683709.485861-CDS-L-elsbetiae_contig5965:3069..3276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 3070..3276 -
1622816646.4895585-CDS-L-elsbetiae_contig5965:3591..37201622816646.4895585-CDS-L-elsbetiae_contig5965:3591..3720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 3592..3720 -
1691683709.4972475-CDS-L-elsbetiae_contig5965:3591..37201691683709.4972475-CDS-L-elsbetiae_contig5965:3591..3720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 3592..3720 -
1622816646.501248-CDS-L-elsbetiae_contig5965:3921..40171622816646.501248-CDS-L-elsbetiae_contig5965:3921..4017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 3922..4017 -
1691683709.513483-CDS-L-elsbetiae_contig5965:3921..40171691683709.513483-CDS-L-elsbetiae_contig5965:3921..4017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 3922..4017 -
1622816646.5160868-CDS-L-elsbetiae_contig5965:4249..42701622816646.5160868-CDS-L-elsbetiae_contig5965:4249..4270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 4250..4270 -
1691683709.5256443-CDS-L-elsbetiae_contig5965:4249..42701691683709.5256443-CDS-L-elsbetiae_contig5965:4249..4270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5965 4250..4270 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5965.14459.1prot_L-elsbetiae_contig5965.14459.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5965 1652..4270 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5965.14459.1

>prot_L-elsbetiae_contig5965.14459.1 ID=prot_L-elsbetiae_contig5965.14459.1|Name=mRNA_L-elsbetiae_contig5965.14459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWR
AVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVS
LVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALM
MALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGGGGGLAGATGAAREA
CLLAAFERAVMRLWPAFCHIDAQKRRASAGEDGAESYEELESRGQRIRQI
LDSTDSFHSDTPTNALQRGEGGGGWRGGGGDTLSSVSQEGRVMVAFTLKE
VAFDVA*
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mRNA from alignment at L-elsbetiae_contig5965:929..4319-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5965.14459.1 ID=mRNA_L-elsbetiae_contig5965.14459.1|Name=mRNA_L-elsbetiae_contig5965.14459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3391bp|location=Sequence derived from alignment at L-elsbetiae_contig5965:929..4319- (Laminarionema elsbetiae ELsaHSoW15)
GGGGGGAGGAGGTCGAGGCGACGAGAGAGATGGGGTGGTGGAGGTCGAGA TGTCGTGCGGCTGGGTGCTGGTGAGAAGAGGGATGGATGGATGGATGGAT GGATGGATGGTACGGGGGTTCGGTGGGAACAAAGTGGGTTGCAGTCGAGG AGGATTCGTACTTTGGCTTGGTGTTCATCTTGTGCCACTGCCGTTTTGGG GACGCATTCTAGCTCAACCTGAAGCAAGTTGTCGTGGATTCCGAGTGCCG GTGATTAAGCAACGATGCGCCTCCTTCGAACGTGGCCGCATTCGTCGACC AGATCCCGTTCTTGGAGCTAGTGGAGGCTCAAGAGGTGAAGAAAGTGCGG TACAAGCTCTTGGGGGGCACGCCGTTTGCGAAGACGGACATTGACGAGGT GAGGGAGAACGGACCTCACCACGCCGCGGATGTGCTCCCGAAGATGCGGC AGGGGTATTGGTGCAGATAACGACAGAGGCCCCGGGGGGTGCACGTATGG CATAGGTAGACAAACGTGAAAGAGGTATATATGTATGTATGTGTGTACAA GCGCAGCCAATCCCTAAAACAGCGTAGCTTCTATCCTCTTCTGTCGCAGG ACGAAGTGATGACGCGGCGGTACGGCTGGCGAGCGGTGCTGAAAGCGATG AAGATAGAGGGGACGCACAAGGAGTCCGAGGTGGAAATAAAAATCCTCCC AGTCAGCACCCTCAGCAAGGTCAAGCAGGCACGTCGACTGCTCTGGAGTC ACTAATACACTTGTGTACGGCGTACCTGTTAAAATGGAAAAACTTCAGGT TATGCATCAAGAGACGCGGACTTTAAACCGTTTGGGAGAGAGTTGTGGGT TCGAAACACCCTACAAGTATGACCTGACGCGCGGTACAAGGCAACATTCC TCTGTCTTGCCATGTAGCCGAAACCTCTTTTGTGATCCTCGTTCAGGATT CCGTACCCTTCACGGCGGGTAAATAAAACGTCACGTCACGGCCATTGGCA TGGTAACGAGTGCCCCTCAAATCAACACGACGCACTACCGCAGGAAGACG TTTTTCGACTGCCGAGAAACGTGATCCTGTCGGCTACTTTCGTCTCCTTG GTCCGGCACTACCGAGCATACGCCGCCAACTGCCTGGCCAAGCGCAGCGC CATGGGCATGGGCAACGTCGGCTTCGGTGCCGGTTCGGCGTCTTCGGAGC CCGTCTTGGCTCTGTTTCCCCGCCTGGCGGCAGACCCCGCGTTGATGATG GTGCGTGCTCAATTGCTCAATGCCAAACACAGGGCTAGCCTGCACGACGT GGAAACCGAGGCTTGCCGGCATCTGTTCAAGTACCCCTATCTGAGTAGAA AAAATGTACCATAGAGGCATGCTGTTGCTGTGGTGTTCGAGGTCAAGCAC CGGCCAGCGCGCGCTGGCTGACTGGTTTTAGCATCATTAGTGCGTACATA CCGGTTGTTTTGTTCTCTGTTTTCTTTCGCTTGGGGCGGTACTGCCGTAC ACCCGTCGTTGATAGTGCTGAAAGCTCGCAAGCAAGGCAAAAAATATGCC AAGGCGAAGAGAAAACAGTGGCGGCTGATTCGCACATTGATCATGGGAAA TGAAACGGTCCCCACTCCCCACAGCTGGTGGGATTGACCGACTCTGTAAC GCACGAACCGTTCCGCCTCCGTTCCATCCCCGCCCCCGCCCCTCTCTCCT TTCCCTGCCTCCCATTCCTCTTTCCTTGCTCCTCTCGCTGACGCACACAC GAAAACAAACCAACACACAAGCAGGCCCTGAAGAACCAGTGGGAGGCTGA AGTCCGCAAGAGTCACGTCGATGGCAGGCTCGGCGCCACCATTTCCAGCA AACTGGTCGGCCTTGGCCTCGGCGGGGGCGGAGGTGGGCTCGCGGGAGCT ACCGGGGCCGCCAGAGAGGCGTGCCTCCTGGCGGCGTTTGAGAGGGCCGT GATGCGGCTGTGGCCGGCATTTTGCCACATCGACGCCCAGAAGAGGAGGG CGTCGGCAGGGGAAGACGGTGAGAAGGCACCTCGCTTCTTGATCGTCGAC ACACCGGTGGTTAGCCGCGAAGTCCTGTGTGTAGATATGTTTAGTGTGGT ACGGGACCAACGCTTAGAGGGGAGGAAGTCTTCAGCAGCAGTATATCTAC GGTGAAACTCGTGGGGACCGTTTTTACAAACCTACGCCTACATACCTGGT GTTGCCCGCTCTCAGGAGCCGAATCATACGAAGAGCTGGAGAGCCGCGGC CAGCGTATTCGCCAGATCCTCGACAGCACCGACTCCTTCCACAGCGACAC GCCAACGAACGCTCTTCAAAGGGGAGAGGGGGGCGGAGGCTGGAGGGGCG GTGGCGGGGATACGCTCTCGTCTGTTTCCCAAGAAGGTCGTGTGATGGTG GCCTTCACGCTGAAGGAGGTGAGGGTGGCCGTTCATCGACTAGACTATCT ATACCTAGATATACGCGATAAAGACAGCTCCCCACGAATTAAAGTTTGAA AAAGGTCACTTTGGGAGGGCGCGCACTGCTTTGAAAGTTCTGATTCGATT TTTTTGACACACCTCCGCCGTGAAACCCGATCGAAAGGTTATTGTTCTCT TGGTGCTATCTCCGTCATCCGATTGTTTCCCTGCCGCGTGCGTGCAGGTG GCTTTCGACGTGGCGTGACAGCAAACAAGGGGGCCTGCATTATGGACGAC ACGGCGAAAATGCGTCCGATTTGCTTATCTAAACTATCTATCTATCTATC CAGTAGTCTAGCTAGATAGACCTTTTATATATATAGTACGGAGTATCTTG CATCCGAGGAAAAACGGAAAAATCGTTATTTTGGACTTGTAGCAAAGCAT TTTTCGTTGGCACGGTTGCAGCGATCACTTAGAGCGACCTCCAGCTGTAC GTATGTATGTATTTCAGCGTGCCTCGTCTAGATCTACCTAGACAACTCTG TACGTGCTATTTCCAAATCTCGAGCAGTGCACCGGCAAAAAGCACGATGT AGGTATACTGCACAGCAGCCCTATACAAAAGAACATTACAATACATTTTT CTATATACTGTTGTCTAGAGCAGTCAGTTGTTCTATTGTGTGTACTCGTT TAATGTATAGTCTGGCCCATAGAAAGAGTCTGTGCATGTACATACAAGTC TGATCTTCAGAAAATCTTTGACATTCTTCACACTCGGCAAGATGGGCGTG GTGGGTGGCTTCAAATCGGCAGCAAATAAAAAACTTCGTGACTGATCACG ACGTGTTATTTTGGTTATGACCGGTCATGCCCGGTCACGAAAAGTTTTTT TTGTGCATGCATGCCCGATTGTCACGATAAGTTTTTTGTTTCGGTCATGA CCGGTCATGAAACCTGTTTTCTTCGATTATGACTCATGGCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5965:929..4319-

>mRNA_L-elsbetiae_contig5965.14459.1 ID=mRNA_L-elsbetiae_contig5965.14459.1|Name=mRNA_L-elsbetiae_contig5965.14459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig5965:929..4319- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTGCGGCTGGGTGCTGATGTCGTGCGGCTGGGTGCTGATCCCGTT
CTTGGAGCTAGTGGAGGCTCAAGAGGTGAAGAAAGTGCGGTACAAGCTCT
TGGGGGGCACGCCGTTTGCGAAGACGGACATTGACGAGATCCCGTTCTTG
GAGCTAGTGGAGGCTCAAGAGGTGAAGAAAGTGCGGTACAAGCTCTTGGG
GGGCACGCCGTTTGCGAAGACGGACATTGACGAGGACGAAGTGATGACGC
GGCGGTACGGCTGGCGAGCGGTGCTGAAAGCGATGAAGATAGAGGGGACG
CACAAGGAGTCCGAGGTGGAAATAAAAATCCTCCCAGTCAGCACCCTCAG
CAAGGTCAAGCAGGACGAAGTGATGACGCGGCGGTACGGCTGGCGAGCGG
TGCTGAAAGCGATGAAGATAGAGGGGACGCACAAGGAGTCCGAGGTGGAA
ATAAAAATCCTCCCAGTCAGCACCCTCAGCAAGGTCAAGCAGGAAGACGT
TTTTCGACTGCCGAGAAACGTGATCCTGTCGGCTACTTTCGTCTCCTTGG
TCCGGCACTACCGAGCATACGCCGCCAACTGCCTGGCCAAGCGCAGCGCC
ATGGGCATGGGCAACGTCGGCTTCGGTGCCGGTTCGGCGTCTTCGGAGCC
CGTCTTGGCTCTGTTTCCCCGCCTGGCGGCAGACCCCGCGTTGATGATGG
AAGACGTTTTTCGACTGCCGAGAAACGTGATCCTGTCGGCTACTTTCGTC
TCCTTGGTCCGGCACTACCGAGCATACGCCGCCAACTGCCTGGCCAAGCG
CAGCGCCATGGGCATGGGCAACGTCGGCTTCGGTGCCGGTTCGGCGTCTT
CGGAGCCCGTCTTGGCTCTGTTTCCCCGCCTGGCGGCAGACCCCGCGTTG
ATGATGGCCCTGAAGAACCAGTGGGAGGCTGAAGTCCGCAAGAGTCACGT
CGATGGCAGGCTCGGCGCCACCATTTCCAGCAAACTGGTCGGCCTTGGCC
TCGGCGGGGGCGGAGGTGGGCTCGCGGGAGCTACCGGGGCCGCCAGAGAG
GCGTGCCTCCTGGCGGCGTTTGAGAGGGCCGTGATGCGGCTGTGGCCGGC
ATTTTGCCACATCGACGCCCAGAAGAGGAGGGCGTCGGCAGGGGAAGACG
GCCCTGAAGAACCAGTGGGAGGCTGAAGTCCGCAAGAGTCACGTCGATGG
CAGGCTCGGCGCCACCATTTCCAGCAAACTGGTCGGCCTTGGCCTCGGCG
GGGGCGGAGGTGGGCTCGCGGGAGCTACCGGGGCCGCCAGAGAGGCGTGC
CTCCTGGCGGCGTTTGAGAGGGCCGTGATGCGGCTGTGGCCGGCATTTTG
CCACATCGACGCCCAGAAGAGGAGGGCGTCGGCAGGGGAAGACGGAGCCG
AATCATACGAAGAGCTGGAGAGCCGCGGCCAGCGTATTCGCCAGATCCTC
GACAGCACCGACTCCTTCCACAGCGACACGCCAACGAACGCTCTTCAAAG
GGGAGAGGGGGGCGGAGGCTGGAGGGGCGGTGGCGGGGATACGCTCTCGT
CTGTTTCCCAAGAAGGTCGTGTGATGGTGGCCTTCACGCTGAAGGAGGAG
CCGAATCATACGAAGAGCTGGAGAGCCGCGGCCAGCGTATTCGCCAGATC
CTCGACAGCACCGACTCCTTCCACAGCGACACGCCAACGAACGCTCTTCA
AAGGGGAGAGGGGGGCGGAGGCTGGAGGGGCGGTGGCGGGGATACGCTCT
CGTCTGTTTCCCAAGAAGGTCGTGTGATGGTGGCCTTCACGCTGAAGGAG
GTGGCTTTCGACGTGGCGTGAGTGGCTTTCGACGTGGCGTGA
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