prot_L-elsbetiae_contig5963.14458.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5963.14458.1
Unique Nameprot_L-elsbetiae_contig5963.14458.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length415
Homology
BLAST of mRNA_L-elsbetiae_contig5963.14458.1 vs. uniprot
Match: D7FVU5_ECTSI (MPN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU5_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 5.370e-116
Identity = 244/417 (58.51%), Postives = 286/417 (68.59%), Query Frame = 0
Query:    1 LLHALVSKTQHRTKVGTIEVTAFQARDTSEAMDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGPGSGSSTTPLSDALERVVRLQDTLFGEERTGYLAALRQSNASAGGAEMGEGGQLMTEPLDADSPKDE-------GVDLLSKLFCSAVYSKSLAALSGDSAVPLAQTLRSQLTILRNRAALLDQRSRELKSRLTPAELQEAAAAANNRLREPCSAGLGAFQAKHEGELDIPRADALRFAREGGTLRKEGRIIQSNAAVTVRIFREYA---RPQAELGQQXXXXXXXXXXXXXXXXXXXXXXSDIWGGLETRDGMADGGGVWMAEVAGRRKTLIGLRAAPAXXXXXXXXTGSMFSRRSRSKPPQLGLLLDSRESGEELLLCDDQESFRMWLGVAAAVFPS 407
            L+ ++ S+ +H +KVGTIEVTAFQARDTSE MDV  XXXXXXXXXXXXXXXXXXXXXXXX                LHGPGSGSSTTPLSDALERVVRLQDTLFGEER GYLAALRQ++A  G            EP DA+SP+D        G+DLLSK+FCSAVYSKSLAALSGDSAVPLAQTLRSQL IL+NRAA L+Q   EL++ LTP EL+ A A+A+ +LR PCSAG+GAFQAKHEGELDIPRADALRFAR+GG LR++  ++ +N AV VR+FREYA   R  A +  +                            +E  D    GG +W+AE+AG+RKTL+GLRAA        XX      R         GL++++RE GEE+LLCDDQESFR+WLGVAAAVFPS
Sbjct:  102 LIFSVFSEDKH-SKVGTIEVTAFQARDTSEPMDVDAXXXXXXXXXXXXXXXXXXXXXXXXRTEVALS---------LHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAMVG----------EEEPFDAESPQDTRTRRRGGGIDLLSKIFCSAVYSKSLAALSGDSAVPLAQTLRSQLNILQNRAAALEQHQVELRALLTPGELEGALASASAKLRAPCSAGIGAFQAKHEGELDIPRADALRFARQGGPLRRQRILMSANTAVNVRVFREYATQARSSAAIADR----------------------------VEISDSREAGGALWVAEIAGKRKTLLGLRAAAPAADGSNXXXXXXXER---------GLVIETREGGEEVLLCDDQESFRLWLGVAAAVFPS 461          
BLAST of mRNA_L-elsbetiae_contig5963.14458.1 vs. uniprot
Match: A0A6H5LD19_9PHAE (MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD19_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 1.920e-107
Identity = 228/419 (54.42%), Postives = 270/419 (64.44%), Query Frame = 0
Query:    1 LLHALVSKTQHRTKVGTIEVTAFQARDTSEAMDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGPGSGSSTTPLSDALERVVRLQDTLFGEERTGYLAALRQSNASAGGAEMGEGGQLMTEPLDADSPKD-------EGVDLLS-KLFCSAVYSKSLAALSGDSAVPLAQTLRSQLTILRNRAALLDQRSRELKSRLTPAELQEAAAAANNRLREPCSAGLGAFQAKHEGELDIPRADALRFAREGGTLRKEGRIIQSNAAVTVRIFREYARPQAELGQQXXXXXXXXXXXXXXXXXXXXXXSDIWGGLETRDGMADGGGVWMAEVAGRRKTLIGLRAA-PAXXXXXXXXTGSMFSRRSRSKPPQLGLLLDSRESGEELLLCDDQESFRMWLGVAAAVFPSMTA 410
            L+ ++ S+ +H +KVGTIEVTAFQARDTS+ MDV     XXXXXXXXXXXXXXXX                     LHGPGSGSSTTPLSDALERVVRLQDTLFGEER GYLAALRQ++A  G            E  D +SP+D       EG D L+ K F   VYSKSL ALSGDSAVPLAQTLRSQL IL+NRAA L+QR  EL++ LTP EL+EA A+A  +LR PCSAG+GAFQAKHEGELDIPRADALRF R GG LR++  ++  N AV VR+FREYA+                              + I   +ET D    G  +W+ E+AG++KTL+GLRAA PA                  SK  + GL++++RE GEE+LLCDDQ+SFR+WLGVAAAVFPS TA
Sbjct:  130 LIFSVFSEDKH-SKVGTIEVTAFQARDTSDPMDVDAAVGXXXXXXXXXXXXXXXXRTEVALS--------------LHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAMVG----------EEESFDTESPQDTRTRRRGEGEDRLALKAFLLGVYSKSLVALSGDSAVPLAQTLRSQLKILQNRAAALEQRQLELRASLTPGELEEALASARAKLRAPCSAGIGAFQAKHEGELDIPRADALRFGRHGGPLRRQRILMSGNTAVNVRVFREYAKRATS-------------------------SAAIADRVETSDSREAGDALWVVEIAGKKKTLLGLRAAAPAADGC------------GTSKQQERGLVIETREGGEEVLLCDDQDSFRLWLGVAAAVFPSGTA 486          
BLAST of mRNA_L-elsbetiae_contig5963.14458.1 vs. uniprot
Match: A0A836CFJ1_9STRA (MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 8.530e-13
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0
Query:   80 PGSGSSTTPLSDALERVVRLQDTLFGEERTGYLAALRQSNASAGGAEMGEGGQLMTEPLDADSPKDEGVDLLSKLFCSAVYSKSLAALSGDSAVPLAQTLRSQLTILRNRAALLDQRSRELKSRL 204
            P  G S  P++DAL  +  LQ+TLF EER  YL+AL+Q                    L A + +D   DLL +++CSAVYSKSL +L G+S +PL QTL++    L  +A  L+Q +  L+SR+
Sbjct:  140 PPDGGSAVPIADALNVLCGLQNTLFEEERAAYLSALQQHRG-----------------LGATATQD---DLLEQVYCSAVYSKSLTSLLGESMLPLLQTLKAHAKNLHAKADALEQSNAALQSRI 244          
BLAST of mRNA_L-elsbetiae_contig5963.14458.1 vs. uniprot
Match: A0A7S2CPT3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPT3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.630e-5
Identity = 42/107 (39.25%), Postives = 56/107 (52.34%), Query Frame = 0
Query:   88 PLSDALERVVRLQDTLFGEERTGYLAALRQSNASAGGAEMGEGGQLMTEPLDADSPKDEGVDLLSKLFCSAVYSKSLAALSGDSAVPLAQTLRSQLTILRNRAALLD 194
            PL+ AL  +VRLQDTLFGEER  +L A   S              L ++P    SP          L  SAVY K+L +L  DSA+PLA T+++    ++ R ALL+
Sbjct:  152 PLTAALASLVRLQDTLFGEERGSFLRACAPS--------------LNSKP----SP-------FKMLHSSAVYQKALCSLLQDSALPLAHTVKATQASMKTRQALLE 233          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5963.14458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVU5_ECTSI5.370e-11658.51MPN domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LD19_9PHAE1.920e-10754.42MPN domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CFJ1_9STRA8.530e-1340.00MPN domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2CPT3_9STRA5.630e-539.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040749BRCC36, C-terminal helical domainPFAMPF18110BRCC36_Ccoord: 92..200
e-value: 3.4E-27
score: 94.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5963contigL-elsbetiae_contig5963:1696..11500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5963.14458.1mRNA_L-elsbetiae_contig5963.14458.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5963 1696..11500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5963.14458.1 ID=prot_L-elsbetiae_contig5963.14458.1|Name=mRNA_L-elsbetiae_contig5963.14458.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=415bp
LLHALVSKTQHRTKVGTIEVTAFQARDTSEAMDVDIDAGGGAGRGFHGGG
GGGGGSSGGGGGGGGAGWARTEVALSLHGPGSGSSTTPLSDALERVVRLQ
DTLFGEERTGYLAALRQSNASAGGAEMGEGGQLMTEPLDADSPKDEGVDL
LSKLFCSAVYSKSLAALSGDSAVPLAQTLRSQLTILRNRAALLDQRSREL
KSRLTPAELQEAAAAANNRLREPCSAGLGAFQAKHEGELDIPRADALRFA
REGGTLRKEGRIIQSNAAVTVRIFREYARPQAELGQQQQQQQQQQPQQQQ
QQPAALSSSSDIWGGLETRDGMADGGGVWMAEVAGRRKTLIGLRAAPAAA
AAAEEETGSMFSRRSRSKPPQLGLLLDSRESGEELLLCDDQESFRMWLGV
AAAVFPSMTAGDLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040749BRCC36_C