mRNA_L-elsbetiae_contig5962.14457.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: D7G7G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G7_ECTSI) HSP 1 Score: 222 bits (566), Expect = 1.590e-63 Identity = 102/137 (74.45%), Postives = 120/137 (87.59%), Query Frame = 3 Query: 18 KTLDTAVREAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNETLSHQWDVYGYAAGLYKHRCNQMLHTRDLGLCEVPVAPAHYTLTDLEREELGRQQHEE 428 KTL +EAK++LDTFWLVGV+EQY+GF+AVL+ MMDP KSER++W+RY VGKYNTSPQGAGKVLAAI PALVQ+FNETLSHQW+VY YA LYKHRC+QMLHTRDL +CEVPVAP+ YTLT+LERE L ++ H E Sbjct: 226 KTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCHQMLHTRDLDMCEVPVAPSQYTLTELERESLYQEMHPE 362
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: A0A6H5KGA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA9_9PHAE) HSP 1 Score: 218 bits (556), Expect = 1.180e-61 Identity = 101/137 (73.72%), Postives = 118/137 (86.13%), Query Frame = 3 Query: 18 KTLDTAVREAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNETLSHQWDVYGYAAGLYKHRCNQMLHTRDLGLCEVPVAPAHYTLTDLEREELGRQQHEE 428 KTL +EA ++LDTFWLVGV+EQY+GF+AVL+ MMDP KSER++W+RY VGKYNTSPQGAGKVLAAI PALVQ+FNETLSHQW+VY YA LYKHRC QMLHTRDL +CEVPVAP+ YTLT+LERE L ++ H E Sbjct: 284 KTLSAGAQEAMDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCRQMLHTRDLDMCEVPVAPSQYTLTELERESLYQEIHPE 420
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: A0A6H5JGJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ5_9PHAE) HSP 1 Score: 106 bits (265), Expect = 4.190e-22 Identity = 52/119 (43.70%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 24 LDTAVREAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNETLSHQWDVYGYAAGLYKHRCNQMLHT-RDLGLCEVPVAPAHY 377 L+ AV +A E+L+TFWLVG+VEQY GF+ VL+ ++DP + ++WQ Y ++NTSP + VLAA+ P LV++FN +L+ QW VY A L+ RC ++L + LC V + + Y Sbjct: 210 LEVAVTKAIENLETFWLVGLVEQYAGFVEVLELLLDPERKHVDVWQTYSTRQFNTSPLRSRDVLAALDPQLVREFNGSLALQWRVYEKAVALWDLRCREVLPVAKHEELCTVALPFSEY 328
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: A0A6H5JAP0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAP0_9PHAE) HSP 1 Score: 104 bits (259), Expect = 3.950e-21 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 33 AVREAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQ-RYKVGKYNTSPQGAGKVLAAISPALVQQFNETLSHQWDVYGYAAGLYKHRCNQML-HTRDLGLCEVPVAPAHYT 380 A E +L TFWLVGVVEQY GF+AVL+ ++DP +LW+ + + K N SP + VLA++ P LV+QFN TLS+QW +YG+A L++ RC ++L + C V P YT Sbjct: 235 ATVEGARNLKTFWLVGVVEQYGGFVAVLRALLDPDGLHDDLWRPQLEEHKLNASPVQSSNVLASLDPQLVKQFNSTLSYQWLMYGHAVRLFRARCQEVLPEYQHWEFCSVQQPPVEYT 352
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: D8LHE4_ECTSI (Similar to heparin sulfate O-sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE4_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 1.030e-18 Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 24 LDTAVREAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNET-LSHQWDVYGYAAGLYKHRCNQMLHTRDL-GLCEVP 359 + V+ A +HL+TF++VGVVEQY+GFI VLK +DP +S +LW K N SP +G VL+ I P LV++FN T L QW VY A L+ RC ++L + LC VP Sbjct: 156 MSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAAAVGVKDNGSPVHSGDVLSGIDPDLVREFNATTLGRQWQVYDVALKLWDRRCREILPAEEHEALCSVP 269
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: D8LIP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP4_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 3.260e-18 Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 45 AKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNETLSHQWDVYGYAAGLYKHRCNQMLHTRD-LGLCEVP 359 A EHL FW+VGVVEQY GF+ VL++ +DP LW+ N SP + VL I P LV++FN TLS QW VY A L+ RC ++L +D LC VP Sbjct: 235 AAEHLSNFWVVGVVEQYAGFVNVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVP 340
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: A0A6H5KCZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ6_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.640e-17 Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 24 LDTAVREAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNET-LSHQWDVYGYAAGLYKHRCNQMLHTRDL-GLCEVP 359 + V+ A +HL+TF++VGVVEQY+GFI VLK +DP +S +LW N SP +G VL+ I P LV++FN T L+ QW VY A L+ RC ++L D LC VP Sbjct: 266 MSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAAAVGVLDNGSPVHSGDVLSGIDPDLVREFNATALARQWQVYDVALKLWDSRCREILPPEDHEALCSVP 379
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: D7FJ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ87_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 3.770e-14 Identity = 47/108 (43.52%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 42 EAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNET-LSHQWDVYGYAAGLYKHRCNQMLHTRDLG-LCEVP 359 E+ EHL+TF +VGVVEQY GF+ VLK+ +DP +W + N SP + VL I P LV+ +NET L QW VY A L+ RC ++L D C+VP Sbjct: 158 ESVEHLNTFLVVGVVEQYEGFVEVLKHTLDPGLENPSVWTTGAKVQNNKSPVSSRDVLRNIDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPRSDHERYCDVP 265
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Match: A0A6H5KPF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF0_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 5.540e-13 Identity = 47/108 (43.52%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 42 EAKEHLDTFWLVGVVEQYRGFIAVLKYMMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNET-LSHQWDVYGYAAGLYKHRCNQMLHTRDLG-LCEVP 359 E+ EHL+TF +VGVVEQY GFI VLK+ +DP +W + N SP + VL + P LV+ +NET L QW VY A L+ RC ++L D C+VP Sbjct: 267 ESVEHLNTFLVVGVVEQYEGFIEVLKHTLDPGLENPSVWTTGANVQNNKSPVPSRDVLRNMDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPPSDHERYCDVP 374 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5962.14457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5962.14457.1 >prot_L-elsbetiae_contig5962.14457.1 ID=prot_L-elsbetiae_contig5962.14457.1|Name=mRNA_L-elsbetiae_contig5962.14457.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MMDPLKSERELWQRYKVGKYNTSPQGAGKVLAAISPALVQQFNETLSHQWback to top mRNA from alignment at L-elsbetiae_contig5962:7789..11143- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5962.14457.1 ID=mRNA_L-elsbetiae_contig5962.14457.1|Name=mRNA_L-elsbetiae_contig5962.14457.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3355bp|location=Sequence derived from alignment at L-elsbetiae_contig5962:7789..11143- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5962:7789..11143- >mRNA_L-elsbetiae_contig5962.14457.1 ID=mRNA_L-elsbetiae_contig5962.14457.1|Name=mRNA_L-elsbetiae_contig5962.14457.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig5962:7789..11143- (Laminarionema elsbetiae ELsaHSoW15)back to top |