prot_L-elsbetiae_contig5958.14448.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5958.14448.1
Unique Nameprot_L-elsbetiae_contig5958.14448.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length228
Homology
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BLAST of mRNA_L-elsbetiae_contig5958.14448.1 vs. uniprot
Match: D8LES7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES7_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 2.000e-75
Identity = 116/135 (85.93%), Postives = 124/135 (91.85%), Query Frame = 0 
Query:    1 MAAAVASSIAAGQGPAYVLCALPYRTDAEREDWGLDTALAIVEEAVEAFDPPRMQARPVRTSWPSGLQEKAKALDTFELMRSAYFTRSSNSLPDLSEPVPRIETNFYMWLSCRKQQWRKHRADKRVSRKVTPEED 135
            MAAAVA++IA+GQGPAYVLCALPYRTDAEREDWGLDTALAIVEEAVEAFDP RMQARP RTSWP  LQ+KAKALDT ELMRSAYF R S+SLPD+SEPVP+IE NFYMWLS RKQQWRKHR DKRV RK+TPEED
Sbjct:    1 MAAAVATNIASGQGPAYVLCALPYRTDAEREDWGLDTALAIVEEAVEAFDPQRMQARPARTSWPPELQDKAKALDTIELMRSAYFARGSSSLPDVSEPVPKIEDNFYMWLSLRKQQWRKHRRDKRVGRKLTPEED 135
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BLAST of mRNA_L-elsbetiae_contig5958.14448.1 vs. uniprot
Match: A0A6H5KM78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM78_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 6.960e-75
Identity = 175/219 (79.91%), Postives = 190/219 (86.76%), Query Frame = 0 
Query:    1 MAAAVASSIAAGQGPAYVLCALPYRTDAEREDWGLDTALAIVEEAVEAFDPPRMQARPVRTSWPSGLQEKAKALDTFELMRSAYFTRSSNSLPDLSEPVPRIETNFYMWLSCRKQQWRKHRADKRVSRKVTPEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKHGLPSVPTNAGSGVGAG--SGYPDKNYQHHLQQQ 217
            MAAAVA++I +G+GPAYVLCALPYRTDAEREDWGLDTALAIVEEAVEAFDP RM+ARP RTSWP  LQ+KAKALDT ELMRSAYF R S+SLPD+SEPVP+IE NFYMWLS RKQQWRKHR DKR  RK+TPEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARKHG   + +N+ SG      +  PD NYQHHLQ+Q
Sbjct:    1 MAAAVATNITSGEGPAYVLCALPYRTDAEREDWGLDTALAIVEEAVEAFDPQRMKARPARTSWPPELQDKAKALDTIELMRSAYFARGSSSLPDVSEPVPKIEDNFYMWLSLRKQQWRKHRRDKRAGRKLTPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARKHGGRGLASNSSSGFSRDGVAELPDNNYQHHLQRQ 219
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5958.14448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LES7_ECTSI2.000e-7585.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM78_9PHAE6.960e-7579.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5958contigL-elsbetiae_contig5958:7082..9187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5958.14448.1mRNA_L-elsbetiae_contig5958.14448.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5958 7054..9187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5958.14448.1 ID=prot_L-elsbetiae_contig5958.14448.1|Name=mRNA_L-elsbetiae_contig5958.14448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp
MAAAVASSIAAGQGPAYVLCALPYRTDAEREDWGLDTALAIVEEAVEAFD
PPRMQARPVRTSWPSGLQEKAKALDTFELMRSAYFTRSSNSLPDLSEPVP
RIETNFYMWLSCRKQQWRKHRADKRVSRKVTPEEDFPRWLKQRKWHWKSS
KMEREYLNTPPLEEDFFAWLADRKKIWRLQRLARKHGLPSVPTNAGSGVG
AGSGYPDKNYQHHLQQQGGGAAGAAGAA
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